(Linear) MAP of: ./Fgr-C_02_A16_T3.seq check: 7252 from: 1 to: 974 Fgr-C_02_A16_T3 974 10 673 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI | | | | | | | | | | | | NGTTCACAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGGCGAAGTCCGGTCTGGCCG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 NCAAGTGTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCCGCTTCAGGCCAGACCGGC a ? S Q A G A P R G G G R S R T S G S P G L Q E F G T R A K S G L A V - b V H K L E L P A V A A A L E L V D P P G C R N S A R G R S P V W P - c F T S W S S P R W R P L * N * W I P R A A G I R H E G E V R S G R - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d E C A P A G R P P P R E L V L P D G P S C S N P V L A F D P R A - e N V L Q L E G R H R G S * F * H I G R A A P I R C S P S T R D P R - f T * L S S S G A T A A A R S S T S G G P Q L F E A R P R L G T Q G - Bpu10I BstEII | EcoNI BsbI DrdII | BcgI| NruI | | | | || | TTGGCCTCAACAAGGGCCACAAAACTACCCCCCGTGTTGTCAAGCCCCGTGTTTCCCGAACCAAGGGTCACCTGAGCAAGCGCACCGCTTTCGTTCGCGA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 AACCGGAGTTGTTCCCGGTGTTTTGATGGGGGGCACAACAGTTCGGGGCACAAAGGGCTTGGTTCCCAGTGGACTCGTTCGCGTGGCGAAAGCAAGCGCT a G L N K G H K T T P R V V K P R V S R T K G H L S K R T A F V R E - b L A S T R A T K L P P V L S S P V F P E P R V T * A S A P L S F A R - c W P Q Q G P Q N Y P P C C Q A P C F P N Q G S P E Q A H R F R S R - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d T P R L L P W L V V G R T T L G R T E R V L P * R L L R V A K T R S - e Q G * C P G C F * G G H Q * A G H K G F W P D G S C A C R K R E R - f N A E V L A V F S G G T N D L G T N G S G L T V Q A L A G S E N A - BcgI Pfl1108I EarI | | | GGTTGTCAAGGAGGTTGCTGGCCTCGCCCCCTACGAGCGCCGAGTCATCGAGTTGCTCCGCAACTCCAAGGACAAGCGTGCCCGTAAGCTCGCTAAGAAG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CCAACAGTTCCTCCAACGACCGGAGCGGGGGATGCTCGCGGCTCAGTAGCTCAACGAGGCGTTGAGGTTCCTGTTCGCACGGGCATTCGAGCGATTCTTC a V V K E V A G L A P Y E R R V I E L L R N S K D K R A R K L A K K - b L S R R L L A S P P T S A E S S S C S A T P R T S V P V S S L R R - c G C Q G G C W P R P L R A P S H R V A P Q L Q G Q A C P * A R * E E - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d T T L S T A P R A G * S R R T M S N S R L E L S L R A R L S A L F - e P Q * P P Q Q G R G R R A G L * R T A G C S W P C A H G Y A R * S - f L N D L L N S A E G G V L A S D D L Q E A V G L V L T G T L E S L L - EagI KpnI | BpmI SalI SacI | | | | | AGACTCGGTACCTTCGGCCGTGCCAAGGCCAAGGTCGACGAGCTCCAGCGTGTCATCGCTGAGTCTCGCCGTGCTGGTCACTAAATCGCTTAATCTGATT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TCTGAGCCATGGAAGCCGGCACGGTTCCGGTTCCAGCTGCTCGAGGTCGCACAGTAGCGACTCAGAGCGGCACGACCAGTGATTTAGCGAATTAGACTAA a R L G T F G R A K A K V D E L Q R V I A E S R R A G H * I A * S D F - b D S V P S A V P R P R S T S S S V S S L S L A V L V T K S L N L I - c T R Y L R P C Q G Q G R R A P A C H R * V S P C W S L N R L I * F - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d L S P V K P R A L A L T S S S W R T M A S D R R A P * * I A * D S - e S V R Y R R G H W P W P R R A G A H * R Q T E G H Q D S F R K I Q N - f S E T G E A T G L G L D V L E L T D D S L R A T S T V L D S L R I - HgiEII | TCTGGGAATCTGGAACCGAATGGGGTTCGCATGGATTGGCGTGGTCACGGTATGATCTAAAAAATTAACGGCTTTGATGCTCCGTGGCAAAGAAGCTGCG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AGACCCTTAGACCTTGGCTTACCCCAAGCGTACCTAACCGCACCAGTGCCATACTAGATTTTTTAATTGCCGAAACTACGAGGCACCGTTTCTTCGACGC a W E S G T E W G S H G L A W S R Y D L K N * R L * C S V A K K L R - b S G N L E P N G V R M D W R G H G M I * K I N G F D A P W Q R S C G - c L G I W N R M G F A W I G V V T V * S K K L T A L M L R G K E A A - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d K Q S D P V S H P E C P N A H D R Y S R F F * R S Q H E T A F F S R - e R P I Q F R I P N A H I P T T V T H D L F N V A K I S R P L S A A - f E P F R S G F P T R M S Q R P * P I I * F I L P K S A G H C L L Q - BsbI XhoI ApaI KpnI | | | | GCTCACCGGAATACCAACACTTTCAAGCAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CGAGTGGCCTTATGGTTGTGAAAGTTCGTTTTTTTTTTTTTTTTTTGAGCTCCCCCCCGGGCCATGGGTTAAGCGGGATATCACTCAGCATAATGTTAAG a L T G I P T L S S K K K K K K L E G G P G T Q F A L * * V V L Q F - b S P E Y Q H F Q A K K K K K N S R G G P V P N S P Y S E S Y Y N S - c A H R N T N T F K Q K K K K K T R G G A R Y P I R P I V S R I T I H - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d S V P I G V S E L L F F F F F S S P P G P V W N A R Y H T T N C N - e A * R F V L V K L C F F F F F V R P P A R Y G I R G I T L R I V I - f P E G S Y W C K * A F F F F F F E L P P G T G L E G * L S D Y * L E - BglI BfiI PvuII | | | | ACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGGCGTATAGC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 TGACCGGCAGCAAAATGTTGCAGCACTGACCCTTTTGGGACCGCAATGGGTTGAATTAGCGGAACGTCGTGTAGGGGGAAAGCGGTCGACCCGCATATCG a T G R R F T T S * L G K P W R Y P T * S P C S T S P F R Q L G V * R - b L A V V L Q R R D W E N P G V T Q L N R L A A H P P F A S W A Y S - c W P S F Y N V V T G K T L A L P N L I A L Q H I P L S P A G R I A - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d V P R R K V V D H S P F G Q R * G V * D G Q L V D G K R W S P T Y - e * Q G D N * L T T V P F V R A N G L K I A K C C M G R E G A P R I A - f S A T T K C R R S Q S F G P T V W S L R R A A C G G K A L Q A Y L - PvuI FspI BglI | | | GAAGAAGCCCGCACCGATCGCCCTTCCAACAGTTGCGCAGCCTGAATGGCGAATGGCAAATTGTTAGCGGTTATATTTTTGTTAAAATTCGCGGTTAAAT 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 CTTCTTCGGGCGTGGCTAGCGGGAAGGTTGTCAACGCGTCGGACTTACCGCTTACCGTTTAACAATCGCCAATATAAAAACAATTTTAAGCGCCAATTTA a R S P H R S P F Q Q L R S L N G E W Q I V S G Y I F V K I R G * I - b E E A R T D R P S N S C A A * M A N G K L L A V I F L L K F A V K F - c K K P A P I A L P T V A Q P E W R M A N C * R L Y F C * N S R L N - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d R L L G C R D G K W C N R L R F P S H C I T L P * I K T L I R P * I - e F F G A G I A R G V T A C G S H R I A F Q * R N Y K Q * F E R N F - f S S A R V S R G E L L Q A A Q I A F P L N N A T I N K N F N A T L - AceIII | TTTTTGTTAATCAGCTCATTTTTTACCCAATGGCCCGAATCGGCAAAATCCCTATAAATCCAAAGAATTACCCGGATGGGGTTGAATGTTGTTCCAGTTT 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 AAAAACAATTAGTCGAGTAAAAAATGGGTTACCGGGCTTAGCCGTTTTAGGGATATTTAGGTTTCTTAATGGGCCTACCCCAACTTACAACAAGGTCAAA a F C * S A H F L P N G P N R Q N P Y K S K E L P G W G * M L F Q F - b F V N Q L I F Y P M A R I G K I P I N P K N Y P D G V E C C S S L - c F L L I S S F F T Q W P E S A K S L * I Q R I T R M G L N V V P V W - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d K Q * D A * K K G L P G F R C F G * L D L S N G P H P Q I N N W N - e K K N I L E N K V W H G S D A F D R Y I W L I V R I P N F T T G T - f N K T L * S M K * G I A R I P L I G I F G F F * G S P T S H Q E L K - DraI | GGAACAAGAGTTCCCTTTTAAAAAACCGTGGACTTCCCACGTCAAAGGGGCGAAAAAACCGCTTTTAAGGGGAA 901 ---------+---------+---------+---------+---------+---------+---------+---- 974 CCTTGTTCTCAAGGGAAAATTTTTTGGCACCTGAAGGGTGCAGTTTCCCCGCTTTTTTGGCGAAAATTCCCCTT a G T R V P F * K T V D F P R Q R G E K T A F K G - b E Q E F P F K K P W T S H V K G A K K P L L R G - c N K S S L L K N R G L P T S K G R K N R F * G E - 901 ---------+---------+---------+---------+---------+---------+---------+---- 974 d P V L T G K * F V T S K G R * L P S F V A K L P F - e Q F L L E R K F F R P S G V D F P R F F R K * P S - f S C S N G K L F G H V E W T L P A F F G S K L P - Enzymes that do cut: AceIII ApaI BamHI BcgI BfiI BglI BpmI Bpu10I BsbI BsrBI BssSI BstEII DraI DrdII EagI EarI EcoNI EcoRI FspI HgiEII KpnI NotI NruI Pfl1108I PstI PvuI PvuII SacI SacII SalI SmaI SpeI XbaI XhoI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI Bce83I BclI BglII BplI Bpu1102I BsaI BsaBI BsaXI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraIII DrdI EciI Eco47III Eco57I EcoRV FseI HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I RcaI RsrII SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XcmI XmnI