(Linear) MAP of: ./Fgr-C_02_A11_T3.seq check: 4745 from: 1 to: 955 Fgr-C_02_A11_T3 955 6 685 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI BspMI | | | | | | | | | | | | | GGTCACAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGTCAAGACCTGCTACACCTC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCAGTGTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCAGTTCTGGACGATGTGGAG a G H K A G A P R G G G R S R T S G S P G L Q E F G T R S R P A T P P - b V T K L E L P A V A A A L E L V D P P G C R N S A R G Q D L L H L - c S Q S W S S P R W R P L * N * W I P R A A G I R H E V K T C Y T S - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d D C L Q L E G R H R G S * F * H I G R A A P I R C S T L V Q * V E - e T V F S S S G A T A A A R S S T S G G P Q L F E A R P * S R S C R - f * L A P A G R P P P R E L V L P D G P S C S N P V L D L G A V G - BcgI BcgI | BcgI BcgI EarI BglI | | XhoI AceIII | Eco47III | | | | | | | | | CACTGGCTGTGCCGAAGAGGATGCCGCCCGCGAGGCTCACTATACCCTCGAGCGATGTGCCGAACTCGCAAAGGCTGGCGAGCTGAAGAAGCGCTACAAC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTGACCGACACGGCTTCTCCTACGGCGGGCGCTCCGAGTGATATGGGAGCTCGCTACACGGCTTGAGCGTTTCCGACCGCTCGACTTCTTCGCGATGTTG a L A V P K R M P P A R L T I P S S D V P N S Q R L A S * R S A T T - b H W L C R R G C R P R G S L Y P R A M C R T R K G W R A E E A L Q H - c T G C A E E D A A R E A H Y T L E R C A E L A K A G E L K K R Y N - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d V P Q A S S S A A R S A * * V R S R H A S S A F A P S S F F R * L - e W Q S H R L P H R G R P E S Y G R A I H R V R L P Q R A S S A S C - f G S A T G F L I G G A L S V I G E L S T G F E C L S A L Q L L A V V - NgoAIV PinAI Eco57I SgrAI Bce83I | | | | | ATCGCTGCCCTGCCGACTCTGATTCCCCATCCCGAGGCCGCCGGCGTCATCACCGAAGGCCCCAAGGCTACCGGTGGTGAACTCAAGAAGCGTGCTACTG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TAGCGACGGGACGGCTGAGACTAAGGGGTAGGGCTCCGGCGGCCGCAGTAGTGGCTTCCGGGGTTCCGATGGCCACCACTTGAGTTCTTCGCACGATGAC a S L P C R L * F P I P R P P A S S P K A P R L P V V N S R S V L L - b R C P A D S D S P S R G R R R H H R R P Q G Y R W * T Q E A C Y * - c I A A L P T L I P H P E A A G V I T E G P K A T G G E L K K R A T D - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d M A A R G V R I G W G S A A P T M V S P G L A V P P S S L F R A V - e C R Q G A S E S E G D R P R R R * * R L G W P * R H H V * S A H * Q - f D S G Q R S Q N G M G L G G A D D G F A G L S G T T F E L L T S S - ACACTTCAAGAGGAACAAAGTGCTTCACAACTTTCAAGAAGTCAACCGAGCAGTGCGACCTCACGACCGTTTCGGACAAGACCCAGACTGCCACCTGCTA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TGTGAAGTTCTCCTTGTTTCACGAAGTGTTGAAAGTTCTTCAGTTGGCTCGTCACGCTGGAGTGCTGGCAAAGCCTGTTCTGGGTCTGACGGTGGACGAT a T L Q E E Q S A S Q L S R S Q P S S A T S R P F R T R P R L P P A T - b H F K R N K V L H N F Q E V N R A V R P H D R F G Q D P D C H L L - c T S R G T K C F T T F K K S T E Q C D L T T V S D K T Q T A T C Y - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S V E L P V F H K V V K L F D V S C H S R V V T E S L V W V A V Q * - e C K L L F L T S * L K * S T L R A T R G * S R K P C S G S Q W R S - f V S * S S C L A E C S E L L * G L L A V E R G N R V L G L S G G A - BspMI BsgI EcoRV | | | CAGCACCGAGATCAGCACTAGCACATGCCGCAGCGACGTTATCTGCACCACCGACGCTGCCGCCGAGGATATCTGCATGGTCAAGAGGGAAATGGACACT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GTCGTGGCTCTAGTCGTGATCGTGTACGGCGTCGCTGCAATAGACGTGGTGGCTGCGACGGCGGCTCCTATAGACGTACCAGTTCTCCCTTTACCTGTGA a A P R S A L A H A A A T L S A P P T L P P R I S A W S R G K W T L - b Q H R D Q H * H M P Q R R Y L H H R R C R R G Y L H G Q E G N G H C - c S T E I S T S T C R S D V I C T T D A A A E D I C M V K R E M D T - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d L V S I L V L V H R L S T I Q V V S A A A S S I Q M T L L S I S V - e C C R S * C * C M G C R R * R C W R R Q R R P Y R C P * S P F P C - f V A G L D A S A C A A A V N D A G G V S G G L I D A H D L P F H V S - Bpu10I | GCCGGTATCATCATCGCCATTGTCTTTGCCGCCTCAGCCGCTTCCATGCTTGGCTACCTCACCTTCATGTGCTGCCGTGACCGCAAGGAGCAGAAGCGTC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CGGCCATAGTAGTAGCGGTAACAGAAACGGCGGAGTCGGCGAAGGTACGAACCGATGGAGTGGAAGTACACGACGGCACTGGCGTTCCTCGTCTTCGCAG