(Linear) MAP of: ./Fgr-C_02_A19_T3.seq check: 720 from: 1 to: 726 Fgr-C_02_A19_T3 0 0 0 1 726 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI BbsI HgiEII SphI | | | | | GAATTCGGCACGAGGCTTGTTCAAGGGAAAGCCCATCACAGCCGCAATCATGTCTTCCGCTGAACCCCAGAAGGTCTTGGGCATGCCCCCCTTCGTTGCT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCGAACAAGTTCCCTTTCGGGTAGTGTCGGCGTTAGTACAGAAGGCGACTTGGGGTCTTCCAGAACCCGTACGGGGGGAAGCAACGA a E F G T R L V Q G K A H H S R N H V F R * T P E G L G H A P L R C * - b N S A R G L F K G K P I T A A I M S S A E P Q K V L G M P P F V A - c I R H E A C S R E S P S Q P Q S C L P L N P R R S W A C P P S L L - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d F E A R P K N L P F G M V A A I M D E A S G W F T K P M G G K T A - e N P V L S T * P F A W * L R L * T K R Q V G S P R P C A G R R Q - f I R C S A Q E L S L G D C G C D H R G S F G L L D Q A H G G E N S - DrdII EciI BseRI Bce83I| | | || GACTTCCTCATGGGTGGTGTCTCCGCCGCTGTCTCCAAGACTGCTGCTGCCCCCATCGAGCGTGTCAAGCTCCTCATCCAGAACCAGGATGAGATGCTCA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CTGAAGGAGTACCCACCACAGAGGCGGCGACAGAGGTTCTGACGACGACGGGGGTAGCTCGCACAGTTCGAGGAGTAGGTCTTGGTCCTACTCTACGAGT a L P H G W C L R R C L Q D C C C P H R A C Q A P H P E P G * D A Q - b D F L M G G V S A A V S K T A A A P I E R V K L L I Q N Q D E M L K - c T S S W V V S P P L S P R L L L P P S S V S S S S S R T R M R C S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d S K R M P P T E A A T E L V A A A G M S R T L S R M W F W S S I S - e Q S G * P H H R R R Q R W S Q Q Q G W R A H * A G * G S G P H S A * - f V E E H T T D G G S D G L S S S G G D L T D L E E D L V L I L H E - AhdI PinAI | BsmBI NcoI | | | | AGACCGGTCGTCTCGACCGCAAGTACAACGGCATTGGTGACTGCTTCAAGCGCACCATGGCTGATGAGGGTGTCATGTCCCTCTGGCGAGGAAACACCGC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TCTGGCCAGCAGAGCTGGCGTTCATGTTGCCGTAACCACTGACGAAGTTCGCGTGGTACCGACTACTCCCACAGTACAGGGAGACCGCTCCTTTGTGGCG a D R S S R P Q V Q R H W * L L Q A H H G * * G C H V P L A R K H R - b T G R L D R K Y N G I G D C F K R T M A D E G V M S L W R G N T A - c R P V V S T A S T T A L V T A S S A P W L M R V S C P S G E E T P P - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d L V P R R S R L Y L P M P S Q K L R V M A S S P T M D R Q R P F V A - e S R D D R G C T C R C Q H S S * A C W P Q H P H * T G R A L F C R - f L G T T E V A L V V A N T V A E L A G H S I L T D H G E P S S V G - AlwNI XmnI | | CAACGTCATCCGATACTTCCCTACCCAGGCTCTGAACTTCGCTTTCCGTGACAAGTTCAAGAAGATGTTCGGTTACAAGAAGGACAAGGATGGCTACGCC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GTTGCAGTAGGCTATGAAGGGATGGGTCCGAGACTTGAAGCGAAAGGCACTGTTCAAGTTCTTCTACAAGCCAATGTTCTTCCTGTTCCTACCGATGCGG a Q R H P I L P Y P G S E L R F P * Q V Q E D V R L Q E G Q G W L R H - b N V I R Y F P T Q A L N F A F R D K F K K M F G Y K K D K D G Y A - c T S S D T S L P R L * T S L S V T S S R R C S V T R R T R M A T P - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d L T M R Y K G V W A R F K A K R S L N L F I N P * L F S L S P * A - e W R * G I S G * G P E S S R K G H C T * S S T R N C S P C P H S R - f G V D D S V E R G L S Q V E S E T V L E