(Linear) MAP of: ./Fgr-C_02_A10_T3.seq check: 1459 from: 1 to: 688 Fgr-C_02_A10_T3 0 0 0 1 688 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI StuI BstEII HgiEII DrdI NarI | | | | | | | GAATTCGGCACGAGGGAACAGCAAGGCCTTTGAGGTCACCATCGTCGGTCCCGAAGCCAAGGTCATCTCGGACCAGGGTGTCGTCGTTGGCGCCCAGATC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCCTTGTCGTTCCGGAAACTCCAGTGGTAGCAGCCAGGGCTTCGGTTCCAGTAGAGCCTGGTCCCACAGCAGCAACCGCGGGTCTAG a E F G T R E Q Q G L * G H H R R S R S Q G H L G P G C R R W R P D H - b N S A R G N S K A F E V T I V G P E A K V I S D Q G V V V G A Q I - c I R H E G T A R P L R S P S S V P K P R S S R T R V S S L A P R S - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I R C S P V A L G K L D G D D T G F G L D D R V L T D D N A G L D - e F E A R P F L L A K S T V M T P G S A L T M E S W P T T T P A W I - f N P V L S C C P R Q P * W R R D R L W P * R P G P H R R Q R G S - EcoRV Bce83I | | ACCTACAAGGAGGCACACGACCGTCTTGAGGACTTTGATATCCTCGTCGTCGTCGGTGGTAACTCCAAGGAGGTTGTCGCCAAAGAGCTTCAACCCCTCT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TGGATGTTCCTCCGTGTGCTGGCAGAACTCCTGAAACTATAGGAGCAGCAGCAGCCACCATTGAGGTTCCTCCAACAGCGGTTTCTCGAAGTTGGGGAGA a L Q G G T R P S * G L * Y P R R R R W * L Q G G C R Q R A S T P L - b T Y K E A H D R L E D F D I L V V V G G N S K E V V A K E L Q P L S - c P T R R H T T V L R T L I S S S S S V V T P R R L S P K S F N P S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d G V L L C V V T K L V K I D E D D D T T V G L L N D G F L K L G E - e V * L S A C S R R S S K S I R T T T P P L E L S T T A L S S * G R - f * R C P P V R G D Q P S Q Y G R R R R H Y S W P P Q R W L A E V G R - Eco57I NruI PinAI BclI | BsrBI | BsgI SgrAI EarI | | | | | | | CCCTGATCACCGACTTCTCAGAGCTTCAGAAGCGTGATCCCGCTCGCGAGCGCACGATCCTCTCTATCTGCACCGGTGCCCTCTTCCTTGGCAAGCAGGG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GGGACTAGTGGCTGAAGAGTCTCGAAGTCTTCGCACTAGGGCGAGCGCTCGCGTGCTAGGAGAGATAGACGTGGCCACGGGAGAAGGAACCGTTCGTCCC a P D H R L L R A S E A * S R S R A H D P L Y L H R C P L P W Q A G - b L I T D F S E L Q K R D P A R E R T I L S I C T G A L F L G K Q G - c P * S P T S Q S F R S V I P L A S A R S S L S A P V P S S L A S R A - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d G Q D G V E * L K L L T I G S A L A R D E R D A G T G E E K A L L - e E R I V S K E S S * F R S G A R S R V I R E I Q V P A R K R P L C P - f G S * R S R L A E S A H D R E R A C S G R * R C R H G R G Q C A P - SspI BpmI | | CATCCTCTCTGGCTTGTCTGCCACCACCCACCCCGATTACCTTACTTCATTTGAGAATATTTGCAGCGATGCTGCTACCGTAAACCTCCAGGAGCGTACC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GTAGGAGAGACCGAACAGACGGTGGTGGGTGGGGCTAATGGAATGAAGTAAACTCTTATAAACGTCGCTACGACGATGGCATTTGGAGGTCCTCGCATGG a H P L W L V C H H P P R L P Y F I * E Y L Q R C C Y R K P P G A Y R - b I L S G L S A T T H P D Y L T S F E N I C S D A A T V N L Q E R T - c S S L A C L P P P T P I T L L H L R I F A A M L L P * T S R S V P - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d A D E R A Q R G G G V G I V K S * K L I N A A I S S G Y V E L L T G - e M R E P K D A V V W G S * R V E N S F I Q L S A A V T F R W S R V - f C G R Q S T Q W W G G R N G * K M Q S Y K C R H Q * R L G G P A Y - BspMI EciI | | GATGTGGTAGAGGACGCTCGTTATGTTGTCAACAACCTGCGATTCGATCTCGGGGAGGACGAGAGCCCATACATCCGCCGCAAGTCCGATGCTGGTCAGG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CTACACCATCTCCTGCGAGCAATACAACAGTTGTTGGACGCTAAGCTAGAGCCCCTCCTGCTCTCGGGTATGTAGGCGGCGTTCAGGCTACGACCAGTCC a C G R G R S L C C Q Q P A I R S R G G R E P I H P P Q V R C W S G - b D V V E D A R Y V V N N L R F D L G E D E S P Y I R R K S D A G Q G - c M W * R T L V M L S T T C D S I S G R T R A H T S A A S P M L V R - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d I H Y L V S T I N D V V Q S E I E P L V L A W V D A A L G I S T L - e S T T S S A R * T T L L R R N S R P S S S L G Y M R R L D S A P * - f R H P L P R E N H Q * C G A I R D R P P R S G M C G G C T R H Q D P - AatII BsbI DraIII MfeI DrdI | | | | | GACGTCGCCCTTCGGCAGCCCGAAAGGGAAGCATGTCGTTCAAGGACTCCAACACACGCCGTGAGTCAATTGTTCGTCGTGCCGCCATGCGACTTGGTGG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CTGCAGCGGGAAGCCGTCGGGCTTTCCCTTCGTACAGCAAGTTCCTGAGGTTGTGTGCGGCACTCAGTTAACAAGCAGCACGGCGGTACGCTGAACCACC a T S P F G S P K G K H V V Q G L Q H T P * V N C S S C R H A T W W - b R R P S A A R K G S M S F K D S N T R R E S I V R R A A M R L G G - c D V A L R Q P E R E A C R S R T P T H A V S Q L F V V P P C D L V V - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d S T A R R C G S L S A H R E L V G V C A T L * N N T T G G H S K T - e P R R G E A A R F P L M D N L S E L V R R S D I T R R A A M R S P P - f V D G K P L G F P F C T T * P S W C V G H T L Q E D H R W A V Q H - BsaI BspEI AceIII Eco47III | | | | TCTCCGTGTGGTGACATCCGGAGGTGTCAGCTCTGGCATTGATGCTGCTCTGTATCTTGTCAGCGCTCTGATTGATGATGCTACTTCG 601 ---------+---------+---------+---------+---------+---------+---------+---------+-------- 688 AGAGGCACACCACTGTAGGCCTCCACAGTCGAGACCGTAACTACGACGAGACATAGAACAGTCGCGAGACTAACTACTACGATGAAGC a S P C G D I R R C Q L W H * C C S V S C Q R S D * * C Y F - b L R V V T S G G V S S G I D A A L Y L V S A L I D D A T S - c S V W * H P E V S A L A L M L L C I L S A L * L M M L L - 601 ---------+---------+---------+---------+---------+---------+---------+---------+-------- 688 d T E T H H C G S T D A R A N I S S Q I K D A S Q N I I S S R - e R R T T V D P P T L E P M S A A R Y R T L A R I S S A V E - f D G H P S M R L H * S Q C Q H Q E T D Q * R E S Q H H * K - Enzymes that do cut: AatII AceIII Bce83I BclI BpmI BsaI BsbI BsgI BspEI BspMI BsrBI BssSI BstEII DraIII DrdI EarI EciI Eco47III Eco57I EcoRI EcoRV HgiEII MfeI NarI NruI PinAI SgrAI SspI StuI Enzymes that do not cut: AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BcgI BfiI BglI BglII BplI Bpu10I Bpu1102I BsaBI BsaXI BseRI BsiWI BsmI BsmBI BspGI BspLU11I BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DrdII EagI EcoNI FseI FspI HindIII HpaI KpnI MluI MscI NcoI NdeI NgoAIV NheI NotI NsiI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SwaI Tth111I VspI XbaI XcmI XhoI XmnI