(Linear) MAP of: ./Fgr-C_02_A14_T3.seq check: 2721 from: 1 to: 942 Fgr-C_02_A14_T3 942 10 676 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI Pfl1108I | | | | | | | | | | | | | GGGTAAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGACCAATCATGCTCGTAGCGC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCATTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCTGGTTAGTACGAGCATCGCG a G * K A G A P R G G G R S R L V D P P G C R N S A R G P I M L V A H - b G K K L E L P A V A A A L D * W I P R A A G I R H E D Q S C S * R - c V K S W S S P R W R P L * T S G S P G L Q E F G T R T N H A R S A - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P L F S S S G A T A A A R S * H I G R A A P I R C S S W D H E Y R - e Y F A P A G R P P P R E L S T S G G P Q L F E A R P G I M S T A - f T F L Q L E G R H R G S * V L P D G P S C S N P V L V L * A R L A - Bce83I AceIII BsaXI NruI AatII | | | | | ATAACCAAGTTCACGACAGCTCAAGCAACATGGACCAACAGGAACCGCCAGAGTTTATCCTCGATGTATTTACTGACCCGCGCTCCGTTCGCGACGTCGT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TATTGGTTCAAGTGCTGTCGAGTTCGTTGTACCTGGTTGTCCTTGGCGGTCTCAAATAGGAGCTACATAAATGACTGGGCGCGAGGCAAGCGCTGCAGCA a N Q V H D S S S N M D Q Q E P P E F I L D V F T D P R S V R D V V - b I T K F T T A Q A T W T N R N R Q S L S S M Y L L T R A P F A T S L - c * P S S R Q L K Q H G P T G T A R V Y P R C I Y * P A L R S R R R - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d M V L N V V A * A V H V L L F R W L K D E I Y K S V R A G N A V D - e C L W T * S L E L L M S W C S G G S N I R S T N V S G R E T R S T T - f Y G L E R C S L C C P G V P V A L T * G R H I * Q G A S R E R R R - Bst1107I BssSI BspGI EarI SalI | | | | | TAAAGGTATACTTCACACGATATTCTTTCACAGATTCTTTCCTTCTCTAGTTCCTCAAACTCGTGAAGTTCTGGACCTCACTCTTCCCTATGTCGACGAC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 ATTTCCATATGAAGTGTGCTATAAGAAAGTGTCTAAGAAAGGAAGAGATCAAGGAGTTTGAGCACTTCAAGACCTGGAGTGAGAAGGGATACAGCTGCTG a K G I L H T I F F H R F F P S L V P Q T R E V L D L T L P Y V D D - b K V Y F T R Y S F T D S F L L * F L K L V K F W T S L F P M S T T - c * R Y T S H D I L S Q I L S F S S S S N S * S S G P H S S L C R R R - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d N F T Y K V R Y E K V S E K R R * N R L S T F N Q V E S K G I D V V - e L P I S * V I N K * L N K G E R T G * V R S T R S R V R G * T S S - f * L Y V E C S I R E C I R E K E L E E F E H L E P G * E E R H R R - SacI XhoI| || GATGAGCTCGAGACTATGATAGAGCAGCGCGTCGCGGCCTTTGAGCGACAGATAGACACCCAGCGCACATCCAGCGGAACAAATAATGCTTCCGGTGGAA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CTACTCGAGCTCTGATACTATCTCGTCGCGCAGCGCCGGAAACTCGCTGTCTATCTGTGGGTCGCGTGTAGGTCGCCTTGTTTATTACGAAGGCCACCTT a D E L E T M I E Q R V A A F E R Q I D T Q R T S S G T N N A S G G S - b M S S R L * * S S A S R P L S D R * T P S A H P A E Q I M L P V E - c * A R D Y D R A A R R G L * A T D R H P A H I Q R N K * C F R W K - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d I L E L S H Y L L A D R G K L S L Y V G L A C G A S C I I S G T S - e S S S S V I I S C R T A A K S R C I S V W R V D L P V F L A E P P - f R H A R S * S L A A R R P R Q A V S L C G A C M W R F L Y H K R H F - BsgI NgoAIV | PvuII SgrAI | StuI BssSI EarI | | | | | | GCGCGACCGGGGGACGCGGGCAGCTGGTTGTGCAGTTCTTCGAGAAGCGCCGGCGCAAGGCCTGGTTGTCTCGTGGCGATGAAGAGGTCTGCTGGGAATG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CGCGCTGGCCCCCTGCGCCCGTCGACCAACACGTCAAGAAGCTCTTCGCGGCCGCGTTCCGGACCAACAGAGCACCGCTACTTCTCCAGACGACCCTTAC a A T G G R G Q L V V Q F F E K R R R K A W L S R G D E E V C W E C - b A R P G D A G S W L C S S S R S A G A R P G C L V A M K R S A G N V - c R D R G T R A A G C A V L R E A P A Q G L V V S W R * R G L L G M - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d A R G P S A P L Q N H L E E L L A P A L G P Q R T A I F L D A P F - e L A V P P R P C S T T C N K S F R R R L A Q N D R P S S S T Q Q S H - f R S R P V R A A P Q A T R R S A G A C P R T T E H R H L P R S P I - BsrDI | TTGGACGATCAAAGTAACCGTCGCCGAGCCCAGAACAGAAAGCGAACGAGCTAAAGTCCGACGCGCAATGGAACAAACCCTTCTAACGACAGCGATGAAG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 AACCTGCTAGTTTCATTGGCAGCGGCTCGGGTCTTGTCTTTCGCTTGCTCGATTTCAGGCTGCGCGTTACCTTGTTTGGGAAGATTGCTGTCGCTACTTC a W T I K V T V A E P R T E S E R A K V R R A M E Q T L L T T A M K - b G R S K * P S P S P E Q K A N E L K S D A Q W N K P F * R Q R * R - c L D D Q S N R R R A Q N R K R T S * S P T R N G T N P S N D S D E D - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d T P R D F Y G D G L G S C F A F S S F D S A C H F L G K * R C R H L - e Q V I L T V T A S G L V S L S R A L T R R A I S C V R R V V A I F - f N S S * L L R R R A W F L F R V L * L G V R L P V F G E L S L S S - XmnI | ATTGTTACGTTCGCAAACACCCACAAGGATCATATACCACCTATCACCACCCAAGGAACGAACCCGTTCCCATACAAGATTAACCTCGACCAGAAAGAAG 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 TAACAATGCAAGCGTTTGTGGGTGTTCCTAGTATATGGTGGATAGTGGTGGGTTCCTTGCTTGGGCAAGGGTATGTTCTAATTGGAGCTGGTCTTTCTTC a I V T F A N T H K D H I P P I T T Q G T N P F P Y K I N L D Q K E A - b L L R S Q T P T R I I Y H L S P P K E R T R S H T R L T S T R K K - c C Y V R K H P Q G S Y T T Y H H P R N E P V P I Q D * P R P E R S - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d N N R E C V G V L I M Y W R D G G L S R V R E W V L N V E V L F F - e I T V N A F V W L S * I G G I V V W P V F G N G Y L I L R S W F S - f S Q * T R L C G C P D Y V V * * W G L F S G T G M C S * G R G S L L - Eco57I EcoRI | | CAACAGGCTGGGGCACACGGATGCGAATATACTGAAGAACCTATTGAACCTGNAATTGGACTGAGAATTGACTAGGGTGCTATCTGATATTGAATTCAAC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 GTTGTCCGACCCCGTGTGCCTACGCTTATATGACTTCTTGGATAACTTGGACNTTAACCTGACTCTTAACTGATCCCACGATAGACTATAACTTAAGTTG a T G W G T R M R I Y * R T Y * T ? N W T E N * L G C Y L I L N S T - b Q Q A G A H G C E Y T E E P I E P ? I G L R I D * G A I * Y * I Q Q - c N R L G H T D A N I L K N L L N L ? L D * E L T R V L S D I E F N - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d C C A P A C P H S Y V S S G I S G ? I P S L I S * P A I Q Y Q I * - e A V P Q P V R I R I Y Q L V * Q V Q ? Q V S F Q S P H * R I N F E V - f L L S P C V S A F I S F F R N F R ? N S Q S N V L T S D S I S N L - Bce83I | AGGGATAGGTGCCTGAGTCTTGTCGTATTGAACGATGGATCTCGACCATTGAGTATGGACCACGGATAATAGACTTGAGCGTTTCCCGAGTTTGGATTAG 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 TCCCTATCCACGGACTCAGAACAGCATAACTTGCTACCTAGAGCTGGTAACTCATACCTGGTGCCTATTATCTGAACTCGCAAAGGGCTCAAACCTAATC a G I G A * V L S Y * T M D L D H * V W T T D N R L E R F P S L D * - b G * V P E S C R I E R W I S T I E Y G P R I I D L S V S R V W I S - c R D R C L S L V V L N D G S R P L S M D H G * * T * A F P E F G L A - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d C P Y T G S D Q R I S R H I E V M S Y P G R I I S K L T E R T Q I L - e P I P A Q T K D Y Q V I S R S W Q T H V V S L L S S R K G L K S * - f L S L H R L R T T N F S P D R G N L I S W P Y Y V Q A N G S N P N - DraI | CGTTAGACTTTGTGCTATTCGTACCATTTTTAAAAAAAAAAA 901 ---------+---------+---------+---------+-- 942 GCAATCTGAAACACGATAAGCATGGTAAAAATTTTTTTTTTT a R * T L C Y S Y H F * K K K - b V R L C A I R T I F K K K - c L D F V L F V P F L K K K - 901 ---------+---------+---------+---------+-- 942 d T L S Q A I R V M K L F F F - e R * V K H * E Y W K * F F F - f A N S K T S N T G N K F F F - Enzymes that do cut: AatII AceIII BamHI Bce83I BpmI BsaXI BsgI BspGI BsrBI BsrDI BssSI Bst1107I DraI EagI EarI Eco57I EcoRI NgoAIV NotI NruI Pfl1108I PstI PvuII SacI SacII SalI SgrAI SmaI SpeI StuI XbaI XhoI XmnI Enzymes that do not cut: AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BbsI BcgI BclI BfiI BglI BglII BplI Bpu10I Bpu1102I BsaI BsaBI BsbI BseRI BsiWI BsmI BsmBI BspEI BspLU11I BspMI BsrGI BssHII BstEII BstXI Bsu36I ClaI DraIII DrdI DrdII EciI Eco47III EcoNI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NheI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SanDI SapI ScaI SexAI SfiI SgfI SnaBI SphI SrfI Sse8387I Sse8647I SspI SwaI Tth111I VspI XcmI