(Linear) MAP of: ./Fgr-C_02_A12_T3.seq check: 7117 from: 1 to: 958 Fgr-C_02_A12_T3 958 24 637 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BstXI EagI | | EcoRI SacI SacII| NotI | | SpeI BamHI SmaI PstI | BssSI KpnI | || | | | | | | | | | | GGGGCAAAAAGCTGGGAGCTCCACCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGTACCAATGTTTCGTCT 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCCGTTTTTCGACCCTCGAGGTGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCATGGTTACAAAGCAGA a G A K S W E L H R G G G R S R T S G S P G L Q E F G T R Y Q C F V S - b G Q K A G S S T A V A A A L E L V D P P G C R N S A R G T N V S S - c G K K L G A P P R W R P L * N * W I P R A A G I R H E V P M F R L - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P L F S P A G G R H R G S * F * H I G R A A P I R C S T G I N R R - e P C F A P L E V A T A A A R S S T S G G P Q L F E A R P V L T E D - f A F L Q S S W R P P P R E L V L P D G P S C S N P V L Y W H K T - BfiI SphI BsmBI Tth111I|BglII BsmBI | | || | | | CCACACATTTATTTTGAGAAGGATCATTTTTGCTAACCCTTGACTTTTACAGACCCAGTCAGATCTCATTGGAATCCCGGTCAACAGACCCGGCATGCGT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GGTGTGTAAATAAAACTCTTCCTAGTAAAAACGATTGGGAACTGAAAATGTCTGGGTCAGTCTAGAGTAACCTTAGGGCCAGTTGTCTGGGCCGTACGCA a T H L F * E G S F L L T L D F Y R P S Q I S L E S R S T D P A C V - b P H I Y F E K D H F C * P L T F T D P V R S H W N P G Q Q T R H A * - c H T F I L R R I I F A N P * L L Q T Q S D L I G I P V N R P G M R - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d W V N I K L L I M K A L G Q S K C V W D S R M P I G T L L G P M R - e G C M * K S F S * K Q * G K V K V S G T L D * Q F G P * C V R C A - f E V C K N Q S P D N K S V R S K * L G L * I E N S D R D V S G A H T - ApaBI DraIII| EarI BfiI || BsrDI SapI BsbI | || | | | GAGACGACAGCACTGGGTGCGGCCATTGCAGCGGGTTTCGCCGTTGGTATCTGGAAGAGCTTTGATGACTTGAAGGAGGTCAACACCCAAGGCCGTACCA 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CTCTGCTGTCGTGACCCACGCCGGTAACGTCGCCCAAAGCGGCAACCATAGACCTTCTCGAAACTACTGAACTTCCTCCAGTTGTGGGTTCCGGCATGGT a R R Q H W V R P L Q R V S P L V S G R A L M T * R R S T P K A V P - b D D S T G C G H C S G F R R W Y L E E L * * L E G G Q H P R P Y H - c E T T A L G A A I A A G F A V G I W K S F D D L K E V N T Q G R T I - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S V V A S P A A M A A P K A T P I Q F L K S S K F S T L V W P R V - e H S S L V P H P W Q L P N R R Q Y R S S S Q H S S P P * C G L G Y W - f L R C C Q T R G N C R T E G N T D P L A K I V Q L L D V G L A T G - BseRI BseRI | PflMI | | | TCTTCAAGCCGCAGATTGCCGAGGAGGAGGCGACGAAGCGGTTTGGACGTTGGACCAAGGCCGTCGAGATGTCCAAGGGCTGGGCCAACGAGTGAATGAG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 AGAAGTTCGGCGTCTAACGGCTCCTCCTCCGCTGCTTCGCCAAACCTGCAACCTGGTTCCGGCAGCTCTACAGGTTCCCGACCCGGTTGCTCACTTACTC a S S S R R L P R R R R R S G L D V G P R P S R C P R A G P T S E * E - b L Q A A D C R G G G D E A V W T L D Q G R R D V Q G L G Q R V N E - c F K P Q I A E E E A T K R F G R W T K A V E M S K G W A N E * M R - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d M K L G C I A S S S A V F R N P R Q V L A T S I D L P Q A L S H I L - e R * A A S Q R P P P S S A T Q V N S W P R R S T W P S P W R T F S - f D E L R L N G L L L R R L P K S T P G L G D L H G L A P G V L S H - ScaI | AGACTTGATTGGTTTGATTGCTTGGGTTGTGTGTGTGTGTGTCTATGTACCAGTACTTATTTCAATACCTAGTTCTAGTTTAGCTTAAAAAAAAAAAAAA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 TCTGAACTAACCAAACTAACGAACCCAACACACACACACACAGATACATGGTCATGAATAAAGTTATGGATCAAGATCAAATCGAATTTTTTTTTTTTTT a T * L V * L L G L C V C V S M Y Q Y L F Q Y L V L V * L K K K K K - b R L D W F D C L G C V C V C L C T S T Y F N T * F * F S L K K K K K - c D L I G L I A W V V C V C V Y V P V L I S I P S S S L A * K K K K - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d S K I P K I A Q T T H T H T * T G T S I E I G L E L K A * F F F F - e L S S Q N S Q K P Q T H T H R H V L V * K L V * N * N L K F F F F - f S V Q N T Q N S P N H T H T D I Y W Y K N * Y R T R T * S L F F F F - XhoI ApaI KpnI BfiI | | | | AAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TTTTTGAGCTCCCCCCCGGGCCATGGGTTAAGCGGGATATCACTCAGCATAATGTTAAGTGACCGGCAGCAAAATGTTGCAGCACTGACCCTTTTGGGAC a K T R G G A R Y P I R P I V S R I T I H W P S F Y N V V T G K T L - b K L E G G P G T Q F A L * * V V L Q F T G R R F T T S * L G K P W - c K N S R G G P V P N S P Y S E S Y Y N S L A V V L Q R R D W E N P G - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d F F E L P P G T G L E G * L S D Y * L E S A T T K C R R S Q S F G - e F F S S P P G P V W N A R Y H T T N C N V P R R K V V D H S P F G Q - f F V R P P A R Y G I R G I T L R I V I * Q G D N * L T T V P F V R - PvuII EarI PvuI FspI | | | | GCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCCACAGTTGCGCAGC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CGCAATGGGTTGAATTAGCGGAACGTCGTGTAGGGGGAAAGCGGTCGACCGCATTATCGCTTCTCCGGGCGTGGCTAGCGGGAAGGGTGTCAACGCGTCG a A L P N L I A L Q H I P L S P A G V I A K R P A P I A L P T V A Q P - b R Y P T * S P C S T S P F R Q L A * * R R G P H R S P F P Q L R S - c V T Q L N R L A A H P P F A S W R N S E E A R T D R P S H S C A A - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d P T V W S L R R A A C G G K A L Q R L L S S A R V S R G E W L Q A A - e R * G V * D G Q L V D G K R W S A Y Y R L P G C R D G K G C N R L - f A N G L K I A K C C M G R E G A P T I A F L G A G I A R G V T A C - BglI SspI AceIII | | | CTGAATGGCGAATGGCAAATTGTAAGCGTTAATATTTTGTTAAAATTCGCGTTAAATTTTTGTTAAATCAGCTCATTTTTTTACCAATAGGCCGAAATCG 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 GACTTACCGCTTACCGTTTAACATTCGCAATTATAAAACAATTTTAAGCGCAATTTAAAAACAATTTAGTCGAGTAAAAAAATGGTTATCCGGCTTTAGC a E W R M A N C K R * Y F V K I R V K F L L N Q L I F L P I G R N R - b L N G E W Q I V S V N I L L K F A L N F C * I S S F F Y Q * A E I G - c * M A N G K L * A L I F C * N S R * I F V K S A H F F T N R P K S - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d Q I A F P L N Y A N I N Q * F E R * I K T L D A * K K V L L G F D - e R F P S H C I T L T L I K N F N A N F K Q * I L E N K * W Y A S I - f G S H R I A F Q L R * Y K T L I R T L N K N F * S M K K G I P R F R - BspGI AhdI AhdI | | | GCAAAATCCCTTATAAATCAAAAGAATAGACCGAGATAGGGTTGATTGTTGGTCCAGTTTGGACAAGAAGTCACTATTAAAGACGTGGACTTCACGTCAA 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 CGTTTTAGGGAATATTTAGTTTTCTTATCTGGCTCTATCCCAACTAACAACCAGGTCAAACCTGTTCTTCAGTGATAATTTCTGCACCTGAAGTGCAGTT a Q N P L * I K R I D R D R V D C W S S L D K K S L L K T W T S R Q - b K I P Y K S K E * T E I G L I V G P V W T R S H Y * R R G L H V K - c A K S L I N Q K N R P R * G * L L V Q F G Q E V T I K D V D F T S R - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d A F D R I F * F F L G L Y P Q N N T W N P C S T V I L S T S K V D - e P L I G * L D F S Y V S I P N I T P G T Q V L L * * * L R P S * T L - f C F G K Y I L L I S R S L T S Q Q D L K S L F D S N F V H V E R * - GGGCGAAAAACGTCTTTAGGGCGATGGCCCCTACGTGAACACTCCCTAATCAGGTTTT 901 ---------+---------+---------+---------+---------+-------- 958 CCCGCTTTTTGCAGAAATCCCGCTACCGGGGATGCACTTGTGAGGGATTAGTCCAAAA a G R K T S L G R W P L R E H S L I R F - b G E K R L * G D G P Y V N T P * S G F - c A K N V F R A M A P T * T L P N Q V - 901 ---------+---------+---------+---------+---------+-------- 958 d L A F F T K L A I A G V H V S G L * T K - e P S F R R * P S P G * T F V G * D P K - f P R F V D K P R H G R R S C E R I L N - Enzymes that do cut: AceIII AhdI ApaI ApaBI BamHI BfiI BglI BglII BsbI BseRI BsmBI BspGI BsrBI BsrDI BssSI BstXI DraIII EagI EarI EcoRI FspI KpnI NotI PflMI PstI PvuI PvuII SacI SacII SapI ScaI SmaI SpeI SphI SspI Tth111I XbaI XhoI Enzymes that do not cut: AatII AflII AlwNI ApaLI AscI AvrII BbsI Bce83I BcgI BclI BplI BpmI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsgI BsiWI BsmI BspEI BspLU11I BspMI BsrGI BssHII Bst1107I BstEII Bsu36I ClaI DraI DrdI DrdII EciI Eco47III Eco57I EcoNI EcoRV FseI HgiEII HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PinAI PmeI PmlI PshAI Psp1406I RcaI RsrII SalI SanDI SexAI SfiI SgfI SgrAI SnaBI SrfI Sse8387I Sse8647I StuI SwaI VspI XcmI XmnI