(Linear) MAP of: ./Fgr-C_02_A15_T3.seq check: 6547 from: 1 to: 955 Fgr-C_02_A15_T3 955 22 712 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI BseRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI BsbI | | | | | | | | | | | | | | | GGGTCATAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGAGCAAACAACACTCGCAA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCAGTATTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCTCGTTTGTTGTGAGCGTT a G S * S W S S P R W R P L * N * W I P R A A G I R H E E Q T T L A T - b G H K A G A P R G G G R S R T S G S P G L Q E F G T R S K Q H S Q - c V I K L E L P A V A A A L E L V D P P G C R N S A R G A N N T R N - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d T M F S S S G A T A A A R S S T S G G P Q L F E A R P A F L V R L - e P * L A P A G R P P P R E L V L P D G P S C S N P V L L L C C E C - f D Y L Q L E G R H R G S * F * H I G R A A P I R C S S C V V S A - Eco57I XmnI NspV | BsbI | | | | CAATCACCACTTCAAAACTCTACATACTCTCACACTCAACTCTTTCTCAAACACCATTAACCTGAAGCACTTCACTTTCGAACCCACCACCAACACAATC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTTAGTGGTGAAGTTTTGAGATGTATGAGAGTGTGAGTTGAGAAAGAGTTTGTGGTAATTGGACTTCGTGAAGTGAAAGCTTGGGTGGTGGTTGTGTTAG a I T T S K L Y I L S H S T L S Q T P L T * S T S L S N P P P T Q S - b Q S P L Q N S T Y S H T Q L F L K H H * P E A L H F R T H H Q H N Q - c N H H F K T L H T L T L N S F S N T I N L K H F T F E P T T N T I - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d L * W K L V R C V R V S L E K E F V M L R F C K V K S G V V L V I - e C D G S * F E V Y E * V * S K R L C W * G S A S * K R V W W W C L - f V I V V E F S * M S E C E V R E * V G N V Q L V E S E F G G G V C D - BseRI EarI BsmBI | | | AACAAAATGGCTTTCTTCCCTCGCAACTTCTACAACTCCGACGCTTCCTTCACTCCTCTCTTCCGTCTCCTTGACGACTTTGACAGCTACTCTCGCCAGG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TTGTTTTACCGAAAGAAGGGAGCGTTGAAGATGTTGAGGCTGCGAAGGAAGTGAGGAGAGAAGGCAGAGGAACTGCTGAAACTGTCGATGAGAGCGGTCC a T K W L S S L A T S T T P T L P S L L S S V S L T T L T A T L A R - b Q N G F L P S Q L L Q L R R F L H S S L P S P * R L * Q L L S P G - c N K M A F F P R N F Y N S D A S F T P L F R L L D D F D S Y S R Q G - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d L L I A K K G R L K * L E S A E K V G R K R R R S S K S L * E R W - e * C F P K R G E C S R C S R R K R * E E R G D G Q R S Q C S S E G P - f V F H S E E R A V E V V G V S G E S R E E T E K V V K V A V R A L - Bpu10I DrdII BglI | AlwNI Pfl1108I BpmI | | | | | | GAACCAACGGAAATGGTGGCGCTCGCCGCAGCGGCCTCAGCCACTGGCAGCCCAAGTTCGATGTCCGCGAGACTGGAGAATCCTACGAGCTTCACGGCGA 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CTTGGTTGCCTTTACCACCGCGAGCGGCGTCGCCGGAGTCGGTGACCGTCGGGTTCAAGCTACAGGCGCTCTGACCTCTTAGGATGCTCGAAGTGCCGCT a E P T E M V A L A A A A S A T G S P S S M S A R L E N P T S F T A S - b N Q R K W W R S P Q R P Q P L A A Q V R C P R D W R I L R A S R R - c T N G N G G A R R S G L S H W Q P K F D V R E T G E S Y E L H G E - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d P V L P F P P A R R L P R L W Q C G L N S T R S V P S D * S S * P S - e F W R F H H R E G C R G * G S A A W T R H G R S Q L I R R A E R R - f S G V S I T A S A A A A E A V P L G L E I D A L S S F G V L K V A - SacI SacII NgoAIV | | | GCTCCCCGGTATGAACAAGTCTGATGTTCACATCGAGTTCACTGAACCTCAGACCATGCTCATCCGCGGCAAGACCGAGCGCACCTACACTGCCGGCACC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CGAGGGGCCATACTTGTTCAGACTACAAGTGTAGCTCAAGTGACTTGGAGTCTGGTACGAGTAGGCGCCGTTCTGGCTCGCGTGGATGTGACGGCCGTGG a S P V * T S L M F T S S S L N L R P C S S A A R P S A P T L P A P - b A P R Y E Q V * C S H R V H * T S D H A H P R Q D R A H L H C R H P - c L P G M N K S D V H I E F T E P Q T M L I R G K T E R T Y T A G T - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d S G P I F L D S T * M S N V S G * V M S M R P L V S R V * V A P V - e A G R Y S C T Q H E C R T * Q V E S W A * G R C S R A C R C Q R C - f L E G T H V L R I N V D L E S F R L G H E D A A L G L A G V S G A G - BsaI NarI BsaXI BbsI | | | | CCTCCCGCTGGTCTCGTCGAGGGCACCGAAGCCCGAGGCGCCATCACTGATGACAGCGAGGAACACAGCAACTCCCACCACGCCACCGTCGAAGACGAGG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 GGAGGGCGACCAGAGCAGCTCCCGTGGCTTCGGGCTCCGCGGTAGTGACTACTGTCGCTCCTTGTGTCGTTGAGGGTGGTGCGGTGGCAGCTTCTGCTCC a L P L V S S R A P K P E A P S L M T A R N T A T P T T P P S K T R - b S R W S R R G H R S P R R H H * * Q R G T Q Q L P P R H R R R R G - c P P A G L V E G T E A R G A I T D D S E E H S N S H H A T V E D E E - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d G G A P R T S P V S A R P A M V S S L S S C L L E W W A V T S S S - e G E R Q D R R P C R L G L R W * Q H C R P V C C S G G R W R R L R P - f R G S T E D L A G F G S A G D S I V A L F V A V G V V G G D F V L - BssSI PflMI BseRI | BstEII SalI ScaI| | | | | || AGCAAGCCAAGGCTCACGAGGCCAGCACCGAGGTCACCCACCATGAACAGCCCCAGGAAGTTGAGAAGAAGCCCGTCGACCAGTCCAAGTACTGGCTCAC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 TCGTTCGGTTCCGAGTGCTCCGGTCGTGGCTCCAGTGGGTGGTACTTGTCGGGGTCCTTCAACTCTTCTTCGGGCAGCTGGTCAGGTTCATGACCGAGTG a S K P R L T R P A P R S P T M N S P R K L R R S P S T S P S T G S P - b A S Q G S R G Q H R G H P P * T A P G S * E E A R R P V Q V L A H - c Q A K A H E A S T E V T H H E Q P Q E V E K K P V D Q S K Y W L T - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d S C A L A * S A L V S T V W W S C G W S T S F F G T S W D L Y Q S V - e A L W P E R P W C R P * G G H V A G P L Q S S A R R G T W T S A * - f L L G L S V L G A G L D G V M F L G L F N L L L G D V L G L V P E - BclI EcoRI BssSI BsbI | BsmBI | | | | | CGAGCGCAGCTTCGGCGAATTCTCTCGCAGCTTCAACTTCCCCACTCGTGTTGATCAGGAAAACGTCTCTGCTAAATTCACGATGGTATCTTGAGCATCG 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 GCTCGCGTCGAAGCCGCTTAAGAGAGCGTCGAAGTTGAAGGGGTGAGCACAACTAGTCCTTTTGCAGAGACGATTTAAGTGCTACCATAGAACTCGTAGC a S A A S A N S L A A S T S P L V L I R K T S L L N S R W Y L E H R - b R A Q L R R I L S Q L Q L P H S C * S G K R L C * I H D G I L S I V - c E R S F G E F S R S F N F P T R V D Q E N V S A K F T M V S * A S - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d S R L K P S N E R L K L K G V R T S * S F T E A L N V I T D Q A D - e R A C S R R I R E C S * S G W E H Q D P F R R Q * I * S P I K L M - f G L A A E A F E R A A E V E G S T N I L F V D R S F E R H Y R S C R - Bce83I BcgI BcgI | BssSI Psp1406I | EarI | | | | | | TTGTCCCCAAGCCAAGAGCACGAGTCTCGACGCATCAACGTTGAGTAAACTCACCACACAGNACTCACACATTACGGATCTGGATAAAAGCACTCTTCGG 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 AACAGGGGTTCGGTTCTCGTGCTCAGAGCTGCGTAGTTGCAACTCATTTGAGTGGTGTGTCNTGAGTGTGTAATGCCTAGACCTATTTTCGTGAGAAGCC a C P Q A K S T S L D A S T L S K L T T Q ? S H I T D L D K S T L R - b V P K P R A R V S T H Q R * V N S P H ? T H T L R I W I K A L F G - c L S P S Q E H E S R R I N V E * T H H T ? L T H Y G S G * K H S S A - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d N D G L W S C S D R R M L T S Y V * W V ? S V C * P D P Y F C E E - e T T G L G L A R T E V C * R Q T F E G C L V * V N R I Q I F A S K P - f Q G W A L L V L R S A D V N L L S V V C ? E C M V S R S L L V R R - BclI PstI | | CGGGTATTCCTTAATCGGGCGCACAATGATCAGTTTATGACTTTAGCTGCAGGAA 901 ---------+---------+---------+---------+---------+----- 955 GCCCATAAGGAATTAGCCCGCGTGTTACTAGTCAAATACTGAAATCGACGTCCTT a R V F L N R A H N D Q F M T L A A G - b G Y S L I G R T M I S L * L * L Q E - c G I P * S G A Q * S V Y D F S C R - 901 ---------+---------+---------+---------+---------+----- 955 d A P I G * D P A C H D T * S K L Q L F - e P Y E K I P R V I I L K H S * S C S - f R T N R L R A C L S * N I V K A A P - Enzymes that do cut: AlwNI BamHI BbsI Bce83I BcgI BclI BglI BpmI Bpu10I BsaI BsaXI BsbI BseRI BsmBI BsrBI BssSI BstEII DrdII EagI EarI Eco57I EcoRI NarI NgoAIV NotI NspV Pfl1108I PflMI Psp1406I PstI SacI SacII SalI ScaI SmaI SpeI XbaI XmnI Enzymes that do not cut: AatII AceIII AflII AhdI ApaI ApaBI ApaLI AscI AvrII BfiI BglII BplI Bpu1102I BsaBI BsgI BsiWI BsmI BspEI BspGI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DraIII DrdI EciI Eco47III EcoNI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NcoI NdeI NheI NruI NsiI PacI PinAI PmeI PmlI PshAI PvuI PvuII RcaI RsrII SanDI SapI SexAI SfiI SgfI SgrAI SnaBI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XcmI XhoI