(Linear) MAP of: ./Fgr-C_02_A09_T3.seq check: 9342 from: 1 to: 326 Fgr-C_02_A09_T3 0 0 0 1 326 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI DraI EarI | | | GAATTCGCACAGCTTAACACCCTTTTTAAACACTTCCTTCCACCACCAAACAATCTTCACAATGGCTGGCGACTGTGGCTGCTCTGGTGCCTCTTCTTGC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCGTGTCGAATTGTGGGAAAAATTTGTGAAGGAAGGTGGTGGTTTGTTAGAAGTGTTACCGACCGCTGACACCGACGAGACCACGGAGAAGAACG a E F A Q L N T L F K H F L P P P N N L H N G W R L W L L W C L F L Q - b N S H S L T P F L N T S F H H Q T I F T M A G D C G C S G A S S C - c I R T A * H P F * T L P S T T K Q S S Q W L A T V A A L V P L L A - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N A C S L V R K L C K R G G G F L R * L P Q R S H S S Q H R K K - e I R V A * C G K * V S G E V V L C D E C H S A V T A A R T G R R A - f F E C L K V G K K F V E K W W W V I K V I A P S Q P Q E P A E E Q - BclI HindIII | | AACTGCGGCTCTAGCTGCTCTTGCTCTGGCTGCGGCAAATAAACAACTTGATCTTTGATCATTCGGATACCACTTGTTCTAGGCCCAAGCTTGGGTCAAG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TTGACGCCGAGATCGACGAGAACGAGACCGACGCCGTTTATTTGTTGAACTAGAAACTAGTAAGCCTATGGTGAACAAGATCCGGGTTCGAACCCAGTTC a L R L * L L L L W L R Q I N N L I F D H S D T T C S R P K L G S R - b N C G S S C S C S G C G K * T T * S L I I R I P L V L G P S L G Q D - c T A A L A A L A L A A A N K Q L D L * S F G Y H L F * A Q A W V K - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d C S R S * S S K S Q S R C I F L K I K S * E S V V Q E L G L S P D L - e V A A R A A R A R A A A F L C S S R Q D N P Y W K N * A W A Q T L - f L Q P E L Q E Q E P Q P L Y V V Q D K I M R I G S T R P G L K P * - EciI RcaI HindIII | | | ATACATCCTTTGACGACGAATCACGGACGGAGTTATGAAGGGCGGAGTTGAGATCATGATGTGATTGGGATATGCGCTTGGATAGTTAGCTACAGATTAA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TATGTAGGAAACTGCTGCTTAGTGCCTGCCTCAATACTTCCCGCCTCAACTCTAGTACTACACTAACCCTATACGCGAACCTATCAATCGATGTCTAATT a Y I L * R R I T D G V M K G G V E I M M * L G Y A L G * L A T D * - b T S F D D E S R T E L * R A E L R S * C D W D M R L D S * L Q I K - c I H P L T T N H G R S Y E G R S * D H D V I G I C A W I V S Y R L S - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d Y M R Q R R I V S P T I F P P T S I M I H N P Y A S P Y N A V S * - e I C G K V V F * P R L * S P R L Q S * S T I P I H A Q I T L * L N - f S V D K S S S D R V S N H L A S N L D H H S Q S I R K S L * S C I L - GCTTAAATACTACCCTTGTGCTGAGT 301 ---------+---------+------ 326 CGAATTTATGATGGGAACACGACTCA a A * I L P L C * - b L K Y Y P C A E - c L N T T L V L S - 301 ---------+---------+------ 326 d A * I S G K H Q T - e L K F V V R T S L - f S L Y * G Q A S - Enzymes that do cut: BclI DraI EarI EciI EcoRI HindIII RcaI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BfiI BglI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII BssSI Bst1107I BstEII BstXI Bsu36I ClaI DraIII DrdI DrdII EagI Eco47III Eco57I EcoNI EcoRV FseI FspI HgiEII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI