(Linear) MAP of: ./Fgr-C_02_B01_T3.seq check: 7207 from: 1 to: 426 Fgr-C_02_B01_T3 0 0 0 1 426 Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. BamHI XcmI EcoRI BssSI | Bce83I | | | | | | GAATTCGGCACGAGGATCCAATCCTCACTCACAAACACTTTCAAACAAACCAACCCCCAAACAACCAACCACTATCACAATGGAGTCCCTCAAGCAAGGT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CTTAAGCCGTGCTCCTAGGTTAGGAGTGAGTGTTTGTGAAAGTTTGTTTGGTTGGGGGTTTGTTGGTTGGTGATAGTGTTACCTCAGGGAGTTCGTTCCA a E F G T R I Q S S L T N T F K Q T N P Q T T N H Y H N G V P Q A R C - b N S A R G S N P H S Q T L S N K P T P K Q P T T I T M E S L K Q G - c I R H E D P I L T H K H F Q T N Q P P N N Q P L S Q W S P S S K V - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d F E A R P D L G * E C V S E F L G V G L C G V V I V I S D R L C P - e N P V L I W D E S V F V K L C V L G W V V L W * * L P T G * A L - f I R C S S G I R V * L C K * V F W G G F L W G S D C H L G E L L T - BsaI BsaI BspMI BsrDI | | | | GTCAACTACGTCGCTGAGACCGTTCAGCAGGCCGCCTCTGGTGCTTCCAAGGAGACCAACAAGCAGGTCGCCAAGGACAGCAATGCCCCCATCGGCACCC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CAGTTGATGCAGCGACTCTGGCAAGTCGTCCGGCGGAGACCACGAAGGTTCCTCTGGTTGTTCGTCCAGCGGTTCCTGTCGTTACGGGGGTAGCCGTGGG a Q L R R * D R S A G R L W C F Q G D Q Q A G R Q G Q Q C P H R H P - b V N Y V A E T V Q Q A A S G A S K E T N K Q V A K D S N A P I G T R - c S T T S L R P F S R P P L V L P R R P T S R S P R T A M P P S A P - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d T L * T A S V T * C A A E P A E L S V L L C T A L S L L A G M P V - e H * S R R Q S R E A P R R Q H K W P S W C A P R W P C C H G W R C G - f D V V D S L G N L L G G R T S G L L G V L L D G L V A I G G D A G - HgiEII AhdI BbsI | | | | GTGCCTCCGCTGCCAAGGACGCCCTGTCCGACAAGGCCGACGAGAAGACCCATGAGGGTAAGGCCAGCGTCCACAAGGAGGCCATCTAAGTTTGTCTTAA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CACGGAGGCGACGGTTCCTGCGGGACAGGCTGTTCCGGCTGCTCTTCTGGGTACTCCCATTCCGGTCGCAGGTGTTCCTCCGGTAGATTCAAACAGAATT a C L R C Q G R P V R Q G R R E D P * G * G Q R P Q G G H L S L S * - b A S A A K D A L S D K A D E K T H E G K A S V H K E A I * V C L N - c V P P L P R T P C P T R P T R R P M R V R P A S T R R P S K F V L I - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d R A E A A L S A R D S L A S S F V W S P L A L T W L S A M * T Q R L - e H R R Q W P R G T R C P R R S S G H P Y P W R G C P P W R L K D * - f T G G S G L V G Q G V L G V L L G M L T L G A D V L L G D L N T K - BbsI Eco57I Bst1107I | | | TCGAAGAACGACATGATACAGAAATCACCTTCTGAAGACATGGATCGCAACGGCGTTGAAAGGGAATAGCGTTGGGACTACATAGGCTGTATACACCTAC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 AGCTTCTTGCTGTACTATGTCTTTAGTGGAAGACTTCTGTACCTAGCGTTGCCGCAACTTTCCCTTATCGCAACCCTGATGTATCCGACATATGTGGATG a S K N D M I Q K S P S E D M D R N G V E R E * R W D Y I G C I H L H - b R R T T * Y R N H L L K T W I A T A L K G N S V G T T * A V Y T Y - c E E R H D T E I T F * R H G S Q R R * K G I A L G L H R L Y T P T - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d R L V V H Y L F * R R F V H I A V A N F P F L T P V V Y A T Y V * - e D F F S M I C F D G E S S M S R L P T S L S Y R Q S * M P Q I C R - f I S S R C S V S I V K Q L C P D C R R Q F P I A N P S C L S Y V G V - ACCTAATACAAACAGTCAAATACCAC 401 ---------+---------+------ 426 TGGATTATGTTTGTCAGTTTATGGTG a L I Q T V K Y H - b T * Y K Q S N T - c P N T N S Q I P - 401 ---------+---------+------ 426 d V * Y L C D F V V - e C R I C V T L Y W - f G L V F L * I G - Enzymes that do cut: AhdI BamHI BbsI Bce83I BsaI BspMI BsrDI BssSI Bst1107I Eco57I EcoRI HgiEII XcmI Enzymes that do not cut: AatII AceIII AflII AlwNI ApaI ApaBI ApaLI AscI AvrII BcgI BclI BfiI BglI BglII BplI BpmI Bpu10I Bpu1102I BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrBI BsrGI BssHII BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EagI EarI EciI Eco47III EcoNI EcoRV FseI FspI HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NotI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PstI PvuI PvuII RcaI RsrII SacI SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SmaI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XbaI XhoI XmnI