(Linear) MAP of: ./Fgr-C_02_A05_T3.seq check: 132 from: 1 to: 536 Fgr-C_02_A05_T3 0 0 0 1 536 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI | | GAATTCGGCACGAGGGTCTTGACCCTCTCACATTTCCTCAACTTATTCTCACTCACTCACACTCACCAACAAACAAACAATCACAATCACAACATACACA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCCAGAACTGGGAGAGTGTAAAGGAGTTGAATAAGAGTGAGTGAGTGTGAGTGGTTGTTTGTTTGTTAGTGTTAGTGTTGTATGTGT a E F G T R V L T L S H F L N L F S L T H T H Q Q T N N H N H N I H T - b N S A R G S * P S H I S S T Y S H S L T L T N K Q T I T I T T Y T - c I R H E G L D P L T F P Q L I L T H S H S P T N K Q S Q S Q H T H - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N P V L T K V R E C K R L K N E S V * V * W C V F L * L * L M C - e I R C S P R S G R V N G * S I R V * E C E G V F L C D C D C C V C - f F E A R P D Q G E * M E E V * E * E S V S V L L C V I V I V V Y V - EarI BsaXI | BglI | | | CAAACCACCTCACCAAACACTCAATCCATGCCCTACCTCTCATCTGGAAACAACTACCTCTTCTCCCCATACACCTCACAAAACCACGCCACAATGGCAC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTTTGGTGGAGTGGTTTGTGAGTTAGGTACGGGATGGAGAGTAGACCTTTGTTGATGGAGAAGAGGGGTATGTGGAGTGTTTTGGTGCGGTGTTACCGTG a N H L T K H S I H A L P L I W K Q L P L L P I H L T K P R H N G T - b Q T T S P N T Q S M P Y L S S G N N Y L F S P Y T S Q N H A T M A P - c K P P H Q T L N P C P T S H L E T T T S S P H T P H K T T P Q W H - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d V F W R V L C E I W A R G R M Q F C S G R R G M C R V F G R W L P V - e L G G * W V S L G H G V E * R S V V V E E G W V G * L V V G C H C - f C V V E G F V * D M G * R E D P F L * R K E G Y V E C F W A V I A - Bst1107I BseRI | BpmI | | AhdI BseRI | | | | | CCTCAGTATACATCCTCCTCCAGCGCGACACAGAGTCCACAGTCATAATCTCCTCAGTCTATCTCGACCTTCAAGACGCCAACGCCGCGCTTCTCCACCT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GGAGTCATATGTAGGAGGAGGTCGCGCTGTGTCTCAGGTGTCAGTATTAGAGGAGTCAGATAGAGCTGGAAGTTCTGCGGTTGCGGCGCGAAGAGGTGGA a L S I H P P P A R H R V H S H N L L S L S R P S R R Q R R A S P P - b S V Y I L L Q R D T E S T V I I S S V Y L D L Q D A N A A L L H L - c P Q Y T S S S S A T Q S P Q S * S P Q S I S T F K T P T P R F S T S - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d R L I C G G G A R C L T W L * L R R L R D R G E L R W R R A E G G - e G * Y V D E E L A V C L G C D Y D G * D I E V K L V G V G R K E V - f G E T Y M R R W R S V S D V T M I E E T * R S R * S A L A A S R W R - SalI BcgI | | CGCACAAGAAGCAGGCGTCGACCCTGCAACTGCCAAGCCTACTGCCGATGCCGGTTCCGAACAGCCCTCGCTTGTCAAGGAGCCTCTGCGATGGGAGGCC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GCGTGTTCTTCGTCCGCAGCTGGGACGTTGACGGTTCGGATGACGGCTACGGCCAAGGCTTGTCGGGAGCGAACAGTTCCTCGGAGACGCTACCCTCCGG a R T R S R R R P C N C Q A Y C R C R F R T A L A C Q G A S A M G G R - b A Q E A G V D P A T A K P T A D A G S E Q P S L V K E P L R W E A - c H K K Q A S T L Q L P S L L P M P V P N S P R L S R S L C D G R P - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d R V L L L R R G Q L Q W A * Q R H R N R V A R A Q * P A E A I P P - e E C L F C A D V R C S G L R S G I G T G F L G R K D L L R Q S P L G - f A C S A P T S G A V A L G V A S A P E S C G E S T L S G R R H S A - BcgI EarI | | GCCGATGGAACTGCCGCCTGNGTTGAGCGCCATGCTGTGACAAATCGCAAGACGCACGCCTCTGGCTCTGCTGGCGCTGCTGATAAGCCTGNGTTGAAGA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CGGCTACCTTGACGGCGGACNCAACTCGCGGTACGACACTGTTTAGCGTTCTGCGTGCGGAGACCGAGACGACCGCGACGACTATTCGGACNCAACTTCT a R W N C R L ? * A P C C D K S Q D A R L W L C W R C * * A ? V E E - b A D G T A A ? V E R H A V T N R K T H A S G S A G A A D K P ? L K R - c P M E L P P ? L S A M L * Q I A R R T P L A L L A L L I S L ? * R - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d R R H F Q R R ? Q A G H Q S L D C S A R R Q S Q Q R Q Q Y A Q T S S - e G I S S G G ? N L A M S H C I A L R V G R A R S A S S I L R ? Q L - f A S P V A A Q T S R W A T V F R L V C A E P E A P A A S L G ? N F - GGAATGATAGTCGGTTGTATGTCAACGATGATGATG 501 ---------+---------+---------+------ 536 CCTTACTATCAGCCAACATACAGTTGCTACTACTAC a E * * S V V C Q R * * - b N D S R L Y V N D D D - c G M I V G C M S T M M M - 501 ---------+---------+---------+------ 536 d S H Y D T T H * R H H H - e P I I T P Q I D V I I I - f L F S L R N Y T L S S S - Enzymes that do cut: AhdI BcgI BglI BpmI BsaXI BseRI BssSI Bst1107I EarI EcoRI SalI Enzymes that do not cut: AatII AceIII AflII AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BclI BfiI BglII BplI Bpu10I Bpu1102I BsaI BsaBI BsbI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI EciI Eco47III Eco57I EcoNI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI