(Linear) MAP of: ./Fgr-C_02_A15_T3.seq check: 3604 from: 1 to: 646 Fgr-C_02_A15_T3 0 0 0 1 646 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. BseRI EcoRI BssSI BsbI | | | | | GAATTCGGCACGAGGAGCAAACAACACTCGCAACAATCACCACTTCAAAACTCTACATACTCTCACACTCAACTCTTTCTCAAACACCATTAACCTGAAG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCTCGTTTGTTGTGAGCGTTGTTAGTGGTGAAGTTTTGAGATGTATGAGAGTGTGAGTTGAGAAAGAGTTTGTGGTAATTGGACTTC a E F G T R S K Q H S Q Q S P L Q N S T Y S H T Q L F L K H H * P E A - b N S A R G A N N T R N N H H F K T L H T L T L N S F S N T I N L K - c I R H E E Q T T L A T I T T S K L Y I L S H S T L S Q T P L T * S - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I R C S S C V V S A V I V V E F S * M S E C E V R E * V G N V Q L - e F E A R P A F L V R L L * W K L V R C V R V S L E K E F V M L R F - f N P V L L L C C E C C D G S * F E V Y E * V * S K R L C W * G S - Eco57I XmnI NspV | BsbI BseRI EarI | | | | | | CACTTCACTTTCGAACCCACCACCAACACAATCAACAAAATGGCTTTCTTCCCTCGCAACTTCTACAACTCCGACGCTTCCTTCACTCCTCTCTTCCGTC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTGAAGTGAAAGCTTGGGTGGTGGTTGTGTTAGTTGTTTTACCGAAAGAAGGGAGCGTTGAAGATGTTGAGGCTGCGAAGGAAGTGAGGAGAGAAGGCAG a L H F R T H H Q H N Q Q N G F L P S Q L L Q L R R F L H S S L P S - b H F T F E P T T N T I N K M A F F P R N F Y N S D A S F T P L F R L - c T S L S N P P P T Q S T K W L S S L A T S T T P T L P S L L S S V - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d V E S E F G G G V C D V F H S E E R A V E V V G V S G E S R E E T - e C K V K S G V V L V I L L I A K K G R L K * L E S A E K V G R K R - f A S * K R V W W W C L * C F P K R G E C S R C S R R K R * E E R G D - Bpu10I BsmBI DrdII BglI | AlwNI | | | | | TCCTTGACGACTTTGACAGCTACTCTCGCCAGGGAACCAACGGAAATGGTGGCGCTCGCCGCAGCGGCCTCAGCCACTGGCAGCCCAAGTTCGATGTCCG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AGGAACTGCTGAAACTGTCGATGAGAGCGGTCCCTTGGTTGCCTTTACCACCGCGAGCGGCGTCGCCGGAGTCGGTGACCGTCGGGTTCAAGCTACAGGC a P * R L * Q L L S P G N Q R K W W R S P Q R P Q P L A A Q V R C P - b L D D F D S Y S R Q G T N G N G G A R R S G L S H W Q P K F D V R - c S L T T L T A T L A R E P T E M V A L A A A A S A T G S P S S M S A - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d E K V V K V A V R A L S G V S I T A S A A A A E A V P L G L E I D - e R R S S K S L * E R W P V L P F P P A R R L P R L W Q C G L N S T R - f G Q R S Q C S S E G P F W R F H H R E G C R G * G S A A W T R H G - Pfl1108I BpmI SacI SacII | | | | CGAGACTGGAGAATCCTACGAGCTTCACGGCGAGCTCCCCGGTATGAACAAGTCTGATGTTCACATCGAGTTCACTGAACCTCAGACCATGCTCATCCGC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GCTCTGACCTCTTAGGATGCTCGAAGTGCCGCTCGAGGGGCCATACTTGTTCAGACTACAAGTGTAGCTCAAGTGACTTGGAGTCTGGTACGAGTAGGCG a R D W R I L R A S R R A P R Y E Q V * C S H R V H * T S D H A H P R - b E T G E S Y E L H G E L P G M N K S D V H I E F T E P Q T M L I R - c R L E N P T S F T