(Linear) MAP of: ./Fgr-C_02_A02_T3.seq check: 8476 from: 1 to: 914 Fgr-C_02_A02_T3 914 2 635 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:19 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | BamHI SmaI PstI | BssSI | | | | | | | | | | | CAAAGCTGGAGCTCACCGCGGTGGCGGCCGCTCTAGAACAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGTACAACTACAACAATCGCTATACCA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 GTTTCGACCTCGAGTGGCGCCACCGCCGGCGAGATCTTGTCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCATGTTGATGTTGTTAGCGATATGGT a Q S W S S P R W R P L * N S G S P G L Q E F G T R Y N Y N N R Y T N - b K A G A H R G G G R S R T V D P P G C R N S A R G T T T T I A I P - c K L E L T A V A A A L E Q W I P R A A G I R H E V Q L Q Q S L Y Q - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d L Q L E G R H R G S * F L P D G P S C S N P V L Y L * L L R * V - e F S S S V A T A A A R S C H I G R A A P I R C S T C S C C D S Y W - f L A P A * R P P P R E L V T S G G P Q L F E A R P V V V V I A I G - BsbI DraI | | ACACTCGTTTAAATAACCTCGATCTACTTCTCTTTCAACCTTTTACTCAAACCAAACCCAACAAACCAAACCAACCTTCAAAATGCACGCCTCCGCTGCC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TGTGAGCAAATTTATTGGAGCTAGATGAAGAGAAAGTTGGAAAATGAGTTTGGTTTGGGTTGTTTGGTTTGGTTGGAAGTTTTACGTGCGGAGGCGACGG a T R L N N L D L L L F Q P F T Q T K P N K P N Q P S K C T P P L P - b T L V * I T S I Y F S F N L L L K P N P T N Q T N L Q N A R L R C R - c H S F K * P R S T S L S T F Y S N Q T Q Q T K P T F K M H A S A A - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d L V R K F L R S R S R K * G K V * V L G L L G F W G E F H V G G S G - e C E N L Y G R D V E R E V K * E F W V W C V L G V K L I C A E A A - f V S T * I V E I * K E K L R K S L G F G V F W V L R * F A R R R Q - GTCCTCGCTTTCGTCGCTGTTGCGGCTGCTGCCCAGACCCCTGTGGCCCCCGTTGCTACTCCCATCGCTACTCCCGGTGCCCCTACCAACGGTACTAAGC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CAGGAGCGAAAGCAGCGACAACGCCGACGACGGGTCTGGGGACACCGGGGGCAACGATGAGGGTAGCGATGAGGGCCACGGGGATGGTTGCCATGATTCG a S S L S S L L R L L P R P L W P P L L L P S L L P V P L P T V L S - b P R F R R C C G C C P D P C G P R C Y S H R Y S R C P Y Q R Y * A - c V L A F V A V A A A A Q T P V A P V A T P I A T P G A P T N G T K P - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d D E S E D S N R S S G L G R H G G N S S G D S S G T G R G V T S L - e T R A K T A T A A A A W V G T A G T A V G M A V G P A G V L P V L - f R G R K R R Q Q P Q Q G S G Q P G R Q * E W R * E R H G * W R Y * A - BspEI DrdII | DrdII NarI | | | | CCGGTCACGGCTCTGGCTCTGGTTCCGGATCTGGTTCCGGCTCCGGCTCCCAGACCCCCTCCGGCGCCGCCGCCCTTGGCCTCAGTGGTCTTGCTGGTGC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GGCCAGTGCCGAGACCGAGACCAAGGCCTAGACCAAGGCCGAGGCCGAGGGTCTGGGGGAGGCCGCGGCGGCGGGAACCGGAGTCACCAGAACGACCACG a P V T A L A L V P D L V P A P A P R P P P A P P P L A S V V L L V P - b R S R L W L W F R I W F R L R L P D P L R R R R P W P Q W S C W C - c G H G S G S G S G S G S G S G S Q T P S G A A A L G L S G L A G A - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d G T V A R A R T G S R T G A G A G L G G G A G G G K A E T T K S T - e G P * P E P E P E P D P E P E P E W V G E P A A A R P R L P R A P A - f R D R S Q S Q N R I Q N R S R S G S G R R R R R G Q G * H D Q Q H - BsrDI BplI BamHI HgiEII | | | | CCTCGCCATTGCTCTTGCTCTGTAAATGTCTTTCAATGAGACTTTCTCAGAGTTGGTGGATATGAGGATCCTGCGACAGACAACCTTGTAGGGTTCTGGA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GGAGCGGTAACGAGAACGAGACATTTACAGAAAGTTACTCTGAAAGAGTCTCAACCACCTATACTCCTAGGACGCTGTCTGTTGGAACATCCCAAGACCT a S P L L L L C K C L S M R L S Q S W W I * G S C D R Q P C R V L E - b P R H C S C S V N V F Q * D F L R V G G Y E D P A T D N L V G F W R - c L A I A L A L * M S F N E T F S E L V D M R I L R Q T T L * G S G - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d G E G N S K S Q L H R E I L S E * L Q H I H P D Q S L C G Q L T R S - e R A M A R A R Y I D K L S V K E S N T S I L I R R C V V K Y P E P - f G R W Q E Q E T F T K * H S K R L T P P Y S S G A V S L R T P N Q - BsaXI BpmI BpmI | | | GGAATCGTGCTGGTGCGCGTTTAACTTTCGATGGAGATAGATCGGGTTTTCGATTGTCCCGACTAGAATAGAATAGATCAATGGAGCGTGATCGCTCCAG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CCTTAGCACGACCACGCGCAAATTGAAAGCTACCTCTATCTAGCCCAAAAGCTAACAGGGCTGATCTTATCTTATCTAGTTACCTCGCACTAGCGAGGTC a E S C W C A F N F R W R * I G F S I V P T R I E * I N G A * S L Q - b N R A G A R L T F D G D R S G F R L S R L E * N R S M E R D R S S - c G I V L V R V * L S M E I D R V F D C P D * N R I D Q W S V I A P A - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d S D H Q H A N L K R H L Y I P N E I T G V L I S Y I L P A H D S W - e P I T S T R T * S E I S I S R T K S Q G S * F L I S * H L T I A G - f L F R A P A R K V K S P S L D P K R N D R S S Y F L D I S R S R E L - VspI XhoI ApaI KpnI EciI | | | | | CTACATTAATACTAATCGCATACCACCAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCCCCCTATAGTGAGGCGGATTA 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 GATGTAATTATGATTAGCGTATGGTGGTTTTTTTTTTTTTTTTTTTTTTTTTGAGCTCCCCCCCGGGCCATGGGTTAAGGGGGATATCACTCCGCCTAAT a L H * Y * S H T T K K K K K K K K T R G G A R Y P I P P I V R R I T - b Y I N T N R I P P K K K K K K K K L E G G P G T Q F P L * * G G L - c T L I L I A Y H Q K K K K K K K N S R G G P V P N S P Y S E A D Y - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d S C * Y * D C V V L F F F F F F F V R P P A R Y G I G G I T L R I - e A V N I S I A Y W W F F F F F F F F E L P P G T G L E G * L S A S * - f * M L V L R M G G F F F F F F F F S S P P G P V W N G R Y H P P N - NgoAIV BfiI BfiI | | | CAATTCACTGGCCGGCGGTTTACAACCTCGGGACTGGGAAAACCCTGCCGTACCCAACTTAATCGCCTGGCAGAACATCCCCTTTCCCCAGTTGGGGTTA 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 GTTAAGTGACCGGCCGCCAAATGTTGGAGCCCTGACCCTTTTGGGACGGCATGGGTTGAATTAGCGGACCGTCTTGTAGGGGAAAGGGGTCAACCCCAAT a I H W P A V Y N L G T G K T L P Y P T * S P G R T S P F P S W G Y - b Q F T G R R F T T S G L G K P C R T Q L N R L A E H P L S P V G V I - c N S L A G G L Q P R D W E N P A V P N L I A W Q N I P F P Q L G L - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d V I * Q G A T * L R P V P F V R G Y G V * D G P L V D G K G L Q P * - e L E S A P P K C G R S Q S F G A T G L K I A Q C F M G K G W N P N - f C N V P R R N V V E P S P F G Q R V W S L R R A S C G R E G T P T - XcmI MfeI DraI | | | TATCCAAGAAGGCCCGCACCGATCCCCTTTCCCACAAGTTGCCCAACCTGAATATGGAAATGGACAATTGAAACCCTTATATATTTGTTTAAAAATTCGC 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 ATAGGTTCTTCCGGGCGTGGCTAGGGGAAAGGGTGTTCAACGGGTTGGACTTATACCTTTACCTGTTAACTTTGGGAATATATAAACAAATTTTTAAGCG a I Q E G P H R S P F P Q V A Q P E Y G N G Q L K P L Y I C L K I R - b S K K A R T D P L S H K L P N L N M E M D N * N P Y I F V * K F A - c Y P R R P A P I P F P T S C P T * I W K W T I E T L I Y L F K N S R - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d I W S P G C R D G K G C T A W G S Y P F P C N F G K Y I Q K F I R - e Y G L L G A G I G K G V L Q G V Q I H F H V I S V R I Y K N L F E - f I D L F A R V S G R E W L N G L R F I S I S L Q F G * I N T * F N A - GTGAAATTGTTGGT 901 ---------+---- 914 CACTTTAACAACCA a V K L L - b * N C W - c E I V G - 901 ---------+---- 914 d T F N N T - e R S I T P - f H F Q Q - Enzymes that do cut: ApaI BamHI BfiI BplI BpmI BsaXI BsbI BspEI BsrBI BsrDI BssSI DraI DrdII EagI EciI EcoRI HgiEII KpnI MfeI NarI NgoAIV NotI PstI SacI SacII SmaI VspI XbaI XcmI XhoI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI Bce83I BcgI BclI BglI BglII Bpu10I Bpu1102I BsaI BsaBI BseRI BsgI BsiWI BsmI BsmBI BspGI BspLU11I BspMI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraIII DrdI EarI Eco47III Eco57I EcoNI EcoRV FseI FspI HindIII HpaI MluI MscI NcoI NdeI NheI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I XmnI