(Linear) MAP of: ./Fgr-C_02_A01_T3.seq check: 3443 from: 1 to: 948 Fgr-C_02_A01_T3 948 24 487 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:21 .. XbaI BsrBI | BstXI EagI | | EcoRI SacII| NotI | | BamHI SmaI PstI | BssSI || | | | | | | | | GGTTCAAAAAGCTGGNAGCTCCACCGCGGTGGCGGCCGCTCTAGAACAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGAAACACAAGACGACACT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCAAGTTTTTCGACCNTCGAGGTGGCGCCACCGCCGGCGAGATCTTGTCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCTTTGTGTTCTGCTGTGA a G S K S W ? L H R G G G R S R T V D P P G C R N S A R G N T R R H * - b V Q K A G S S T A V A A A L E Q W I P R A A G I R H E E T Q D D T - c F K K L ? A P P R W R P L * N S G S P G L Q E F G T R K H K T T L - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d T * F A P L E V A T A A A R S C H I G R A A P I R C S S V C S S V - e E F L Q ? S W R P P P R E L V T S G G P Q L F E A R P F V L R C - f N L F S ? A G G R H R G S * F L P D G P S C S N P V L F C L V V S - Pfl1108I BbsI | | GATTCTACGAAAACCATTATCCGTTACCTTTTTATCTTTGGTCTTCCTTTAGTAGTTCTCGTCATCTGGAACAAATTATTTAGCAGCACCAAAACGGAGA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CTAAGATGCTTTTGGTAATAGGCAATGGAAAAATAGAAACCAGAAGGAAATCATCAAGAGCAGTAGACCTTGTTTAATAAATCGTCGTGGTTTTGCCTCT a F Y E N H Y P L P F Y L W S S F S S S R H L E Q I I * Q H Q N G E - b D S T K T I I R Y L F I F G L P L V V L V I W N K L F S S T K T E R - c I L R K P L S V T F L S L V F L * * F S S S G T N Y L A A P K R R - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d S E V F V M I R * R K I K P R G K T T R T M Q F L N N L L V L V S - e Q N * S F W * G N G K * R Q D E K L L E R * R S C I I * C C W F P S - f I R R F G N D T V K K D K T K R * Y N E D D P V F * K A A G F R L - BspLU11I Eco57I BbsI | BsrBI PstI BsaI | | | | | | GGACGACAGAAGCAAACATGTCTTCAGGAAGAATCGCCCCGCTCGTATTTCCTGCAGCATCGCAGCACACTGCCACAGTCATCTTTGTTCACGGTCTCGG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CCTGCTGTCTTCGTTTGTACAGAAGTCCTTCTTAGCGGGGCGAGCATAAAGGACGTCGTAGCGTCGTGTGACGGTGTCAGTAGAAACAAGTGCCAGAGCC a D D R S K H V F R K N R P A R I S C S I A A H C H S H L C S R S R - b T T E A N M S S G R I A P L V F P A A S Q H T A T V I F V H G L G - c G R Q K Q T C L Q E E S P R S Y F L Q H R S T L P Q S S L F T V S V - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d L V V S A F M D E P L I A G S T N G A A D C C V A V T M K T * P R P - e S S L L L C T K L F F R G A R I E Q L M A A C Q W L * R Q E R D R - f P R C F C V H R * S S D G R E Y K R C C R L V S G C D D K N V T E - NgoAIV SgrAI BspGI Eco47III NarI | | | | | TGACACTGGACATGGCTGGGCAAGCGCTGTTGAGAACTGGCGCCGGCGACAGAAGATGGATGAGGTCAAGTTCATTCTGCCCCATGCACCCCAAATCCCT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 ACTGTGACCTGTACCGACCCGTTCGCGACAACTCTTGACCGCGGCCGCTGTCTTCTACCTACTCCAGTTCAAGTAAGACGGGGTACGTGGGGTTTAGGGA a * H W T W L G K R C * E L A P A T E D G * G Q V H S A P C T P N P Y - b D T G H G W A S A V E N W R R R Q K M D E V K F I L P H A P Q I P - c T L D M A G Q A L L R T G A G D R R W M R S S S F C P M H P K S L - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S V P C P Q A L A T S F Q R R R C F I S S T L N M R G W A G W I G - e H C Q V H S P L R Q Q S S A G A V S S P H P * T * E A G H V G F G - f T V S S M A P C A S N L V P A P S L L H I L D L E N Q G M C G L D R - SalI BsmI EcoRV BsaXI | | | | | ATCAGCGTGAACATGGGAATGAGAATGCCTGGATGGTTTGATATCAAACAACTTGGAGGTGATGTCGACTCTCTCATCCGCAACGAGGACACCGAGGGCA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 TAGTCGCACTTGTACCCTTACTCTTACGGACCTACCAAACTATAGTTTGTTGAACCTCCACTACAGCTGAGAGAGTAGGCGTTGCTCCTGTGGCTCCCGT a Q R E H G N E N A W M V * Y Q T T W R * C R L S H P Q R G H R G H - b I S V N M G M R M P G W F D I K Q L G G D V D S L I R N E D T E G I - c S A * T W E * E C L D G L I S N N L E V M S T L S S A T R T P R A - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d I L T F M P I L I G P H N S I L C S P P S T S E R M R L S S V S P - e * * R S C P F S F A Q I T Q Y * V V Q L H H R S E * G C R P C R P C - f D A H V H S H S H R S P K I D F L K S T I D V R E D A V L V G L A - Bpu1102I ScaI | | TTAAGCTCAGCCAAAAGTACTTCCACAATCTCATCCAACAAGAGATTGATTCGGGGAATCGTCCCTGAACGCATTGGTTTTGGGGGGCTTTTCCCAGGGG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 AATTCGAGTCGGTTTTCATGAAGGTGTTAGAGTAGGTTGTTCTCTAACTAAGCCCCTTAGCAGGGACTTGCGTAACCAAAACCCCCCGAAAAGGGTCCCC a * A Q P K V L P Q S H P T R D * F G E S S L N A L V L G G F S Q G - b K L S Q K Y F H N L I Q Q E I D S G N R P * T H W F W G A F P R G - c L S S A K S T S T I S S N K R L I R G I V P E R I G F G G L F P G G - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d M L S L W F Y K W L R M W C S I S E P F R G Q V C Q N Q P A K G L P - e * A * G F T S G C D * G V L S Q N P S D D R F A N T K P P K E W P - f N L E A L L V E V I E D L L L N I R P I T G S R M P K P P S K G P - NgoAIV | GGGGGCCTTGGTTTTTTCCTTGCCGGCCTTACCTGGGACAAGCAAAGCTGGGGGGGGAATCCCTTGGGGCCTTTCATTTTTGGGGGGGGCGCTAATCCAA 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CCCCCGGAACCAAAAAAGGAACGGCCGGAATGGACCCTGTTCGTTTCGACCCCCCCCTTAGGGAACCCCGGAAAGTAAAAACCCCCCCCGCGATTAGGTT a G G L G F F L A G L T W D K Q S W G G N P L G P F I F G G G A N P K - b G A L V F S L P A L P G T S K A G G G I P W G L S F L G G A L I Q - c G P W F F P C R P Y L G Q A K L G G E S L G A F H F W G G R * S K - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d P A K T K E K G A K G P V L L A P P P I G Q P R E N K P P A S I W - e P P R P K K R A P R V Q S L C L Q P P F G K P G K M K P P P A L G - f P P G Q N K G Q R G * R P C A F S P P S D R P A K * K Q P P R * D L - BpmI EcoNI SanDI | | | AAACCCTTTTGGCCGCACGGTGGGTAAAACCTCCAGAAGGGCCACACCGCCGGAAAAATCGTCGCGGATATAAGTCCCACCGTGGGGAAAAAGGGGACCC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 TTTGGGAAAACCGGCGTGCCACCCATTTTGGAGGTCTTCCCGGTGTGGCGGCCTTTTTAGCAGCGCCTATATTCAGGGTGGCACCCCTTTTTCCCCTGGG a T L L A A R W V K P P E G P H R R K N R R G Y K S H R G E K G D P - b K P F W P H G G * N L Q K G H T A G K I V A D I S P T V G K K G T L - c N P F G R T V G K T S R R A T P P E K S S R I * V P P W G K R G P - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d F G K Q G C P P Y F R W F P W V A P F I T A S I L G V T P F F P V - e F V R K A A R H T F G G S P G C R R F F R R P Y L D W R P S F P S G - f F G K P R V T P L V E L L A V G G S F D D R I Y T G G H P F L P G - EarI BssSI | | TCTTTGGCNCTCTCTTGTACGAGGTGGGGAAGAGTGATATGCGCCCACACGAGCGTTTGAGGGAGGGGATTGGGATGCTCAACAGGCTGGTGGTGGGAGA 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 AGAAACCGNGAGAGAACATGCTCCACCCCTTCTCACTATACGCGGGTGTGCTCGCAAACTCCCTCCCCTAACCCTACGAGTTGTCCGACCACCACCCTCT a L W ? S L V R G G E E * Y A P T R A F E G G D W D A Q Q A G G G R - b F G ? L L Y E V G K S D M R P H E R L R E G I G M L N R L V V G E - c S L A L S C T R W G R V I C A H T S V * G R G L G C S T G W W W E K - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d R K P ? R K Y S T P F L S I R G C S R K L S P I P I S L L S T T P S - e R Q ? E R T R P P S S H Y A G V R A N S P P S Q S A * C A P P P L - f E K A ? E Q V L H P L T I H A W V L T Q P L P N P H E V P Q H H S - BspMI | AACCACCACTCTTGCCGGAGGTGGGGAAAACCTTGCAGGTGTATCCTT 901 ---------+---------+---------+---------+-------- 948 TTGGTGGTGAGAACGGCCTCCACCCCTTTTGGAACGTCCACATAGGAA a N H H S C R R W G K P C R C I L - b T T T L A G G G E N L A G V S - c P P L L P E V G K T L Q V Y P - 901 ---------+---------+---------+---------+-------- 948 d V V V R A P P P S F R A P T D K - e F W W E Q R L H P F G Q L H I R - f F G G S K G S T P F V K C T Y G - Enzymes that do cut: BamHI BbsI BpmI Bpu1102I BsaI BsaXI BsmI BspGI BspLU11I BspMI BsrBI BssSI BstXI EagI EarI Eco47III Eco57I EcoNI EcoRI EcoRV NarI NgoAIV NotI Pfl1108I PstI SacII SalI SanDI ScaI SgrAI SmaI XbaI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII Bce83I BcgI BclI BfiI BglI BglII BplI Bpu10I BsaBI BsbI BseRI BsgI BsiWI BsmBI BspEI BsrDI BsrGI BssHII Bst1107I BstEII Bsu36I ClaI DraI DraIII DrdI DrdII EciI FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NcoI NdeI NheI NruI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SacI SapI SexAI SfiI SgfI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XcmI XhoI XmnI