(Linear) MAP of: ./Fgr-C_02_A20_T3.seq check: 2805 from: 1 to: 537 Fgr-C_02_A20_T3 0 0 0 1 537 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI EarI EagI SacII | | | | | GAATTCGGCACGAGGAATTAACAACAGCAGCAACCGTCAAAATGGTCAAGAAGAGAAAGAACAACGGCCGAAACAAGAAGGGCCGCGGCCACGTCAAGCC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCTTAATTGTTGTCGTCGTTGGCAGTTTTACCAGTTCTTCTCTTTCTTGTTGCCGGCTTTGTTCTTCCCGGCGCCGGTGCAGTTCGG a E F G T R N * Q Q Q Q P S K W S R R E R T T A E T R R A A A T S S P - b N S A R G I N N S S N R Q N G Q E E K E Q R P K Q E G P R P R Q A - c I R H E E L T T A A T V K M V K K R K N N G R N K K G R G H V K P - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d F E A R P I L L L L L R * F P * S S F S C R G F C S P G R G R * A - e N P V L F * C C C C G D F H D L L S L V V A S V L L A A A V D L - f I R C S S N V V A A V T L I T L F L F F L P R F L F P R P W T L G - ApaBI AlwNI| NruI XcmI || | | CATCCGATGCAGCAACTGCTCGCGATGCACCCCCAAGGATAAGGCCATCAAGAGATTCACCATCCGCAACATGGTTGAGTCTGCTGCTATCCGTGACATC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTAGGCTACGTCGTTGACGAGCGCTACGTGGGGGTTCCTATTCCGGTAGTTCTCTAAGTGGTAGGCGTTGTACCAACTCAGACGACGATAGGCACTGTAG a S D A A T A R D A P P R I R P S R D S P S A T W L S L L L S V T S - b H P M Q Q L L A M H P Q G * G H Q E I H H P Q H G * V C C Y P * H L - c I R C S N C S R C T P K D K A I K R F T I R N M V E S A A I R D I - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d W G I C C S S A I C G W P Y P W * S I * W G C C P Q T Q Q * G H C - e G D S A A V A R S A G G L I L G D L S E G D A V H N L R S S D T V D - f M R H L L Q E R H V G L S L A M L L N V M R L M T S D A A I R S M - ScaI BbsI PstI | Eco57I | | | | TCCGATGCCTCCGTCTTCGCGGAGTACACCGTCCCCAAGATGTACCTGAAGCTGCAGTACTGTGTCTCTTGCGCCATCCACGGCAAGATTGTCCGTGTCC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AGGCTACGGAGGCAGAAGCGCCTCATGTGGCAGGGGTTCTACATGGACTTCGACGTCATGACACAGAGAACGCGGTAGGTGCCGTTCTAACAGGCACAGG a P M P P S S R S T P S P R C T * S C S T V S L A P S T A R L S V S - b R C L R L R G V H R P Q D V P E A A V L C L L R H P R Q D C P C P - c S D A S V F A E Y T V P K M Y L K L Q Y C V S C A I H G K I V R V R - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d R R H R R R R P T C R G W S T G S A A T S H R K R W G R C S Q G H G - e G I G G D E R L V G D G L H V Q L Q L V T D R A G D V A L N D T D - f E S A E T K A S Y V T G L I Y R F S C Y Q T E Q A M W P L I T R T - BglI BseRI Bsu36I | EagI BseRI | BcgI BcgI| | | | | | || | GATCCGTTGTCGGCCGACGCAACCGTGCCCCTCCTCCTCGCGTCCGCTACAACAAGGACGGCAAGAAGATCGTCCCTACTGCCCCTAAGGCTTAGATGGG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CTAGGCAACAGCCGGCTGCGTTGGCACGGGGAGGAGGAGCGCAGGCGATGTTGTTCCTGCCGTTCTTCTAGCAGGGATGACGGGGATTCCGAATCTACCC a D P L S A D A T V P L L L A S A T T R T A R R S S L L P L R L R W V - b I R C R P T Q P C P S S S R P L Q Q G R Q E D R P Y C P * G L D G - c S V V G R R N R A P P P R V R Y N K D G K K I V P T A P K A * M G - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d I R Q R G V C G H G E E E R G S C C P R C S S R G * Q G * P K S P - e S G N D A S A V T G R R R A D A V V L V A L L D D R S G R L S L H - f R D T T P R R L R A G G G R T R * L L S P L F I T G V A G L A * I P - BsmI XcmI | | TTGATACTTGGGATGGAGTCCGGTTATGATAGCAGCATTCAAAAAATGGATGGGATGAATACCTTTGGGATTATGAGACTAAGAAATTCCAAAAATCAAC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AACTATGAACCCTACCTCAGGCCAATACTATCGTCGTAAGTTTTTTACCTACCCTACTTATGGAAACCCTAATACTCTGATTCTTTAAGGTTTTTAGTTG a D T W D G V R L * * Q H S K N G W D E Y L W D Y E T K K F Q K S T - b L I L G M E S G Y D S S I Q K M D G M N T F G I M R L R N S K N Q L - c * Y L G W S P V M I A A F K K W M G * I P L G L * D * E I P K I N - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d N I S P I S D P * S L L M * F I S P I F V K P I I L S L F E L F * - e T S V Q S P T R N H Y C C E F F P H S S Y R Q S * S V L F N W F D V - f Q Y K P H L G T I I A A N L F H I P H I G K P N H S * S I G F I L - BspGI MluI | | TGGACGACGTTTGATGTCTACGCGTCTTTGACAAATT 501 ---------+---------+---------+------- 537 ACCTGCTGCAAACTACAGATGCGCAGAAACTGTTTAA a G R R L M S T R L * Q I - b D D V * C L R V F D K - c W T T F D V Y A S L T N - 501 ---------+---------+---------+------- 537 d S S S T Q H R R T K S L N - e P R R K I D V R R Q C I - f Q V V N S T * A D K V F - Enzymes that do cut: AlwNI ApaBI BbsI BcgI BglI BseRI BsmI BspGI BssSI Bsu36I EagI EarI Eco57I EcoRI MluI NruI PstI SacII ScaI XcmI Enzymes that do not cut: AatII AceIII AflII AhdI ApaI ApaLI AscI AvrII BamHI Bce83I BclI BfiI BglII BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BsgI BsiWI BsmBI BspEI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII Bst1107I BstEII BstXI ClaI DraI DraIII DrdI DrdII EciI Eco47III EcoNI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MscI NarI NcoI NdeI NgoAIV NheI NotI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SacI SalI SanDI SapI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XhoI XmnI