(Linear) MAP of: ./Fgr-C_02_A13_T3.seq check: 6868 from: 1 to: 583 Fgr-C_02_A13_T3 0 0 0 1 583 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI BseRI BssSI | | | | GAATTCGGCACGAGGAGCAAGTCAAGATGCCTCCCCGCGCCCACTCCAAGACCTCTCGTGTCCCCCGCCGACCCTTCGAGTCTGCCCGACTTGACTCCGA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCTCGTTCAGTTCTACGGAGGGGCGCGGGTGAGGTTCTGGAGAGCACAGGGGGCGGCTGGGAAGCTCAGACGGGCTGAACTGAGGCT a E F G T R S K S R C L P A P T P R P L V S P A D P S S L P D L T P S - b N S A R G A S Q D A S P R P L Q D L S C P P P T L R V C P T * L R - c I R H E E Q V K M P P R A H S K T S R V P R R P F E S A R L D S E - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I R C S S C T L I G G R A W E L V E R T G R R G K S D A R S S E S - e F E A R P A L * S A E G R G S W S R E H G G G V R R T Q G V Q S R - f N P V L L L D L H R G A G V G L G R T D G A S G E L R G S K V G - AflII FspI Tth111I | | | GCTTAAGCTCGTCGGCGAGTATGGCCTGCGCAATAAGCGTGAGGTCTGGCGAGTCGGTCTGACTCTGTCCAAGATCCGTCGTGCTGCCCGTCAGCTCCTT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CGAATTCGAGCAGCCGCTCATACCGGACGCGTTATTCGCACTCCAGACCGCTCAGCCAGACTGAGACAGGTTCTAGGCAGCACGACGGGCAGTCGAGGAA a L S S S A S M A C A I S V R S G E S V * L C P R S V V L P V S S L - b A * A R R R V W P A Q * A * G L A S R S D S V Q D P S C C P S A P Y - c L K L V G E Y G L R N K R E V W R V G L T L S K I R R A A R Q L L - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d S L S T P S Y P R R L L R S T Q R T P R V R D L I R R A A R * S R - e A * A R R R T H G A C Y A H P R A L R D S E T W S G D H Q G D A G - f L K L E D A L I A Q A I L T L D P S D T Q S Q G L D T T S G T L E K - BsmBI EarI AhdI | NspV | AatII| | AceIII BcgI BsmBI| | BsrDI BcgI|| | Bce83I | | || | | ||| | | ACCCTCGACGAGAAGGACCCCAAGCGTCTCTTCGAAGGCAATGCCCTCATTCGACGTCTCGTCCGTGTCGGTGTTCTCGACGAGTCCCGCATGAAGCTGG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TGGGAGCTGCTCTTCCTGGGGTTCGCAGAGAAGCTTCCGTTACGGGAGTAAGCTGCAGAGCAGGCACAGCCACAAGAGCTGCTCAGGGCGTACTTCGACC a P S T R R T P S V S S K A M P S F D V S S V S V F S T S P A * S W - b P R R E G P Q A S L R R Q C P H S T S R P C R C S R R V P H E A G - c T L D E K D P K R L F E G N A L I R R L V R V G V L D E S R M K L D - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d V R S S F S G L R R K S P L A R M R R R T R T P T R S S D R M F S - e * G R R S P G W A D R R L C H G * E V D R G H R H E R R T G C S A P - f G E V L L V G L T E E F A I G E N S T E D T D T N E V L G A H L Q - Bce83I BpmI BsmBI PshAI BsaI | | | | ATTACGTCCTGGCCCTCAAGATCGAGGATTTCCTTGAGCGTCGTCTCCAGACCTGTGTCTGGAAGCTCGGTCTCGCCAAGTCTATCCACCACGCCCGTGT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TAATGCAGGACCGGGAGTTCTAGCTCCTAAAGGAACTCGCAGCAGAGGTCTGGACACAGACCTTCGAGCCAGAGCGGTTCAGATAGGTGGTGCGGGCACA a I T S W P S R S R I S L S V V S R P V S G S S V S P S L S T T P V S - b L R P G P Q D R G F P * A S S P D L C L E A R S R Q V Y P P R P C - c Y V L A L K I E D F L E R R L Q T C V W K L G L A K S I H H A R V - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S * T R A R L I S S K R S R R R W V Q T Q F S P R A L D I W W A R T - e N R G P G * S R P N G Q A D D G S R H R S A R D R W T * G G R G H - f I V D Q G E L D L I E K L T T E L G T D P L E T E G L R D V V G T - EciI Psp1406I BsmBI | | | CCTCATCCGCCAGCGTCACATCCGAGTCGGAAAGCAGATCGTCAACGTTCCTTCTTTCATCGTCCGTCTCGACTCCCAGAAGCACATCGACTTCGCTCTT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GGAGTAGGCGGTCGCAGTGTAGGCTCAGCCTTTCGTCTAGCAGTTGCAAGGAAGAAAGTAGCAGGCAGAGCTGAGGGTCTTCGTGTAGCTGAAGCGAGAA a S S A S V T S E S E S R S S T F L L S S S V S T P R S T S T S L L - b P H P P A S H P S R K A D R Q R S F F H R P S R L P E A H R L R S Y - c L I R Q R H I R V G K Q I V N V P S F I V R L D S Q K H I D F A L - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d R M R W R * M R T P F C I T L T G E K M T R R S E W F C M S K A R - e G * G G A D C G L R F A S R * R E K K * R G D R S G S A C R S R E - f D E D A L T V D S D S L L D D V N R R E D D T E V G L L V D V E S K - EagI BglI| SfiI| || ACCTCGCCCTTCGGTGGTGGCCGTCCCGGCCGTGTCCGCAGAAAGAAGGCCAAGGCCGCCGAGGGCGGTGAGGGTGGCGAGGA 501 ---------+---------+---------+---------+---------+---------+---------+---------+--- 583 TGGAGCGGGAAGCCACCACCGGCAGGGCCGGCACAGGCGTCTTTCTTCCGGTTCCGGCGGCTCCCGCCACTCCCACCGCTCCT a P R P S V V A V P A V S A E R R P R P P R A V R V A R - b L A L R W W P S R P C P Q K E G Q G R R G R * G W R G - c T S P F G G G R P G R V R R K K A K A A E G G E G G E - 501 ---------+---------+---------+---------+---------+---------+---------+---------+--- 583 d V E G K P P P R G P R T R L F F A L A A S P P S P P S S - e * R A R R H H G D R G H G C F S P W P R R P R H P H R P - f G R G E T T A T G A T D A S L L G L G G L A T L T A L - Enzymes that do cut: AatII AceIII AflII AhdI Bce83I BcgI BglI BpmI BsaI BseRI BsmBI BsrDI BssSI EagI EarI EciI EcoRI FspI NspV PshAI Psp1406I SfiI Tth111I Enzymes that do not cut: AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BclI BfiI BglII BplI Bpu10I Bpu1102I BsaBI BsaXI BsbI BsgI BsiWI BsmI BspEI BspGI BspLU11I BspMI BsrBI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII Eco47III Eco57I EcoNI EcoRV FseI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI PacI Pfl1108I PflMI PinAI PmeI PmlI PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI VspI XbaI XcmI XhoI XmnI