(Linear) MAP of: ./Fgr-C_02_A11_T3.seq check: 5283 from: 1 to: 659 Fgr-C_02_A11_T3 0 0 0 1 659 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. BcgI BcgI | EcoRI BssSI BspMI BcgI EarI BglI | | XhoI | | | | | | | | | GAATTCGGCACGAGGTCAAGACCTGCTACACCTCCACTGGCTGTGCCGAAGAGGATGCCGCCCGCGAGGCTCACTATACCCTCGAGCGATGTGCCGAACT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCAGTTCTGGACGATGTGGAGGTGACCGACACGGCTTCTCCTACGGCGGGCGCTCCGAGTGATATGGGAGCTCGCTACACGGCTTGA a E F G T R S R P A T P P L A V P K R M P P A R L T I P S S D V P N S - b N S A R G Q D L L H L H W L C R R G C R P R G S L Y P R A M C R T - c I R H E V K T C Y T S T G C A E E D A A R E A H Y T L E R C A E L - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N P V L D L G A V G G S A T G F L I G G A L S V I G E L S T G F - e I R C S T L V Q * V E V P Q A S S S A A R S A * * V R S R H A S S - f F E A R P * S R S C R W Q S H R L P H R G R P E S Y G R A I H R V - BcgI NgoAIV AceIII | Eco47III Eco57I SgrAI | | | | | CGCAAAGGCTGGCGAGCTGAAGAAGCGCTACAACATCGCTGCCCTGCCGACTCTGATTCCCCATCCCGAGGCCGCCGGCGTCATCACCGAAGGCCCCAAG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GCGTTTCCGACCGCTCGACTTCTTCGCGATGTTGTAGCGACGGGACGGCTGAGACTAAGGGGTAGGGCTCCGGCGGCCGCAGTAGTGGCTTCCGGGGTTC a Q R L A S * R S A T T S L P C R L * F P I P R P P A S S P K A P R - b R K G W R A E E A L Q H R C P A D S D S P S R G R R R H H R R P Q G - c A K A G E L K K R Y N I A A L P T L I P H P E A A G V I T E G P K - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d E C L S A L Q L L A V V D S G Q R S Q N G M G L G G A D D G F A G L - e A F A P S S F F R * L M A A R G V R I G W G S A A P T M V S P G L - f R L P Q R A S S A S C C R Q G A S E S E G D R P R R R * * R L G W - PinAI Bce83I | | | GCTACCGGTGGTGAACTCAAGAAGCGTGCTACTGACACTTCAAGAGGAACAAAGTGCTTCACAACTTTCAAGAAGTCAACCGAGCAGTGCGACCTCACGA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CGATGGCCACCACTTGAGTTCTTCGCACGATGACTGTGAAGTTCTCCTTGTTTCACGAAGTGTTGAAAGTTCTTCAGTTGGCTCGTCACGCTGGAGTGCT a L P V V N S R S V L L T L Q E E Q S A S Q L S R S Q P S S A T S R - b Y R W * T Q E A C Y * H F K R N K V L H N F Q E V N R A V R P H D - c A T G G E L K K R A T D T S R G T K C F T T F K K S T E Q C D L T T - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S G T T F E L L T S S V S * S S C L A E C S E L L * G L L A V E R - e A V P P S S L F R A V S V E L P V F H K V V K L F D V S C H S R V - f P * R H H V * S A H * Q C K L L F L T S * L K * S T L R A T R G * S - BspMI BsgI | | CCGTTTCGGACAAGACCCAGACTGCCACCTGCTACAGCACCGAGATCAGCACTAGCACATGCCGCAGCGACGTTATCTGCACCACCGACGCTGCCGCCGA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GGCAAAGCCTGTTCTGGGTCTGACGGTGGACGATGTCGTGGCTCTAGTCGTGATCGTGTACGGCGTCGCTGCAATAGACGTGGTGGCTGCGACGGCGGCT a P F R T R P R L P P A T A P R S A L A H A A A T L S A P P T L P P R - b R F G Q D P D C H L L Q H R D Q H * H M P Q R R Y L H H R R C R R - c V S D K T Q T A T C Y S T E I S T S T C R S D V I C T T D A A A E - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d G N R V L G L S G G A V A G L D A S A C A A A V N D A G G V S G G - e V T E S L V W V A V Q * L V S I L V L V H R L S T I Q V V S A A A S - f R K P C S G S Q W R S C C R S * C * C M G C R R * R C W R R Q R R - EcoRV Bpu10I | | GGATATCTGCATGGTCAAGAGGGAAATGGACACTGCCGGTATCATCATCGCCATTGTCTTTGCCGCCTCAGCCGCTTCCATGCTTGGCTACCTCACCTTC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CCTATAGACGTACCAGTTCTCCCTTTACCTGTGACGGCCATAGTAGTAGCGGTAACAGAAACGGCGGAGTCGGCGAAGGTACGAACCGATGGAGTGGAAG a I S A W S R G K W T L P V S S S P L S L P P Q P L P C L A T S P S - b G Y L H G Q E G N G H C R Y H H R H C L C R L S R F H A W L P H L H - c D I C M V K R E M D T A G I I I A I V F A A S A A S M L G Y L T F - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d L I D A H D L P F H V S G T D D D G N D K G G * G S G H K A V E G E - e S I Q M T L L S I S V A P I M M A M T K A A E A A E M S P * R V K - f P Y R C P * S P F P C Q R Y * * R W Q R Q R R L R K W A Q S G * R - BcgI Bpu1102I BsmBI BcgI BssHII | | | | | ATGTGCTGCCGTGACCGCAAGGAGCAGAAGCGTCTCGTCGCCAAGTCCGAAGCTGTTGCTCTCGCCCGTGCCGCCACAAAGAAGCAGCGCGCTGCTCAGC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TACACGACGGCACTGGCGTTCCTCGTCTTCGCAGAGCAGCGGTTCAGGCTTCGACAACGAGAGCGGGCACGGCGGTGTTTCTTCGTCGCGCGACGAGTCG a C A A V T A R S R S V S S P S P K L L L S P V P P Q R S S A L L S - b V L P * P Q G A E A S R R Q V R S C C S R P C R H K E A A R C S A - c M C C R D R K E Q K R L V A K S E A V A L A R A A T K K Q R A A Q R - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d H A A T V A L L L L T E D G L G F S N S E G T G G C L L L A S S L - e M H Q R S R L S C F R R T A L D S A T A R A R A A V F F C R A A * - f * T S G H G C P A S A D R R W T R L Q Q E R G H R W L S A A R Q E A - Eco57I XcmI | | GTCAGCCTCTCATCCGCAACGCTTCAGGCCAGTCTGCCCCTGGTGCTCCTGCTGGCAAT 601 ---------+---------+---------+---------+---------+--------- 659 CAGTCGGAGAGTAGGCGTTGCGAAGTCCGGTCAGACGGGGACCACGAGGACGACCGTTA a V S L S S A T L Q A S L P L V L L L A - b S A S H P Q R F R P V C P W C S C W Q - c Q P L I R N A S G Q S A P G A P A G N - 601 ---------+---------+---------+---------+---------+--------- 659 d T L R E D A V S * A L R G R T S R S A I - e R * G R M R L A E P W D A G P A G A P L - f D A E * G C R K L G T Q G Q H E Q Q C - Enzymes that do cut: AceIII Bce83I BcgI BglI Bpu10I Bpu1102I BsgI BsmBI BspMI BssHII BssSI EarI Eco47III Eco57I EcoRI EcoRV NgoAIV PinAI SgrAI XcmI XhoI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BclI BfiI BglII BplI BpmI BsaI BsaBI BsaXI BsbI BseRI BsiWI BsmI BspEI BspGI BspLU11I BsrBI BsrDI BsrGI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI EciI EcoNI FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XmnI