(Linear) MAP of: ./Fgr-C_02_A10_T3.seq check: 3040 from: 1 to: 967 Fgr-C_02_A10_T3 967 6 749 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI StuI BstEII | | | | | | | | | | | | | | GGGGAAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGGAACAGCAAGGCCTTTGAG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCCTTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCCTTGTCGTTCCGGAAACTC a G E K A G A P R G G G R S R T S G S P G L Q E F G T R E Q Q G L * G - b G K K L E L P A V A A A L E L V D P P G C R N S A R G N S K A F E - c G K S W S S P R W R P L * N * W I P R A A G I R H E G T A R P L R - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P F L Q L E G R H R G S * F * H I G R A A P I R C S P V A L G K L - e P F F S S S G A T A A A R S S T S G G P Q L F E A R P F L L A K S - f S F A P A G R P P P R E L V L P D G P S C S N P V L S C C P R Q - HgiEII DrdI NarI | | | GTCACCATCGTCGGTCCCGAAGCCAAGGTCATCTCGGACCAGGGTGTCGTCGTTGGCGCCCAGATCACCTACAAGGAGGCACACGACCGTCTTGAGGACT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CAGTGGTAGCAGCCAGGGCTTCGGTTCCAGTAGAGCCTGGTCCCACAGCAGCAACCGCGGGTCTAGTGGATGTTCCTCCGTGTGCTGGCAGAACTCCTGA a H H R R S R S Q G H L G P G C R R W R P D H L Q G G T R P S * G L - b V T I V G P E A K V I S D Q G V V V G A Q I T Y K E A H D R L E D F - c S P S S V P K P R S S R T R V S S L A P R S P T R R H T T V L R T - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d D G D D T G F G L D D R V L T D D N A G L D G V L L C V V T K L V - e T V M T P G S A L T M E S W P T T T P A W I V * L S A C S R R S S - f P * W R R D R L W P * R P G P H R R Q R G S * R C P P V R G D Q P S - Eco57I EcoRV Bce83I BclI | | | | | TTGATATCCTCGTCGTCGTCGGTGGTAACTCCAAGGAGGTTGTCGCCAAAGAGCTTCAACCCCTCTCCCTGATCACCGACTTCTCAGAGCTTCAGAAGCG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 AACTATAGGAGCAGCAGCAGCCACCATTGAGGTTCCTCCAACAGCGGTTTCTCGAAGTTGGGGAGAGGGACTAGTGGCTGAAGAGTCTCGAAGTCTTCGC a * Y P R R R R W * L Q G G C R Q R A S T P L P D H R L L R A S E A - b D I L V V V G G N S K E V V A K E L Q P L S L I T D F S E L Q K R - c L I S S S S S V V T P R R L S P K S F N P S P * S P T S Q S F R S V - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d K I D E D D D T T V G L L N D G F L K L G E G Q D G V E * L K L L - e K S I R T T T P P L E L S T T A L S S * G R E R I V S K E S S * F R - f Q Y G R R R R H Y S W P P Q R W L A E V G R G S * R S R L A E S A - NruI PinAI BsrBI | BsgI SgrAI EarI | | | | | TGATCCCGCTCGCGAGCGCACGATCCTCTCTATCTGCACCGGTGCCCTCTTCCTTGGCAAGCAGGGCATCCTCTCTGGCTTGTCTGCCACCACCCACCCC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 ACTAGGGCGAGCGCTCGCGTGCTAGGAGAGATAGACGTGGCCACGGGAGAAGGAACCGTTCGTCCCGTAGGAGAGACCGAACAGACGGTGGTGGGTGGGG a * S R S R A H D P L Y L H R C P L P W Q A G H P L W L V C H H P P R - b D P A R E R T I L S I C T G A L F L G K Q G I L S G L S A T T H P - c I P L A S A R S S L S A P V P S S L A S R A S S L A C L P P P T P - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d T I G S A L A R D E R D A G T G E E K A L L A D E R A Q R G G G V G - e S G A R S R V I R E I Q V P A R K R P L C P M R E P K D A V V W G - f H D R E R A C S G R * R C R H G R G Q C A P C G R Q S T Q W W G G - SspI BpmI | | GATTACCTTACTTCATTTGAGAATATTTGCAGCGATGCTGCTACCGTAAACCTCCAGGAGCGTACCGATGTGGTAGAGGACGCTCGTTATGTTGTCAACA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CTAATGGAATGAAGTAAACTCTTATAAACGTCGCTACGACGATGGCATTTGGAGGTCCTCGCATGGCTACACCATCTCCTGCGAGCAATACAACAGTTGT a L P Y F I * E Y L Q R C C Y R K P P G A Y R C G R G R S L C C Q Q - b D Y L T S F E N I C S D A A T V N L Q E R T D V V E D A R Y V V N N - c I T L L H L R I F A A M L L P * T S R S V P M W * R T L V M L S T - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d I V K S * K L I N A A I S S G Y V E L L T G I H Y L V S T I N D V - e S * R V E N S F I Q L S A A V T F R W S R V S T T S S A R * T T L - f R N G * K M Q S Y K C R H Q * R L G G P A Y R H P L P R E N H Q * C - BspMI EciI AatII | | | ACCTGCGATTCGATCTCGGGGAGGACGAGAGCCCATACATCCGCCGCAAGTCCGATGCTGGTCAGGGACGTCGCCCTTCGGCAGCCCGAAAGGGAAGCAT 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TGGACGCTAAGCTAGAGCCCCTCCTGCTCTCGGGTATGTAGGCGGCGTTCAGGCTACGACCAGTCCCTGCAGCGGGAAGCCGTCGGGCTTTCCCTTCGTA