L L H E T V L L V L I A V G - BstXI BstEII BsaXI EarI BspGI | | | | | ATGTGGATGGCCGGTAACCTTGCCTCCGGTGGTGCTGCTGGTGCCACTTCTCTTCTATTCGTCTACTCTCTGGACTACGCCCGTACTCGTCTTGCCAACG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 TACACCTACCGGCCATTGGAACGGAGGCCACCACGACGACCACGGTGAAGAGAAGATAAGCAGATGAGAGACCTGATGCGGGCATGAGCAGAACGGTTGC a V D G R * P C L R W C C W C H F S S I R L L S G L R P Y S S C Q R - b M W M A G N L A S G G A A G A T S L L F V Y S L D Y A R T R L A N D - c C G W P V T L P P V V L L V P L L F Y S S T L W T T P V L V L P T - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d M H I A P L R A E P P A A P A V E R R N T * E R S * A R V R R A L - e W T S P R Y G Q R R H H Q Q H W K E E I R R S E P S R G Y E D Q W R - f H P H G T V K G G T T S S T G S R K * E D V R Q V V G T S T K G V - BsaI BstEII SalI AatII BbsI BsaI | | | | | ATGCCAAGAACGCCAAGTCCGGTGGTGACCGTCAGTTCAACGGTCTCGTCGACGTCTACAAGAAGACCCTCGCCTCTGACGGTATTGCCGGTCTCTACCG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TACGGTTCTTGCGGTTCAGGCCACCACTGGCAGTCAAGTTGCCAGAGCAGCTGCAGATGTTCTTCTGGGAGCGGAGACTGCCATAACGGCCAGAGATGGC a C Q E R Q V R W * P S V Q R S R R R L Q E D P R L * R Y C R S L P - b A K N A K S G G D R Q F N G L V D V Y K K T L A S D G I A G L Y R - c M P R T P S P V V T V S S T V S S T S T R R P S P L T V L P V S T V - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d S A L F A L D P P S R * N L P R T S T * L F V R A E S P I A P R * R - e H W S R W T R H H G D T * R D R R R R C S S G R R Q R Y Q R D R G - f I G L V G L G T T V T L E V T E D V D V L L G E G R V T N G T E V - BstEII BsaI BpmI PinAI | | | | | TGGTTTCATGCCCTCCGTTGCTGGTATCGTCGTCTACCGTGGTCTCTACTTCGGAATGTACGACTCTATCAAGCCCGTCGTCCTCACCGGTAACCTCCAG 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 ACCAAAGTACGGGAGGCAACGACCATAGCAGCAGATGGCACCAGAGATGAAGCCTTACATGCTGAGATAGTTCGGGCAGCAGGAGTGGCCATTGGAGGTC a W F H A L R C W Y R R L P W S L L R N V R L Y Q A R R P H R * P P G - b G F M P S V A G I V V Y R G L Y F G M Y D S I K P V V L T G N L Q - c V S C P P L L V S S S T V V S T S E C T T L S S P S S S P V T S R - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d P K M G E T A P I T T * R P R * K P I Y S E I L G T T R V P L R W - e H N * A R R Q Q Y R R R G H D R S R F T R S * * A R R G * R Y G G - f T T E H G G N S T D D D V T T E V E S H V V R D L G D D E G T V E L - GGCAACTTCCTTGCCTCTTTCGCTCT 701 ---------+---------+------ 726 CCGTTGAAGGAACGGAGAAAGCGAGA a Q L P C L F R S - b G N F L A S F A - c A T S L P L S L - 701 ---------+---------+------ 726 d P L K R A E K A R - e P C S G Q R K R E - f A V E K G R E S - Enzymes that do cut: AatII AhdI AlwNI BbsI Bce83I BpmI BsaI BsaXI BseRI BsmBI BspGI BssSI BstEII BstXI DrdII EarI EciI EcoRI HgiEII NcoI PinAI SalI SphI XmnI Enzymes that do not cut: AceIII AflII ApaI ApaBI ApaLI AscI AvrII BamHI BcgI BclI BfiI BglI BglII BplI Bpu10I Bpu1102I BsaBI BsbI BsgI BsiWI BsmI BspEI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII Bst1107I Bsu36I ClaI DraI DraIII DrdI EagI Eco47III Eco57I EcoNI EcoRV FseI FspI HindIII HpaI KpnI MfeI MluI MscI NarI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI