(Linear) MAP of: ./Fgr-C_02_A21_T3.seq check: 1342 from: 1 to: 655 Fgr-C_02_A21_T3 0 0 0 1 655 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. EcoRI BssSI KpnI BspGI Pfl1108I | | | | | GAATTCGGCACGAGGTTGGTATCTACTACAACCACGGCCAGTGCTGCTGTGCTGGTACCCGTATCTTTGTCCAGGAGTCCATCTACGACAAGTTCCTCGC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCAACCATAGATGATGTTGGTGCCGGTCACGACGACACGACCATGGGCATAGAAACAGGTCCTCAGGTAGATGCTGTTCAAGGAGCG a E F G T R L V S T T T T A S A A V L V P V S L S R S P S T T S S S L - b N S A R G W Y L L Q P R P V L L C W Y P Y L C P G V H L R Q V P R - c I R H E V G I Y Y N H G Q C C C A G T R I F V Q E S I Y D K F L A - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d I R C S T P I * * L W P W H Q Q A P V R I K T W S D M * S L N R A - e F E A R P Q Y R S C G R G T S S H Q Y G Y R Q G P T W R R C T G R - f N P V L N T D V V V V A L A A T S T G T D K D L L G D V V L E E - BpmI BseRI | BseRI SanDI | AceIII Bpu10I BstEII BsaI HgiEII | | BsaI AceIII | | | | | | | | | TGCCTTCAAGAAGCGAGCTGAGGAGAACAAGGTCGGTGACCCCTTCAACGAGGAGACCTTCCAGGGTCCCCAGGTCTCTCAGCTCCAGTACGACCGTATC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 ACGGAAGTTCTTCGCTCGACTCCTCTTGTTCCAGCCACTGGGGAAGTTGCTCCTCTGGAAGGTCCCAGGGGTCCAGAGAGTCGAGGTCATGCTGGCATAG a P S R S E L R R T R S V T P S T R R P S R V P R S L S S S T T V S - b C L Q E A S * G E Q G R * P L Q R G D L P G S P G L S A P V R P Y H - c A F K K R A E E N K V G D P F N E E T F Q G P Q V S Q L Q Y D R I - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d A K L F R A S S F L T P S G K L S S V K W P G W T E * S W Y S R I - e Q R * S A L Q P S C P R H G R * R P S R G P D G P R E A G T R G Y - f S G E L L S S L L V L D T V G E V L L G E L T G L D R L E L V V T D - BsmBI | ATGGGCTACATCAAGGCCGGTAAGGACGAGGGTGCCACCGTCGAGATCGGTGGTGAGCGTCTCGGTGACAAGGGTTACTTCATCAAGCCCACCATCTTCT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TACCCGATGTAGTTCCGGCCATTCCTGCTCCCACGGTGGCAGCTCTAGCCACCACTCGCAGAGCCACTGTTCCCAATGAAGTAGTTCGGGTGGTAGAAGA a W A T S R P V R T R V P P S R S V V S V S V T R V T S S S P P S S - b G L H Q G R * G R G C H R R D R W * A S R * Q G L L H Q A H H L L - c M G Y I K A G K D E G A T V E I G G E R L G D K G Y F I K P T I F S - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d M P * M L A P L S S P A V T S I P P S R R P S L P * K M L G V M K - e * P S C * P R Y P R P H W R R S R H H A D R H C P N S * * A W W R R - f H A V D L G T L V L T G G D L D T T L T E T V L T V E D L G G D E - EciI BseRI Bpu10I | | | CCAACGTCCGCCCCGACATGAAGATCATGCAGGAGGAGATTTTCGGCCCCGTCTGCGCTATTTCCAAGTTCAAGGACGAGGCTGAGGTCATTGACCTTGC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GGTTGCAGGCGGGGCTGTACTTCTAGTACGTCCTCCTCTAAAAGCCGGGGCAGACGCGATAAAGGTTCAAGTTCCTGCTCCGACTCCAGTAACTGGAACG a P T S A P T * R S C R R R F S A P S A L F P S S R T R L R S L T L P - b Q R P P