(Linear) MAP of: ./Fgr-C_02_A04_T3.seq check: 5667 from: 1 to: 563 Fgr-C_02_A04_T3 0 0 0 1 563 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI | | GAATTCGGCACGAGGTTCAGCCTTCCACCCCCACAACAACAACCATCATCAACAACTTCATCCACATCTTCACAAGAATCATCAACAATGGCTCGCACTA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCAAGTCGGAAGGTGGGGGTGTTGTTGTTGGTAGTAGTTGTTGAAGTAGGTGTAGAAGTGTTCTTAGTAGTTGTTACCGAGCGTGAT a E F G T R F S L P P P Q Q Q P S S T T S S T S S Q E S S T M A R T K - b N S A R G S A F H P H N N N H H Q Q L H P H L H K N H Q Q W L A L - c I R H E V Q P S T P T T T T I I N N F I H I F T R I I N N G S H * - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N P V L N L R G G G C C C G D D V V E D V D E C S D D V I A R V - e I R C S T * G E V G V V V V M M L L K M W M K V L I M L L P E C * - f F E A R P E A K W G W L L L W * * C S * G C R * L F * * C H S A S - BcgI AceIII BcgI EciI | | | | AGCAGACCGCCCGAAAGTCCACTGGTGGCAAGGCCCCTCGCAAGCAGCTCGCTTCCAAGGCTGCCCGCAAGTCCGCCCCCTCTACCGGAGGTGTCAAGAA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TCGTCTGGCGGGCTTTCAGGTGACCACCGTTCCGGGGAGCGTTCGTCGAGCGAAGGTTCCGACGGGCGTTCAGGCGGGGGAGATGGCCTCCACAGTTCTT a Q T A R K S T G G K A P R K Q L A S K A A R K S A P S T G G V K K - b S R P P E S P L V A R P L A S S S L P R L P A S P P P L P E V S R S - c A D R P K V H W W Q G P S Q A A R F Q G C P Q V R P L Y R R C Q E - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d L C V A R F D V P P L A G R L C S A E L A A R L D A G E V P P T L F - e A S R G F T W Q H C P G E C A A R K W P Q G C T R G R * R L H * S - f L L G G S L G S T A L G R A L L E S G L S G A L G G G R G S T D L - KpnI | GCCTCACCGCTACAAGCCCGGTACCGTCGCTCTCCGTGAGATCCGTCGCTACCAGAAGTCCACTGAGCTTCTCATCCGAAAGCTCCCCTTCCAGCGTCTC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CGGAGTGGCGATGTTCGGGCCATGGCAGCGAGAGGCACTCTAGGCAGCGATGGTCTTCAGGTGACTCGAAGAGTAGGCTTTCGAGGGGAAGGTCGCAGAG a P H R Y K P G T V A L R E I R R Y Q K S T E L L I R K L P F Q R L - b L T A T S P V P S L S V R S V A T R S P L S F S S E S S P S S V S - c A S P L Q A R Y R R S P * D P S L P E V H * A S H P K A P L P A S R - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d G * R * L G P V T A R R S I R R * W F D V S S R M R F S G K W R R - e A E G S C A R Y R R E G H S G D S G S T W Q A E * G F A G R G A D - f L R V A V L G T G D S E T L D T A V L L G S L K E D S L E G E L T E - EciI EcoNI BsmBI Bpu10I AhdI BpmI | BsaXI BsmBI | | | | | | | | | GTCCGTGAGATTGCTCAGGACTTCAAGTCTGATCTCCGATTCCAGTCCTCCGCCATCGGTGCTCTCCAGGAGTCTGTCGAGTCTTACCTCGTCTCCCTCT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CAGGCACTCTAACGAGTCCTGAAGTTCAGACTAGAGGCTAAGGTCAGGAGGCGGTAGCCACGAGAGGTCCTCAGACAGCTCAGAATGGAGCAGAGGGAGA a V R E I A Q D F K S D L R F Q S S A I G A L Q E S V E S Y L V S L F - b S V R L L R T S S L I S D S S P P P S V L S R S L S S L T S S P S - c P * D C S G L Q V * S P I P V L R H R C S P G V C R V L P R L P L - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d T R S I A * S K L D S R R N W D E A M P A R W S D T S D * R T E R - e R G H S Q E P S * T Q D G I G T R R W R H E G P T Q R T K G R R G R - f D T L N S L V E L R I E S E L G G G D T S E L L R D L R V E D G E - EarI EcoRV AceIII | | | TCGAGGACACCAACCTGTGCGCCATCCACGCCAAGCGTGTTACCATCCAGTCCAAGGATATCCAGCTCGCCCGCCGCCTTCGTGGTGAGCGCAACTAAGC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AGCTCCTGTGGTTGGACACGCGGTAGGTGCGGTTCGCACAATGGTAGGTCAGGTTCCTATAGGTCGAGCGGGCGGCGGAAGCACCACTCGCGTTGATTCG a E D T N L C A I H A K R V T I Q S K D I Q L A R R L R G E R N * A - b S R T P T C A P S T P S V L P S S P R I S S S P A A F V V S A T K R - c R G H Q P V R H P R Q A C Y H P V Q G Y P A R P P P S W * A Q L S - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d K S S V L R H A M W A L R T V M W D L S I W S A R R R R P S R L * A - e R P C W G T R W G R W A H * W G T W P Y G A R G G G E H H A C S L - f E L V G V Q A G D V G L T N G D L G L I D L E G A A K T T L A V L - EcoRV BcgI BcgI | | | | GAATGGCTNTGGGAGGATAACGAATTTTTTGCTTTGACACGAAGGATATCATGGTTAGGGGAT 501 ---------+---------+---------+---------+---------+---------+--- 563 CTTACCGANACCCTCCTATTGCTTAAAAAACGAAACTGTGCTTCCTATAGTACCAATCCCCTA a N G ? G R I T N F L L * H E G Y H G * G - b M A ? G G * R I F C F D T K D I M V R G - c E W L W E D N E F F A L T R R I S W L G D - 501 ---------+---------+---------+---------+---------+---------+--- 563 d F P ? P L I V F K K S Q C S P Y * P * P I - e S H S ? S S L S N K A K V R L I D H N P S - f R I A ? P P Y R I K Q K S V F S I M T L P - Enzymes that do cut: AceIII AhdI BcgI BpmI Bpu10I BsaXI BsmBI BssSI EarI EciI EcoNI EcoRI EcoRV KpnI Enzymes that do not cut: AatII AflII AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BclI BfiI BglI BglII BplI Bpu1102I BsaI BsaBI BsbI BseRI BsgI BsiWI BsmI BspEI BspGI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI Eco47III Eco57I FseI FspI HgiEII HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI