(Linear) MAP of: ./Fgr-C_02_A12_T3.seq check: 6659 from: 1 to: 417 Fgr-C_02_A12_T3 0 0 0 1 417 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. BfiI EcoRI BssSI KpnI BsmBI Tth111I|BglII | | | | || | GAATTCGGCACGAGGTACCAATGTTTCGTCTCCACACATTTATTTTGAGAAGGATCATTTTTGCTAACCCTTGACTTTTACAGACCCAGTCAGATCTCAT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCATGGTTACAAAGCAGAGGTGTGTAAATAAAACTCTTCCTAGTAAAAACGATTGGGAACTGAAAATGTCTGGGTCAGTCTAGAGTA a E F G T R Y Q C F V S T H L F * E G S F L L T L D F Y R P S Q I S L - b N S A R G T N V S S P H I Y F E K D H F C * P L T F T D P V R S H - c I R H E V P M F R L H T F I L R R I I F A N P * L L Q T Q S D L I - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d F E A R P V L T E D G C M * K S F S * K Q * G K V K V S G T L D * - e N P V L Y W H K T E V C K N Q S P D N K S V R S K * L G L * I E - f I R C S T G I N R R W V N I K L L I M K A L G Q S K C V W D S R M - ApaBI SphI DraIII| EarI BsmBI | BfiI || BsrDI SapI | | | || | | TGGAATCCCGGTCAACAGACCCGGCATGCGTGAGACGACAGCACTGGGTGCGGCCATTGCAGCGGGTTTCGCCGTTGGTATCTGGAAGAGCTTTGATGAC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ACCTTAGGGCCAGTTGTCTGGGCCGTACGCACTCTGCTGTCGTGACCCACGCCGGTAACGTCGCCCAAAGCGGCAACCATAGACCTTCTCGAAACTACTG a E S R S T D P A C V R R Q H W V R P L Q R V S P L V S G R A L M T - b W N P G Q Q T R H A * D D S T G C G H C S G F R R W Y L E E L * * L - c G I P V N R P G M R E T T A L G A A I A A G F A V G I W K S F D D - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d Q F G P * C V R C A H S S L V P H P W Q L P N R R Q Y R S S S Q H - e N S D R D V S G A H T L R C C Q T R G N C R T E G N T D P L A K I V - f P I G T L L G P M R S V V A S P A A M A A P K A T P I Q F L K S S - BseRI BsbI BseRI | | | | TTGAAGGAGGTCAACACCCAAGGCCGTACCATCTTCAAGCCGCAGATTGCCGAGGAGGAGGCGACGAAGCGGTTTGGACGTTGGACCAAGGCCGTCGAGA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AACTTCCTCCAGTTGTGGGTTCCGGCATGGTAGAAGTTCGGCGTCTAACGGCTCCTCCTCCGCTGCTTCGCCAAACCTGCAACCTGGTTCCGGCAGCTCT a * R R S T P K A V P S S S R R L P R R R R R S G L D V G P R P S R - b E G G Q H P R P Y H L Q A A D C R G G G D E A V W T L D Q G R R D - c L K E V N T Q G R T I F K P Q I A E E E A T K R F G R W T K A V E M - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S S P P * C G L G Y W R * A A S Q R P P P S S A T Q V N S W P R R S - e Q L L D V G L A T G D E L R L N G L L L R R L P K S T P G L G D L - f K F S T L V W P R V M K L G C I A S S S A V F R N P R Q V L A T S - PflMI ScaI | | TGTCCAAGGGCTGGGCCAACGAGTGAATGAGAGACTTGATTGGTTTGATTGCTTGGGTTGTGTGTGTGTGTGTCTATGTACCAGTACTTATTTCAATACC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 ACAGGTTCCCGACCCGGTTGCTCACTTACTCTCTGAACTAACCAAACTAACGAACCCAACACACACACACACAGATACATGGTCATGAATAAAGTTATGG a C P R A G P T S E * E T * L V * L L G L C V C V S M Y Q Y L F Q Y L - b V Q G L G Q R V N E R L D W F D C L G C V C V C L C T S T Y F N T - c S K G W A N E * M R D L I G L I A W V V C V C V Y V P V L I S I P - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d T W P S P W R T F S L S S Q N S Q K P Q T H T H R H V L V * K L V - e H G L A P G V L S H S V Q N T Q N S P N H T H T D I Y W Y K N * Y - f I D L P Q A L S H I L S K I P K I A Q T T H T H T * T G T S I E I G - TAGTTCTAGTTTAGCTT 401 ---------+------- 417 ATCAAGATCAAATCGAA a V L V * L - b * F * F S - c S S S L A - 401 ---------+------- 417 d * N * N L K - e R T R T * S - f L E L K A - Enzymes that do cut: ApaBI BfiI BglII BsbI BseRI BsmBI BsrDI BssSI DraIII EarI EcoRI KpnI PflMI SapI ScaI SphI Tth111I Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaLI AscI AvrII BamHI BbsI Bce83I BcgI BclI BglI BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsgI BsiWI BsmI BspEI BspGI BspLU11I BspMI BsrBI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DrdI DrdII EagI EciI Eco47III Eco57I EcoNI EcoRV FseI FspI HgiEII HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SrfI Sse8387I Sse8647I SspI StuI SwaI VspI XbaI XcmI XhoI XmnI