R H E D H A G G D F R P R L R Y F Q V Q G R G * G H * P C - c N V R P D M K I M Q E E I F G P V C A I S K F K D E A E V I D L A - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d E L T R G S M F I M C S S I K P G T Q A I E L N L S S A S T M S R A - e W R G G R C S S * A P P S K R G R R R * K W T * P R P Q P * Q G Q - f G V D A G V H L D H L L L N E A G D A S N G L E L V L S L D N V K - HgiEII BsaI BsbI Bce83I | | | | CCACGACACCGCTTACGGTCTCGCTGCCGCTGTCCACACCAAGAACCTCAACACTGCCCTCCGCGTTTCCAACGCTCTCAAGGCCGGAACTGTCTGGGTG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GGTGCTGTGGCGAATGCCAGAGCGACGGCGACAGGTGTGGTTCTTGGAGTTGTGACGGGAGGCGCAAAGGTTGCGAGAGTTCCGGCCTTGACAGACCCAC a T T P L T V S L P L S T P R T S T L P S A F P T L S R P E L S G * - b P R H R L R S R C R C P H Q E P Q H C P P R F Q R S Q G R N C L G E - c H D T A Y G L A A A V H T K N L N T A L R V S N A L K A G T V W V - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d W S V A * P R A A A T W V L F R L V A R R T E L A R L A P V T Q T - e G R C R K R D R Q R Q G C W S G * C Q G G R K W R E * P R F Q R P - f G V V G S V T E S G S D V G L V E V S G E A N G V S E L G S S D P H - AceIII | AACTGCTATAACATGCTACATCACCAGCTCCCATTCGGAGGCTACAAGGAGAGTGGAATTGGACGAGAACTCGGCGAGGCAGCCCTCGCCAACTACACAC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TTGACGATATTGTACGATGTAGTGGTCGAGGGTAAGCCTCCGATGTTCCTCTCACCTTAACCTGCTCTTGAGCCGCTCCGTCGGGAGCGGTTGATGTGTG a T A I T C Y I T S S H S E A T R R V E L D E N S A R Q P S P T T H - b L L * H A T S P A P I R R L Q G E W N W T R T R R G S P R Q L H T - c N C Y N M L H H Q L P F G G Y K E S G I G R E L G E A A L A N Y T Q - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d F Q * L M S C * W S G N P P * L S L P I P R S S P S A A R A L * V - e S S S Y C A V D G A G M R L S C P S H F Q V L V R R P L G R W S C V - f V A I V H * M V L E W E S A V L L T S N S S F E A L C G E G V V C - AGAACAAGTCGGTTGCCATCAAGCTGTACTAAGCATAGCAAAGCGAATTGGGGAC 601 ---------+---------+---------+---------+---------+----- 655 TCTTGTTCAGCCAACGGTAGTTCGACATGATTCGTATCGTTTCGCTTAACCCCTG a R T S R L P S S C T K H S K A N W G - b E Q V G C H Q A V L S I A K R I G D - c N K S V A I K L Y * A * Q S E L G - 601 ---------+---------+---------+---------+---------+----- 655 d C F L D T A M L S Y * A Y C L S N P V - e S C T P Q W * A T S L M A F R I P S - f L V L R N G D L Q V L C L L A F Q P - Enzymes that do cut: AceIII Bce83I BpmI Bpu10I BsaI BsbI BseRI BsmBI BspGI BssSI BstEII EciI EcoRI HgiEII KpnI Pfl1108I SanDI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BamHI BbsI BcgI BclI BfiI BglI BglII BplI Bpu1102I BsaBI BsaXI BsgI BsiWI BsmI BspEI BspLU11I BspMI BsrBI BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI EarI Eco47III Eco57I EcoNI EcoRV FseI FspI HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XcmI XhoI XmnI