A S S P V * T S L M F T S S S L N L R P C S S A - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d A L S S F G V L K V A L E G T H V L R I N V D L E S F R L G H E D A - e S V P S D * S S * P S S G P I F L D S T * M S N V S G * V M S M R - f R S Q L I R R A E R R A G R Y S C T Q H E C R T * Q V E S W A * G - NgoAIV BsaI NarI | | | GGCAAGACCGAGCGCACCTACACTGCCGGCACCCCTCCCGCTGGTCTCGTCGAGGGCACCGAAGCCCGAGGCGCCATCACTGATGACAGCGAGGAACACA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CCGTTCTGGCTCGCGTGGATGTGACGGCCGTGGGGAGGGCGACCAGAGCAGCTCCCGTGGCTTCGGGCTCCGCGGTAGTGACTACTGTCGCTCCTTGTGT a Q D R A H L H C R H P S R W S R R G H R S P R R H H * * Q R G T Q - b G K T E R T Y T A G T P P A G L V E G T E A R G A I T D D S E E H S - c A R P S A P T L P A P L P L V S S R A P K P E A P S L M T A R N T - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d A L G L A G V S G A G R G S T E D L A G F G S A G D S I V A L F V - e P L V S R V * V A P V G G A P R T S P V S A R P A M V S S L S S C - f R C S R A C R C Q R C G E R Q D R R P C R L G L R W * Q H C R P V C - BssSI BsaXI BbsI BseRI | BstEII | | | | | GCAACTCCCACCACGCCACCGTCGAAGACGAGGAGCAAGCCAAGGCTCACGAGGCCAGCACCGAGGTCACCCACCATGAACAGCCCCAGGAAGTTGAGAA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CGTTGAGGGTGGTGCGGTGGCAGCTTCTGCTCCTCGTTCGGTTCCGAGTGCTCCGGTCGTGGCTCCAGTGGGTGGTACTTGTCGGGGTCCTTCAACTCTT a Q L P P R H R R R R G A S Q G S R G Q H R G H P P * T A P G S * E - b N S H H A T V E D E E Q A K A H E A S T E V T H H E Q P Q E V E K - c A T P T T P P S K T R S K P R L T R P A P R S P T M N S P R K L R R - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d A V G V V G G D F V L L L G L S V L G A G L D G V M F L G L F N L - e L L E W W A V T S S S S C A L A * S A L V S T V W W S C G W S T S F - f C S G G R W R R L R P A L W P E R P W C R P * G G H V A G P L Q S - PflMI SalI ScaI| | || GAAGCCCGTCGACCAGTCCAAGTACTGGCTCACCGAGCGCAGCTTC 601 ---------+---------+---------+---------+------ 646 CTTCGGGCAGCTGGTCAGGTTCATGACCGAGTGGCTCGCGTCGAAG a E A R R P V Q V L A H R A Q L - b K P V D Q S K Y W L T E R S F - c S P S T S P S T G S P S A A - 601 ---------+---------+---------+---------+------ 646 d L L G D V L G L V P E G L A A E - e F G T S W D L Y Q S V S R L K - f S A R R G T W T S A * R A C S - Enzymes that do cut: AlwNI BbsI BglI BpmI Bpu10I BsaI BsaXI BsbI BseRI BsmBI BssSI BstEII DrdII EarI Eco57I EcoRI NarI NgoAIV NspV Pfl1108I PflMI SacI SacII SalI ScaI XmnI Enzymes that do not cut: AatII AceIII AflII AhdI ApaI ApaBI ApaLI AscI AvrII BamHI Bce83I BcgI BclI BfiI BglII BplI Bpu1102I BsaBI BsgI BsiWI BsmI BspEI BspGI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DraIII DrdI EagI EciI Eco47III EcoNI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NcoI NdeI NheI NotI NruI NsiI PacI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SanDI SapI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI