(Linear) MAP of: ./Fgr-C_02_A17_T3.seq check: 2765 from: 1 to: 674 Fgr-C_02_A17_T3 0 0 0 1 674 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI BglII | | | GAATTCGGCACGAGGGTCCTCAACTTCTTTACTACATCACCCTCAGTTACATCATAGCAAAAATGGGCGTCACCGACCGCATTATTCAGATTGGAGGCCA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCCAGGAGTTGAAGAAATGATGTAGTGGGAGTCAATGTAGTATCGTTTTTACCCGCAGTGGCTGGCGTAATAAGTCTAACCTCCGGT a E F G T R V L N F F T T S P S V T S * Q K W A S P T A L F R L E A R - b N S A R G S S T S L L H H P Q L H H S K N G R H R P H Y S D W R P - c I R H E G P Q L L Y Y I T L S Y I I A K M G V T D R I I Q I G G Q - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d N P V L T R L K K V V D G E T V D Y C F H A D G V A N N L N S A - e I R C S P G * S R * * M V R L * M M A F I P T V S R M I * I P P W - f F E A R P D E V E K S C * G * N C * L L F P R * R G C * E S Q L G - BpmI BstXI HgiEII |NruI EcoRV BsmI | | | | | | GATCTCTGGCAACCCGACCGCTGGCGGTCGCGAGAAGATCCTCCAGAAGAACCCTGATGATATCGTTGTCACCGCCGCCTGCCGAAGCGCATTCACCAAG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CTAGAGACCGTTGGGCTGGCGACCGCCAGCGCTCTTCTAGGAGGTCTTCTTGGGACTACTATAGCAACAGTGGCGGCGGACGGCTTCGCGTAAGTGGTTC a S L A T R P L A V A R R S S R R T L M I S L S P P P A E A H S P R - b D L W Q P D R W R S R E D P P E E P * * Y R C H R R L P K R I H Q G - c I S G N P T A G G R E K I L Q K N P D D I V V T A A C R S A F T K - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d L D R A V R G S A T A L L D E L L V R I I D N D G G G A S A C E G L - e I E P L G V A P P R S F I R W F F G S S I T T V A A Q R L A N V L - f S R Q C G S R Q R D R S S G G S S G Q H Y R Q * R R R G F R M * W - Bce83I | GGTGGCCGTGGTGGTTTCAAGGACACCCACGCTGCTGACTTGATGGCCGGAGTCCTCAAGGCTATCCTCGACCGTTCAAAGATCAACCCCGCGCTCGTCG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CCACCGGCACCACCAAAGTTCCTGTGGGTGCGACGACTGAACTACCGGCCTCAGGAGTTCCGATAGGAGCTGGCAAGTTTCTAGTTGGGGCGCGAGCAGC a V A V V V S R T P T L L T * W P E S S R L S S T V Q R S T P R S S - b W P W W F Q G H P R C * L D G R S P Q G Y P R P F K D Q P R A R R - c G G R G G F K D T H A A D L M A G V L K A I L D R S K I N P A L V E - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d T A T T T E L V G V S S V Q H G S D E L S D E V T * L D V G R E D - e P P R P P K L S V W A A S K I A P T R L A I R S R E F I L G A S T - f P H G H H N * P C G R Q Q S S P R L G * P * G R G N L S * G R A R R - NgoAIV Sse8647I DrdI BcgI AceIII BcgI | | | | | | | AGGACCTATGTGTCGGCACTGTGCTTGCCCCCGGTGGTGGTGCGACTGAGATGCGAGCTGCCAGCTTGGTCGCCGGCTTCCCCGAGTCCATCGCCGTCCG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TCCTGGATACACAGCCGTGACACGAACGGGGGCCACCACCACGCTGACTCTACGCTCGACGGTCGAACCAGCGGCCGAAGGGGCTCAGGTAGCGGCAGGC a R T Y V S A L C L P P V V V R L R C E L P A W S P A S P S P S P S E - b G P M C R H C A C P R W W C D * D A S C Q L G R R L P R V H R R P - c D L C V G T V L A P G G G A T E M R A A S L V A G F P E S I A V R - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d L V * T D A S H K G G T T T R S L H S S G A Q D G A E G L G D G D - e S S R H T P V T S A G P P P A V S I R A A L K T A P K G S D M A T R - f P G I H R C Q A Q G R H H H S Q S A L Q W S P R R S G R T W R R G - EcoRV EarI BsaBI | BpmI SapI BsaI XcmI ClaI | | BsbI | | | | | | | | AACCCTCAACCGACAGTGCTCTTCTGGTCTCCAGGCCACCGTCGATGTCGCCAACCAGATCAAGACTGGCATGATCGATATCGGTATTGGTGCTGGTGTT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 TTGGGAGTTGGCTGTCACGAGAAGACCAGAGGTCCGGTGGCAGCTACAGCGGTTGGTCTAGTTCTGACCGTACTAGCTATAGCCATAACCACGACCACAA a P S T D S A L L V S R P P S M S P T R S R L A * S I S V L V L V L - b N P Q P T V L F W S P G H R R C R Q P D Q D W H D R Y R Y W C W C * - c T L N R Q C S S G L Q A T V D V A N Q I K T G M I D I G I G A G V - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d S G E V S L A R R T E L G G D I D G V L D L S A H D I D T N T S T N - e V R L R C H E E P R W A V T S T A L W I L V P M I S I P I P A P T - f F G * G V T S K Q D G P W R R H R W G S * S Q C S R Y R Y Q H Q H - NspV BseRI | | GAGAGCATGTCCATCAACTACGGTCCCGGTGCTGTCGGTGAGTTCTCTGAGGAGTTCGAAAAGGTCCCCGAGGCTGCCAACTGCAAGGTCCCTATGGGTG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CTCTCGTACAGGTAGTTGATGCCAGGGCCACGACAGCCACTCAAGAGACTCCTCAAGCTTTTCCAGGGGCTCCGACGGTTGACGTTCCAGGGATACCCAC a R A C P S T T V P V L S V S S L R S S K R S P R L P T A R S L W V - b E H V H Q L R S R C C R * V L * G V R K G P R G C Q L Q G P Y G C - c E S M S I N Y G P G A V G E F S E E F E K V P E A A N C K V P M G V - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d L A H G D V V T G T S D T L E R L L E F L D G L S G V A L D R H T - e S L M D M L * P G P A T P S N E S S N S F T G S A A L Q L T G I P - f Q S C T W * S R D R H Q R H T R Q P T R F P G R P Q W S C P G * P H - MscI | TTCTGTCTGAGCAGATGGCCAAGGATCTTGGTATCACCCGACAGGCGCAAGACACTTTCGCCGCCTCATCATAC 601 ---------+---------+---------+---------+---------+---------+---------+---- 674 AAGACAGACTCGTCTACCGGTTCCTAGAACCATAGTGGGCTGTCCGCGTTCTGTGAAAGCGGCGGAGTAGTATG a F C L S R W P R I L V S P D R R K T L S P P H H - b S V * A D G Q G S W Y H P T G A R H F R R L I I - c L S E Q M A K D L G I T R Q A Q D T F A A S S Y - 601 ---------+---------+---------+---------+---------+---------+---------+---- 674 d N Q R L L H G L I K T D G S L R L V S E G G * * V - e T R D S C I A L S R P I V R C A C S V K A A E D Y - f E T Q A S P W P D Q Y * G V P A L C K R R R M M - Enzymes that do cut: AceIII Bce83I BcgI BglII BpmI BsaI BsaBI BsbI BseRI BsmI BssSI BstXI ClaI DrdI EarI EcoRI EcoRV HgiEII MscI NgoAIV NruI NspV SapI Sse8647I XcmI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BclI BfiI BglI BplI Bpu10I Bpu1102I BsaXI BsgI BsiWI BsmBI BspEI BspGI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII Bst1107I BstEII Bsu36I DraI DraIII DrdII EagI EciI Eco47III Eco57I EcoNI FseI FspI HindIII HpaI KpnI MfeI MluI NarI NcoI NdeI NheI NotI NsiI PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I SspI StuI SwaI Tth111I VspI XbaI XhoI XmnI