(Linear) MAP of: ./Fgr-C_02_A07_T3.seq check: 7795 from: 1 to: 964 Fgr-C_02_A07_T3 964 2 636 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | BamHI SmaI PstI | BssSI MscI | | | | | | | | | | | | CAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCCAAGGATGGCCAGACCCGTGAGCA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 GTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGTCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCGGTTCCTACCGGTCTGGGCACTCGT a Q S W S S P R W R P L * N S G S P G L Q E F G T R P R M A R P V S T - b K A G A P R G G G R S R T V D P P G C R N S A R G Q G W P D P * A - c K L E L P A V A A A L E Q W I P R A A G I R H E A K D G Q T R E H - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d F S S S G A T A A A R S C H I G R A A P I R C S A L S P W V R S C - e L A P A G R P P P R E L V T S G G P Q L F E A R P W P H G S G H A - f L Q L E G R H R G S * F L P D G P S C S N P V L G L I A L G T L - DraIII XcmI PflMI BsaI | | | CGCTCTCCTTGCCTACACCCTTGGTGTCAAGAACCTCATTGTTGCCATCAACAAGATGGACACCACCAAGTGGTCTGAGGCCCGTTACCAGGAGATCATC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GCGAGAGGAACGGATGTGGGAACCACAGTTCTTGGAGTAACAACGGTAGTTGTTCTACCTGTGGTGGTTCACCAGACTCCGGGCAATGGTCCTCTAGTAG a L S L P T P L V S R T S L L P S T R W T P P S G L R P V T R R S S - b R S P C L H P W C Q E P H C C H Q Q D G H H Q V V * G P L P G D H Q - c A L L A Y T L G V K N L I V A I N K M D T T K W S E A R Y Q E I I - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d A R R A * V R P T L F R M T A M L L I S V V L H D S A R * W S I M - e R E G Q R C G Q H * S G * Q Q W * C S P C W W T T Q P G N G P S * - f V S E K G V G K T D L V E N N G D V L H V G G L P R L G T V L L D D - EarI | AAGGAGACCTCTTCTTTCATCAAGAAGGTCGGCTACAACCCCAAGGCTGTCGCTTTCGTCCCCATCTCCGGTTTCAACGGTGACAACATGCTTACTGCCT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TTCCTCTGGAGAAGAAAGTAGTTCTTCCAGCCGATGTTGGGGTTCCGACAGCGAAAGCAGGGGTAGAGGCCAAAGTTGCCACTGTTGTACGAATGACGGA a R R P L L S S R R S A T T P R L S L S S P S P V S T V T T C L L P - b G D L F F H Q E G R L Q P Q G C R F R P H L R F Q R * Q H A Y C L - c K E T S S F I K K V G Y N P K A V A F V P I S G F N G D N M L T A S - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d L S V E E K M L F T P * L G L A T A K T G M E P K L P S L M S V A - e * P S R K K * * S P R S C G W P Q R K R G W R R N * R H C C A * Q R - f L L G R R E D L L D A V V G L S D S E D G D G T E V T V V H K S G - BspEI EcoNI Bce83I | | | CCACCAACTGCCCCTGGTACAAGGGTTGGGAGCGTGAGATCAAGTCTGGCAAGCTCTCCGGAAAGACCCTCCTTGAGGCCATTGACTCCATCGAGCCCCC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GGTGGTTGACGGGGACCATGTTCCCAACCCTCGCACTCTAGTTCAGACCGTTCGAGAGGCCTTTCTGGGAGGAACTCCGGTAACTGAGGTAGCTCGGGGG a P P T A P G T R V G S V R S S L A S S P E R P S L R P L T P S S P P - b H Q L P L V Q G L G A * D Q V W Q A L R K D P P * G H * L H R A P - c T N C P W Y K G W E R E I K S G K L S G K T L L E A I D S I E P P - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d E V L Q G Q Y L P Q S R S I L D P L S E P F V R R S A M S E M S G G - e W W S G R T C P N P A H S * T Q C A R R F S G G Q P W Q S W R A G - f G G V A G P V L T P L T L D L R A L E G S L G E K L G N V G D L G - BpmI BsaXI EagI | | | CAAGCGTCCCAACGACAAGCCCCTCCGACTTCCCCTCCAGGATGTCTACAAGATTGGCGGTATTGGAACGGTTCCTGTCGGCCGTATCGAGACTGGTATC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GTTCGCAGGGTTGCTGTTCGGGGAGGCTGAAGGGGAGGTCCTACAGATGTTCTAACCGCCATAACCTTGCCAAGGACAGCCGGCATAGCTCTGACCATAG a S V P T T S P S D F P S R M S T R L A V L E R F L S A V S R L V S - b Q A S Q R Q A P P T S P P G C L Q D W R Y W N G S C R P Y R D W Y H - c K R P N D K P L R L P L Q D V Y K I G G I G T V P V G R I E T G I - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d L R G L S L G R R S G R W S T * L I P P I P V T G T P R I S V P I - e W A D W R C A G G V E G G P H R C S Q R Y Q F P E Q R G Y R S Q Y - f G L T G V V L G E S K G E L I D V L N A T N S R N R D A T D L S T D - BssSI BsaXI Eco57I | AceIII | | | | ATCAAGCCCGGTATGGTCGTTACCTTCGCTCCTTCCAACGTCACCACTGAAGTCAAGTCCGTTGAGATGCACCACGAGCAGCTCACTGAGGGACAGCCCG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TAGTTCGGGCCATACCAGCAATGGAAGCGAGGAAGGTTGCAGTGGTGACTTCAGTTCAGGCAACTCTACGTGGTGCTCGTCGAGTGACTCCCTGTCGGGC a S S P V W S L P S L L P T S P L K S S P L R C T T S S S L R D S P - b Q A R Y G R Y L R S F Q R H H * S Q V R * D A P R A A H * G T A R - c I K P G M V V T F A P S N V T T E V K S V E M H H E Q L T E G Q P G - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d M L G P I T T V K A G E L T V V S T L D T S I C W S C S V S P C G - e * * A R Y P R * R R E K W R * W Q L * T R Q S A G R A A * Q P V A R - f D L G T H D N G E S R G V D G S F D L G N L H V V L L E S L S L G - Psp1406I Psp1406I NcoI | | | GTGACAACGTTGGTTTCAACGTGAAGAACGTTTCCGTCAAGGACATCCGACGTGGTAACGTCGCTGGTGACTCCAAGACGACCCCCCCATGGGTGCCGCT 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CACTGTTGCAACCAAAGTTGCACTTCTTGCAAAGGCAGTTCCTGTAGGCTGCACCATTGCAGCGACCACTGAGGTTCTGCTGGGGGGGTACCCACGGCGA a V T T L V S T * R T F P S R T S D V V T S L V T P R R P P H G C R F - b * Q R W F Q R E E R F R Q G H P T W * R R W * L Q D D P P M G A A - c D N V G F N V K N V S V K D I R R G N V A G D S K T T P P W V P L - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d P S L T P K L T F F T E T L S M R R P L T A P S E L V V G G H T G S - e H C R Q N * R S S R K R * P C G V H Y R R Q H S W S S G G M P A A - f T V V N T E V H L V N G D L V D S T T V D S T V G L R G G W P H R - MscI BglI | BglI | | | TTTTCACCGCCAGGTCATCGTCCTCACCCCCCCGGTCAGGTCGGGCTGGTACGCTCCCGTCCTCGATTGCCACACTGGCCACATTGGCTGCAAGTTCGCC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 AAAAGTGGCGGTCCAGTAGCAGGAGTGGGGGGGCCAGTCCAGCCCGACCATGCGAGGGCAGGAGCTAACGGTGTGACCGGTGTAACCGACGTTCAAGCGG a F T A R S S S S P P R S G R A G T L P S S I A T L A T L A A S S P - b F S P P G H R P H P P G Q V G L V R S R P R L P H W P H W L Q V R R - c F H R Q V I V L T P P V R S G W Y A P V L D C H T G H I G C K F A - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d K * R W T M T R V G G T L D P Q Y A G T R S Q W V P W M P Q L N A - e K E G G P * R G * G G P * T P S T R E R G R N G C Q G C Q S C T R - f K K V A L D D D E G G R D P R A P V S G D E I A V S A V N A A L E G - NgoAIV PinAI BglII SanDI | | | | GAATCCAGGAAAGACCGCCGGCCAACCGGTAGGTTTCTGAGGCCGCCCCCAGATCTTCAAGTTTGGGGACTCGCCTCGTCAAAAGGGTCCCTCCAACCCA 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 CTTAGGTCCTTTCTGGCGGCCGGTTGGCCATCCAAAGACTCCGGCGGGGGTCTAGAAGTTCAAACCCCTGAGCGGAGCAGTTTTCCCAGGGAGGTTGGGT a N P G K T A G Q P V G F * G R P Q I F K F G D S P R Q K G P S N P - b I Q E R P P A N R * V S E A A P R S S S L G T R L V K R V P P T Q - c E S R K D R R P T G R F L R P P P D L Q V W G L A S S K G S L Q P R - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d S D L F S R R G V P L N R L G G G S R * T Q P S A E D F P D R W G - e R I W S L G G A L R Y T E S A A G L D E L K P V R R T L L T G G V W - f F G P F V A P W G T P K Q P R G W I K L N P S E G R * F P G E L G - HgiEII | GGTTGTTGAGGGTTTACCGACTACCTTCTTGGGTCTTTTCGCCCGCCGGACATGGAAAGACCAA 901 ---------+---------+---------+---------+---------+---------+---- 964 CCAACAACTCCCAAATGGCTGATGGAAGAACCCAGAAAAGCGGGCGGCCTGTACCTTTCTGGTT a G C * G F T D Y L L G S F R P P D M E R P - b V V E G L P T T F L G L F A R R T W K D Q - c L L R V Y R L P S W V F S P A G H G K T - 901 ---------+---------+---------+---------+---------+---------+---- 964 d L N N L T * R S G E Q T K E G A P C P F V L - e T T S P K G V V K K P R K A R R V H F S W - f P Q Q P N V S * R R P D K R G G S M S L G - Enzymes that do cut: AceIII BamHI Bce83I BglI BglII BpmI BsaI BsaXI BspEI BsrBI BssSI DraIII EagI EarI Eco57I EcoNI EcoRI HgiEII MscI NcoI NgoAIV NotI PflMI PinAI Psp1406I PstI SacI SacII SanDI SmaI XbaI XcmI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BbsI BcgI BclI BfiI BplI Bpu10I Bpu1102I BsaBI BsbI BseRI BsgI BsiWI BsmI BsmBI BspGI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DrdI DrdII EciI Eco47III EcoRV FseI FspI HindIII HpaI KpnI MfeI MluI NarI NdeI NheI NruI NsiI NspV PacI Pfl1108I PmeI PmlI PshAI PvuI PvuII RcaI RsrII SalI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XhoI XmnI