(Linear) MAP of: ./Fgr-C_02_A14_T3.seq check: 3528 from: 1 to: 614 Fgr-C_02_A14_T3 0 0 0 1 614 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI Pfl1108I Bce83I AceIII | | | | | GAATTCGGCACGAGGACCAATCATGCTCGTAGCGCATAACCAAGTTCACGACAGCTCAAGCAACATGGACCAACAGGAACCGCCAGAGTTTATCCTCGAT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCTGGTTAGTACGAGCATCGCGTATTGGTTCAAGTGCTGTCGAGTTCGTTGTACCTGGTTGTCCTTGGCGGTCTCAAATAGGAGCTA a E F G T R T N H A R S A * P S S R Q L K Q H G P T G T A R V Y P R C - b N S A R G P I M L V A H N Q V H D S S S N M D Q Q E P P E F I L D - c I R H E D Q S C S * R I T K F T T A Q A T W T N R N R Q S L S S M - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N P V L V L * A R L A Y G L E R C S L C C P G V P V A L T * G R - e I R C S S W D H E Y R M V L N V V A * A V H V L L F R W L K D E I - f F E A R P G I M S T A C L W T * S L E L L M S W C S G G S N I R S - BsaXI NruI AatII Bst1107I BssSI | | | | | GTATTTACTGACCCGCGCTCCGTTCGCGACGTCGTTAAAGGTATACTTCACACGATATTCTTTCACAGATTCTTTCCTTCTCTAGTTCCTCAAACTCGTG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CATAAATGACTGGGCGCGAGGCAAGCGCTGCAGCAATTTCCATATGAAGTGTGCTATAAGAAAGTGTCTAAGAAAGGAAGAGATCAAGGAGTTTGAGCAC a I Y * P A L R S R R R * R Y T S H D I L S Q I L S F S S S S N S * - b V F T D P R S V R D V V K G I L H T I F F H R F F P S L V P Q T R E - c Y L L T R A P F A T S L K V Y F T R Y S F T D S F L L * F L K L V - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d H I * Q G A S R E R R R * L Y V E C S I R E C I R E K E L E E F E H - e Y K S V R A G N A V D N F T Y K V R Y E K V S E K R R * N R L S T - f T N V S G R E T R S T T L P I S * V I N K * L N K G E R T G * V R - SacI BspGI EarI SalI XhoI| | | | || AAGTTCTGGACCTCACTCTTCCCTATGTCGACGACGATGAGCTCGAGACTATGATAGAGCAGCGCGTCGCGGCCTTTGAGCGACAGATAGACACCCAGCG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TTCAAGACCTGGAGTGAGAAGGGATACAGCTGCTGCTACTCGAGCTCTGATACTATCTCGTCGCGCAGCGCCGGAAACTCGCTGTCTATCTGTGGGTCGC a S S G P H S S L C R R R * A R D Y D R A A R R G L * A T D R H P A - b V L D L T L P Y V D D D E L E T M I E Q R V A A F E R Q I D T Q R - c K F W T S L F P M S T T M S S R L * * S S A S R P L S D R * T P S A - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d L E P G * E E R H R R R H A R S * S L A A R R P R Q A V S L C G A - e F N Q V E S K G I D V V I L E L S H Y L L A D R G K L S L Y V G L - f S T R S R V R G * T S S S S S S V I I S C R T A A K S R C I S V W R - BsgI NgoAIV | PvuII SgrAI | StuI | | | | CACATCCAGCGGAACAAATAATGCTTCCGGTGGAAGCGCGACCGGGGGACGCGGGCAGCTGGTTGTGCAGTTCTTCGAGAAGCGCCGGCGCAAGGCCTGG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GTGTAGGTCGCCTTGTTTATTACGAAGGCCACCTTCGCGCTGGCCCCCTGCGCCCGTCGACCAACACGTCAAGAAGCTCTTCGCGGCCGCGTTCCGGACC a H I Q R N K * C F R W K R D R G T R A A G C A V L R E A P A Q G L V - b T S S G T N N A S G G S A T G G R G Q L V V Q F F E K R R R K A W - c H P A E Q I M L P V E A R P G D A G S W L C S S S R S A G A R P G - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d C M W R F L Y H K R H F R S R P V R A A P Q A T R R S A G A C P R - e A C G A S C I I S G T S A R G P S A P L Q N H L E E L L A P A L G P - f V D L P V F L A E P P L A V P P R P C S T T C N K S F R R R L A Q - BssSI EarI | | TTGTCTCGTGGCGATGAAGAGGTCTGCTGGGAATGTTGGACGATCAAAGTAACCGTCGCCGAGCCCAGAACAGAAAGCGAACGAGCTAAAGTCCGACGCG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AACAGAGCACCGCTACTTCTCCAGACGACCCTTACAACCTGCTAGTTTCATTGGCAGCGGCTCGGGTCTTGTCTTTCGCTTGCTCGATTTCAGGCTGCGC a V S W R * R G L L G M L D D Q S N R R R A Q N R K R T S * S P T R - b L S R G D E E V C W E C W T I K V T V A E P R T E S E R A K V R R A - c C L V A M K R S A G N V G R S K * P S P S P E Q K A N E L K S D A - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d T T E H R H L P R S P I N S S * L L R R R A W F L F R V L * L G V R - e Q R T A I F L D A P F T P R D F Y G D G L G S C F A F S S F D S A - f N D R P S S S T Q Q S H Q V I L T V T A S G L V S L S R A L T R R - BsrDI XmnI | | CAATGGAACAAACCCTTCTAACGACAGCGATGAAGATTGTTACGTTCGCAAACACCCACAAGGATCATATACCACCTATCACCACCCAAGGAACGAACCC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 GTTACCTTGTTTGGGAAGATTGCTGTCGCTACTTCTAACAATGCAAGCGTTTGTGGGTGTTCCTAGTATATGGTGGATAGTGGTGGGTTCCTTGCTTGGG a N G T N P S N D S D E D C Y V R K H P Q G S Y T T Y H H P R N E P - b M E Q T L L T T A M K I V T F A N T H K D H I P P I T T Q G T N P - c Q W N K P F * R Q R * R L L R S Q T P T R I I Y H L S P P K E R T R - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d L P V F G E L S L S S S Q * T R L C G C P D Y V V * * W G L F S G - e C H F L G K * R C R H L N N R E C V G V L I M Y W R D G G L S R V - f A I S C V R R V V A I F I T V N A F V W L S * I G G I V V W P V F G - GTTCCCATACAAGA 601 ---------+---- 614 CAAGGGTATGTTCT a V P I Q - b F P Y K - c S H T R - 601 ---------+---- 614 d T G M C S - e R E W V L - f N G Y L - Enzymes that do cut: AatII AceIII Bce83I BsaXI BsgI BspGI BsrDI BssSI Bst1107I EarI EcoRI NgoAIV NruI Pfl1108I PvuII SacI SalI SgrAI StuI XhoI XmnI Enzymes that do not cut: AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BcgI BclI BfiI BglI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsbI BseRI BsiWI BsmI BsmBI BspEI BspLU11I BspMI BsrBI BsrGI BssHII BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI EciI Eco47III Eco57I EcoNI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NheI NotI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI RcaI RsrII SacII SanDI SapI ScaI SexAI SfiI SgfI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI SwaI Tth111I VspI XbaI XcmI