a P V S S S P L S L P P Q P L P C L A T S P S C A A V T A R S R S V - b R Y H H R H C L C R L S R F H A W L P H L H V L P * P Q G A E A S - c A G I I I A I V F A A S A A S M L G Y L T F M C C R D R K E Q K R L - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d A P I M M A M T K A A E A A E M S P * R V K M H Q R S R L S C F R - e Q R Y * * R W Q R Q R R L R K W A Q S G * R * T S G H G C P A S A D - f G T D D D G N D K G G * G S G H K A V E G E H A A T V A L L L L T - BcgI Bpu1102I BsmBI BcgI BssHII | Eco57I | | | | | TCGTCGCCAAGTCCGAAGCTGTTGCTCTCGCCCGTGCCGCCACAAAGAAGCAGCGCGCTGCTCAGCGTCAGCCTCTCATCCGCAACGCTTCAGGCCAGTC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 AGCAGCGGTTCAGGCTTCGACAACGAGAGCGGGCACGGCGGTGTTTCTTCGTCGCGCGACGAGTCGCAGTCGGAGAGTAGGCGTTGCGAAGTCCGGTCAG a S S P S P K L L L S P V P P Q R S S A L L S V S L S S A T L Q A S L - b R R Q V R S C C S R P C R H K E A A R C S A S A S H P Q R F R P V - c V A K S E A V A L A R A A T K K Q R A A Q R Q P L I R N A S G Q S - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d R T A L D S A T A R A R A A V F F C R A A * R * G R M R L A E P W D - e R R W T R L Q Q E R G H R W L S A A R Q E A D A E * G C R K L G T - f E D G L G F S N S E G T G G C L L L A S S L T L R E D A V S * A L - BsrBI XcmI EciI | BsrDI PvuII PstI | | | | | | TGCCCCTGGTGCTCCTGCTGGCAATCCCTTCCAGGACCGAATCTAGGCGGAGCGGTCCCGTCGGGGGGGAGCAATGGGAACAAACAGCTGCAGCGAGTAT 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 ACGGGGACCACGAGGACGACCGTTAGGGAAGGTCCTGGCTTAGATCCGCCTCGCCAGGGCAGCCCCCCCTCGTTACCCTTGTTTGTCGACGTCGCTCATA a P L V L L L A I P S R T E S R R S G P V G G E Q W E Q T A A A S I - b C P W C S C W Q S L P G P N L G G A V P S G G S N G N K Q L Q R V S - c A P G A P A G N P F Q D R I * A E R S R R G G A M G T N S C S E Y - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d A G P A G A P L G K W S R I * A S R D R R P P A I P V F L Q L S Y - e Q G Q H E Q Q C D R G P G F R P P A T G D P P L L P F L C S C R T - f R G R T S R S A I G E L V S D L R L P G T P P S C H S C V A A A L I - AceIII EarI| SacI SapI| Eco47III | || | CCCAGGAGGGTCCATACTCATACTGAGCTCTTCTGTGTACGGCATGGAGCTGGCTTGNTTCGAGCGCTTACTCTATTCTTTTATAATGCCTGCCTGATTA 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 GGGTCCTCCCAGGTATGAGTATGACTCGAGAAGACACATGCCGTACCTCGACCGAACNAAGCTCGCGAATGAGATAAGAAAATATTACGGACGGACTAAT a P G G S I L I L S S S V Y G M E L A ? F E R L L Y S F I M P A * L - b Q E G P Y S Y * A L L C T A W S W L ? S S A Y S I L L * C L P D Y - c P R R V H T H T E L F C V R H G A G L ? R A L T L F F Y N A C L I T - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d G L L T W V * V S S K Q T R C P A P K ? R A S V R N K * L A Q R I - e D W S P G Y E Y Q A R R H V A H L Q S ? E L A * E I R K Y H R G S * - f G P P D M S M S L E E T Y P M S S A Q ? S R K S * E K I I G A Q N - XmnI NcoI | | CCACGCAAGGAAAGACTTCCAGGCTTGGAAATTCCTAAAACCATGGATACGTCTT 901 ---------+---------+---------+---------+---------+----- 955 GGTGCGTTCCTTTCTGAAGGTCCGAACCTTTAAGGATTTTGGTACCTATGCAGAA a P R K E R L P G L E I P K T M D T S - b H A R K D F Q A W K F L K P W I R L - c T Q G K T S R L G N S * N H G Y V - 901 ---------+---------+---------+---------+---------+----- 955 d V V C P F V E L S P F E * F W P Y T K - e W A L F S K W A Q F N R F G H I R R - f G R L S L S G P K S I G L V M S V D - Enzymes that do cut: AceIII BamHI Bce83I BcgI BglI BpmI Bpu10I Bpu1102I BsgI BsmBI BspMI BsrBI BsrDI BssHII BssSI EagI EarI EciI Eco47III Eco57I EcoRI EcoRV NcoI NgoAIV NotI PinAI PstI PvuII SacI SacII SapI SgrAI SmaI SpeI XbaI XcmI XhoI XmnI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BbsI BclI BfiI BglII BplI BsaI BsaBI BsaXI BsbI BseRI BsiWI BsmI BspEI BspGI BspLU11I BsrGI Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EcoNI FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NdeI NheI NruI NsiI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SalI SanDI ScaI SexAI SfiI SgfI SnaBI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI