(Linear) MAP of: ./Fgr-C_02_A07_T3.seq check: 9055 from: 1 to: 563 Fgr-C_02_A07_T3 0 0 0 1 563 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI MscI XcmI | | | | GAATTCGGCACGAGGCCAAGGATGGCCAGACCCGTGAGCACGCTCTCCTTGCCTACACCCTTGGTGTCAAGAACCTCATTGTTGCCATCAACAAGATGGA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCGGTTCCTACCGGTCTGGGCACTCGTGCGAGAGGAACGGATGTGGGAACCACAGTTCTTGGAGTAACAACGGTAGTTGTTCTACCT a E F G T R P R M A R P V S T L S L P T P L V S R T S L L P S T R W T - b N S A R G Q G W P D P * A R S P C L H P W C Q E P H C C H Q Q D G - c I R H E A K D G Q T R E H A L L A Y T L G V K N L I V A I N K M D - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N P V L G L I A L G T L V S E K G V G K T D L V E N N G D V L H - e I R C S A L S P W V R S C A R R A * V R P T L F R M T A M L L I S - f F E A R P W P H G S G H A R E G Q R C G Q H * S G * Q Q W * C S P - DraIII PflMI BsaI EarI | | | CACCACCAAGTGGTCTGAGGCCCGTTACCAGGAGATCATCAAGGAGACCTCTTCTTTCATCAAGAAGGTCGGCTACAACCCCAAGGCTGTCGCTTTCGTC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTGGTGGTTCACCAGACTCCGGGCAATGGTCCTCTAGTAGTTCCTCTGGAGAAGAAAGTAGTTCTTCCAGCCGATGTTGGGGTTCCGACAGCGAAAGCAG a P P S G L R P V T R R S S R R P L L S S R R S A T T P R L S L S S - b H H Q V V * G P L P G D H Q G D L F F H Q E G R L Q P Q G C R F R P - c T T K W S E A R Y Q E I I K E T S S F I K K V G Y N P K A V A F V - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d V G G L P R L G T V L L D D L L G R R E D L L D A V V G L S D S E D - e V V L H D S A R * W S I M L S V E E K M L F T P * L G L A T A K T - f C W W T T Q P G N G P S * * P S R K K * * S P R S C G W P Q R K R - BspEI | CCCATCTCCGGTTTCAACGGTGACAACATGCTTACTGCCTCCACCAACTGCCCCTGGTACAAGGGTTGGGAGCGTGAGATCAAGTCTGGCAAGCTCTCCG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GGGTAGAGGCCAAAGTTGCCACTGTTGTACGAATGACGGAGGTGGTTGACGGGGACCATGTTCCCAACCCTCGCACTCTAGTTCAGACCGTTCGAGAGGC a P S P V S T V T T C L L P P P T A P G T R V G S V R S S L A S S P - b H L R F Q R * Q H A Y C L H Q L P L V Q G L G A * D Q V W Q A L R - c P I S G F N G D N M L T A S T N C P W Y K G W E R E I K S G K L S G - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d G D G T E V T V V H K S G G G V A G P V L T P L T L D L R A L E G - e G M E P K L P S L M S V A E V L Q G Q Y L P Q S R S I L D P L S E - f G W R R N * R H C C A * Q R W W S G R T C P N P A H S * T Q C A R R - EcoNI Bce83I BpmI BsaXI | | | | GAAAGACCCTCCTTGAGGCCATTGACTCCATCGAGCCCCCCAAGCGTCCCAACGACAAGCCCCTCCGACTTCCCCTCCAGGATGTCTACAAGATTGGCGG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CTTTCTGGGAGGAACTCCGGTAACTGAGGTAGCTCGGGGGGTTCGCAGGGTTGCTGTTCGGGGAGGCTGAAGGGGAGGTCCTACAGATGTTCTAACCGCC a E R P S L R P L T P S S P P S V P T T S P S D F P S R M S T R L A V - b K D P P * G H * L H R A P Q A S Q R Q A P P T S P P G C L Q D W R - c K T L L E A I D S I E P P K R P N D K P L R L P L Q D V Y K I G G - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S L G E K L G N V G D L G G L T G V V L G E S K G E L I D V L N A - e P F V R R S A M S E M S G G L R G L S L G R R S G R W S T * L I P P - f F S G G Q P W Q S W R A G W A D W R C A G G V E G G P H R C S Q R - EagI BsaXI | | TATTGGAACGGTTCCTGTCGGCCGTATCGAGACTGGTATCATCAAGCCCGGTATGGTCGTTACCTTCGCTCCTTCCAACGTCACCACTGAAGTCAAGTCC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 ATAACCTTGCCAAGGACAGCCGGCATAGCTCTGACCATAGTAGTTCGGGCCATACCAGCAATGGAAGCGAGGAAGGTTGCAGTGGTGACTTCAGTTCAGG a L E R F L S A V S R L V S S S P V W S L P S L L P T S P L K S S P - b Y W N G S C R P Y R D W Y H Q A R Y G R Y L R S F Q R H H * S Q V R - c I G T V P V G R I E T G I I K P G M V V T F A P S N V T T E V K S - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d T N S R N R D A T D L S T D D L G T H D N G E S R G V D G S F D L G - e I P V T G T P R I S V P I M L G P I T T V K A G E L T V V S T L D - f Y Q F P E Q R G Y R S Q Y * * A R Y P R * R R E K W R * W Q L * T - BssSI Eco57I | AceIII Psp1406I | | | | GTTGAGATGCACCACGAGCAGCTCACTGAGGGACAGCCCGGTGACAACGTTGGTTTCAACGTG 501 ---------+---------+---------+---------+---------+---------+--- 563 CAACTCTACGTGGTGCTCGTCGAGTGACTCCCTGTCGGGCCACTGTTGCAACCAAAGTTGCAC a L R C T T S S S L R D S P V T T L V S T - b * D A P R A A H * G T A R * Q R W F Q R - c V E M H H E Q L T E G Q P G D N V G F N V - 501 ---------+---------+---------+---------+---------+---------+--- 563 d N L H V V L L E S L S L G T V V N T E V H - e T S I C W S C S V S P C G P S L T P K L T - f R Q S A G R A A * Q P V A R H C R Q N * R - Enzymes that do cut: AceIII Bce83I BpmI BsaI BsaXI BspEI BssSI DraIII EagI EarI Eco57I EcoNI EcoRI MscI PflMI Psp1406I XcmI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BcgI BclI BfiI BglI BglII BplI Bpu10I Bpu1102I BsaBI BsbI BseRI BsgI BsiWI BsmI BsmBI BspGI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DrdI DrdII EciI Eco47III EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PinAI PmeI PmlI PshAI PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XhoI XmnI