(Linear) MAP of: ./Fgr-C_02_A18_T3.seq check: 9639 from: 1 to: 703 Fgr-C_02_A18_T3 0 0 0 1 703 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. BsaI BstEII NspV PinAI | BplI Bpu10I | BcgI | | | | | | | GTTCGAACTCTGACCACCGTTACCACCGGTTCTGAGACCGACTCTGCTGACACTGCTGAGGTCACCACATTCACCACTGATGGCACCGAGGTCGTCCGAA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CAAGCTTGAGACTGGTGGCAATGGTGGCCAAGACTCTGGCTGAGACGACTGTGACGACTCCAGTGGTGTAAGTGGTGACTACCGTGGCTCCAGCAGGCTT a V R T L T T V T T G S E T D S A D T A E V T T F T T D G T E V V R T - b F E L * P P L P P V L R P T L L T L L R S P H S P L M A P R S S E - c S N S D H R Y H R F * D R L C * H C * G H H I H H * W H R G R P N - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d E F E S W R * W R N Q S R S Q Q C Q Q P * W M * W Q H C R P R G F - e N S S Q G G N G G T R L G V R S V S S L D G C E G S I A G L D D S - f R V R V V T V V P E S V S E A S V A S T V V N V V S P V S T T R - BcgI PinAI | | CTCTGACCACCGTTACTACCGGTTCTGAGTCCGAGTCTGGATCTGTTTCGGAGACTGTTACTGACGCCTCCACCGTCACCGAGGGCTCTGGCACTGCTAC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GAGACTGGTGGCAATGATGGCCAAGACTCAGGCTCAGACCTAGACAAAGCCTCTGACAATGACTGCGGAGGTGGCAGTGGCTCCCGAGACCGTGACGATG a L T T V T T G S E S E S G S V S E T V T D A S T V T E G S G T A T - b L * P P L L P V L S P S L D L F R R L L L T P P P S P R A L A L L L - c S D H R Y Y R F * V R V W I C F G D C Y * R L H R H R G L W H C Y - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d E S W R * * R N Q T R T Q I Q K P S Q * Q R R W R * R P S Q C Q * - e S Q G G N S G T R L G L R S R N R L S N S V G G G D G L A R A S S - f V R V V T V V P E S D S D P D T E S V T V S A E V T V S P E P V A V - Eco47III StuI EciI | | | | TGGCACTGAGGCCTCCGCCAGCGCTTCTTCTACCGAAACTGACAACGCTGCTGTTGCTCAGATGACTGGTGCCCCTATGGGCGTCATCGCCGCTGCTGGT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 ACCGTGACTCCGGAGGCGGTCGCGAAGAAGATGGCTTTGACTGTTGCGACGACAACGAGTCTACTGACCACGGGGATACCCGCAGTAGCGGCGACGACCA a G T E A S A S A S S T E T D N A A V A Q M T G A P M G V I A A A G - b A L R P P P A L L L P K L T T L L L L R * L V P L W A S S P L L V - c W H * G L R Q R F F Y R N * Q R C C C S D D W C P Y G R H R R C W S - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d Q C Q P R R W R K K * R F Q C R Q Q Q E S S Q H G * P R * R R Q Q - e S A S L G G G A S R R G F S V V S S N S L H S T G R H A D D G S S T - f P V S A E A L A E E V S V S L A A T A * I V P A G I P T M A A A P - BsaI BseRI BseRI | BspLU11I | | | CTCGCTATGCTCCTCCTCTAAATCAAGGATGGATTCGATTTTGACGTTTAATGCTTTTTANCGTTGCACATGTTTGTTACATAATTCACGCCTGTACCTC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GAGCGATACGAGGAGGAGATTTAGTTCCTACCTAAGCTAAAACTGCAAATTACGAAAAATNGCAACGTGTACAAACAATGTATTAAGTGCGGACATGGAG a L A M L L L * I K D G F D F D V * C F L ? L H M F V T * F T P V P R - b S L C S S S K S R M D S I L T F N A F ? R C T C L L H N S R L Y L - c R Y A P P L N Q G W I R F * R L M L F ? V A H V C Y I I H A C T S - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d D R * A G G R