a P A I R S R G G R E P I H P P Q V R C W S G T S P F G S P K G K H - b L R F D L G E D E S P Y I R R K S D A G Q G R R P S A A R K G S M - c T C D S I S G R T R A H T S A A S P M L V R D V A L R Q P E R E A C - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d V Q S E I E P L V L A W V D A A L G I S T L S T A R R C G S L S A - e L R R N S R P S S S L G Y M R R L D S A P * P R R G E A A R F P L M - f G A I R D R P P R S G M C G G C T R H Q D P V D G K P L G F P F C - BsbI DraIII MfeI DrdI BsaI BspEI | | | | | | GTCGTTCAAGGACTCCAACACACGCCGTGAGTCAATTGTTCGTCGTGCCGCCATGCGACTTGGTGGTCTCCGTGTGGTGACATCCGGAGGTGTCAGCTCT 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CAGCAAGTTCCTGAGGTTGTGTGCGGCACTCAGTTAACAAGCAGCACGGCGGTACGCTGAACCACCAGAGGCACACCACTGTAGGCCTCCACAGTCGAGA a V V Q G L Q H T P * V N C S S C R H A T W W S P C G D I R R C Q L W - b S F K D S N T R R E S I V R R A A M R L G G L R V V T S G G V S S - c R S R T P T H A V S Q L F V V P P C D L V V S V W * H P E V S A L - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d H R E L V G V C A T L * N N T T G G H S K T T E T H H C G S T D A R - e D N L S E L V R R S D I T R R A A M R S P P R R T T V D P P T L E - f T T * P S W C V G H T L Q E D H R W A V Q H D G H P S M R L H * S - AceIII Eco47III Eco57I MscI | | | | GGCATTGATGCTGCTCTGTATCTTGTCAGCGCTCTGATTGATGATGCTACTTCGTTGGGAGTGGCCAAGCGCCTTCAGTGGACCTGGGACAAGGGCGTTG 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 CCGTAACTACGACGAGACATAGAACAGTCGCGAGACTAACTACTACGATGAAGCAACCCTCACCGGTTCGCGGAAGTCACCTGGACCCTGTTCCCGCAAC a H * C C S V S C Q R S D * * C Y F V G S G Q A P S V D L G Q G R C - b G I D A A L Y L V S A L I D D A T S L G V A K R L Q W T W D K G V V - c A L M L L C I L S A L * L M M L L R W E W P S A F S G P G T R A L - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d A N I S S Q I K D A S Q N I I S S R Q S H G L A K L P G P V L A N - e P M S A A R Y R T L A R I S S A V E N P T A L R R * H V Q S L P T - f Q C Q H Q E T D Q * R E S Q H H * K T P L P W A G E T S R P C P R Q - BsaI Bpu10I NheI BsaI | | | | TCGTCGATGGTCTCAACGTCTTAGATCCCTGCCAGTGAGTGCCGTGGTCGAATTAAAAGTTTATGATGGGGCTAAGGCTAGCCCCGATTGAGACCCATTT 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 AGCAGCTACCAGAGTTGCAGAATCTAGGGACGGTCACTCACGGCACCAGCTTAATTTTCAAATACTACCCCGATTCCGATCGGGGCTAACTCTGGGTAAA a R R W S Q R L R S L P V S A V V E L K V Y D G A K A S P D * D P F - b V D G L N V L D P C Q * V P W S N * K F M M G L R L A P I E T H F - c S S M V S T S * I P A S E C R G R I K S L * W G * G * P R L R P I F - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d D D I T E V D * I G A L S H R P R I L L K H H P * P * G R N L G M - e T T S P R L T K S G Q W H T G H D F * F N I I P S L S A G I S V W K - f R R H D * R R L D R G T L A T T S N F T * S P A L A L G S Q S G N - PvuII Eco57I | | TCATATATTGGTGGATTTTGACAGCTGACCCTGAAGGAACCCCTAGAAAATCCCAAAAGGACTGGAG 901 ---------+---------+---------+---------+---------+---------+------- 967 AGTATATAACCACCTAAAACTGTCGACTGGGACTTCCTTGGGGATCTTTTAGGGTTTTCCTGACCTC a S Y I G G F * Q L T L K E P L E N P K R T G - b H I L V D F D S * P * R N P * K I P K G L E - c I Y W W I L T A D P E G T P R K S Q K D W - 901 ---------+---------+---------+---------+---------+---------+------- 967 d K M Y Q H I K V A S G S P V G L F D W F S Q L - e * I N T S K S L Q G Q L F G * F I G F P S S - f E Y I P P N Q C S V R F S G R S F G L L V P - Enzymes that do cut: AatII AceIII BamHI Bce83I BclI BpmI Bpu10I BsaI BsbI BsgI BspEI BspMI BsrBI BssSI BstEII DraIII DrdI EagI EarI EciI Eco47III Eco57I EcoRI EcoRV HgiEII MfeI MscI NarI NheI NotI NruI PinAI PstI PvuII SacI SacII SgrAI SmaI SpeI SspI StuI XbaI Enzymes that do not cut: AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BbsI BcgI BfiI BglI BglII BplI Bpu1102I BsaBI BsaXI BseRI BsiWI BsmI BsmBI BspGI BspLU11I BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DrdII EcoNI FseI FspI HindIII HpaI KpnI MluI NcoI NdeI NgoAIV NsiI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SalI SanDI SapI ScaI SexAI SfiI SgfI SnaBI SphI SrfI Sse8387I Sse8647I SwaI Tth111I VspI XcmI XhoI XmnI