F * P H I R N Q R K I S K ? T A C T Q * M I * A Q V E - e E S H E E E L D L I S E I K V N L A K * R Q V H K N C L E R R Y R - f R A I S R R * I L S P N S K S T * H K K ? N C M N T V Y N V G T G - Bpu10I BspMI SanDI | BcgI | | | | | GATCTTTTGGGACCCTTAGCATATTTCCTCGGTGCAAGGAGTCGGTTTGCGGAAGAATCTTCACATTATGGAGAAATGGAAACGAGGTGAATGGACATGA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CTAGAAAACCCTGGGAATCGTATAAAGGAGCCACGTTCCTCAGCCAAACGCCTTCTTAGAAGTGTAATACCTCTTTACCTTTGCTCCACTTACCTGTACT a S F G T L S I F P R C K E S V C G R I F T L W R N G N E V N G H D - b D L L G P L A Y F L G A R S R F A E E S S H Y G E M E T R * M D M T - c I F W D P * H I S S V Q G V G L R K N L H I M E K W K R G E W T * - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d I K Q S G * C I E E T C P T P K R F F R * M I S F H F R P S H V H - e S R K P G K A Y K R P A L L R N A S S D E C * P S I S V L H I S M - f R D K P V R L M N G R H L S D T Q P L I K V N H L F P F S T F P C S - BcgI | CAGGGCAGGTTTTTCGAGGCTTTAATGACGCATACGGCTTATCTCTCCTTTAATGGACACGACAAGAAATGTTAGAACGGATGGGATTTTGATGTTGTTT 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 GTCCCGTCCAAAAAGCTCCGAAATTACTGCGTATGCCGAATAGAGAGGAAATTACCTGTGCTGTTCTTTACAATCTTGCCTACCCTAAAACTACAACAAA a R A G F S R L * * R I R L I S P L M D T T R N V R T D G I L M L F - b G Q V F R G F N D A Y G L S L L * W T R Q E M L E R M G F * C C L - c Q G R F F E A L M T H T A Y L S F N G H D K K C * N G W D F D V V C - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d C P L N K S A K I V C V A * R E K L P C S L F H * F P H S K S T T - e V P C T K R P K L S A Y P K D R R * H V R C S I N S R I P N Q H Q K - f L A P K E L S * H R M R S I E G K I S V V L F T L V S P I K I N N - BseRI BsmBI | BssSI BsaXI | | SphI| StuI BsbI | | | || | | GTGAGGCGAGGAGGTGGCGTGACATGAGACGACGACGGGAGATGGCATGCTCGTGCTGCCGTCACACAAGGCCTGTGTTGTCTTTCATGGTTACATGGGT 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CACTCCGCTCCTCCACCGCACTGTACTCTGCTGCTGCCCTCTACCGTACGAGCACGACGGCAGTGTGTTCCGGACACAACAGAAAGTACCAATGTACCCA a V R R G G G V T * D D D G R W H A R A A V T Q G L C C L S W L H G F - b * G E E V A * H E T T T G D G M L V L P S H K A C V V F H G Y M G - c E A R R W R D M R R R R E M A C S C C R H T R P V L S F M V T W V - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d Q S A L L H R S M L R R R S I A H E H Q R * V L G T N D K M T V H T - e H P S S T A H C S V V V P S P M S T S G D C L A Q T T K * P * M P - f T L R P P P T V H S S S P L H C A R A A T V C P R H Q R E H N C P - TCT 701 --- 703 AGA a - b S - c - 701 --- 703 d R - e E - f N - Enzymes that do cut: BcgI BplI Bpu10I BsaI BsaXI BsbI BseRI BsmBI BspLU11I BspMI BssSI BstEII EciI Eco47III NspV PinAI SanDI SphI StuI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI Bce83I BclI BfiI BglI BglII BpmI Bpu1102I BsaBI BsgI BsiWI BsmI BspEI BspGI BsrBI BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI EarI Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SrfI Sse8387I Sse8647I SspI SwaI Tth111I VspI XbaI XcmI XhoI XmnI