(Linear) MAP of: ./Fgr-C_02_A17_T3.seq check: 8325 from: 1 to: 933 Fgr-C_02_A17_T3 933 11 730 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI | | | | | | | | | | | | GGGTCAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGGTCCTCAACTTCTTTACTA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCAGTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCCAGGAGTTGAAGAAATGAT a G S K A G A P R G G G R S R T S G S P G L Q E F G T R V L N F F T T - b G Q K L E L P A V A A A L E L V D P P G C R N S A R G S S T S L L - c V K S W S S P R W R P L * N * W I P R A A G I R H E G P Q L L Y Y - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P * F S S S G A T A A A R S S T S G G P Q L F E A R P D E V E K S - e D F A P A G R P P P R E L V L P D G P S C S N P V L T R L K K V - f T L L Q L E G R H R G S * F * H I G R A A P I R C S P G * S R * * - BstXI BpmI BglII | HgiEII |NruI | | | | | CATCACCCTCAGTTACATCATAGCAAAAATGGGCGTCACCGACCGCATTATTCAGATTGGAGGCCAGATCTCTGGCAACCCGACCGCTGGCGGTCGCGAG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GTAGTGGGAGTCAATGTAGTATCGTTTTTACCCGCAGTGGCTGGCGTAATAAGTCTAACCTCCGGTCTAGAGACCGTTGGGCTGGCGACCGCCAGCGCTC a S P S V T S * Q K W A S P T A L F R L E A R S L A T R P L A V A R - b H H P Q L H H S K N G R H R P H Y S D W R P D L W Q P D R W R S R E - c I T L S Y I I A K M G V T D R I I Q I G G Q I S G N P T A G G R E - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d C * G * N C * L L F P R * R G C * E S Q L G S R Q C G S R Q R D R - e V D G E T V D Y C F H A D G V A N N L N S A L D R A V R G S A T A L - f M V R L * M M A F I P T V S R M I * I P P W I E P L G V A P P R S - EcoRV BsmI | | AAGATCCTCCAGAAGAACCCTGATGATATCGTTGTCACCGCCGCCTGCCGAAGCGCATTCACCAAGGGTGGCCGTGGTGGTTTCAAGGACACCCACGCTG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TTCTAGGAGGTCTTCTTGGGACTACTATAGCAACAGTGGCGGCGGACGGCTTCGCGTAAGTGGTTCCCACCGGCACCACCAAAGTTCCTGTGGGTGCGAC a R S S R R T L M I S L S P P P A E A H S P R V A V V V S R T P T L - b D P P E E P * * Y R C H R R L P K R I H Q G W P W W F Q G H P R C - c K I L Q K N P D D I V V T A A C R S A F T K G G R G G F K D T H A A - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d S S G G S S G Q H Y R Q * R R R G F R M * W P H G H H N * P C G R Q - e L D E L L V R I I D N D G G G A S A C E G L T A T T T E L V G V S - f F I R W F F G S S I T T V A A Q R L A N V L P P R P P K L S V W A - Bce83I Sse8647I DrdI BcgI | | | | CTGACTTGATGGCCGGAGTCCTCAAGGCTATCCTCGACCGTTCAAAGATCAACCCCGCGCTCGTCGAGGACCTATGTGTCGGCACTGTGCTTGCCCCCGG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GACTGAACTACCGGCCTCAGGAGTTCCGATAGGAGCTGGCAAGTTTCTAGTTGGGGCGCGAGCAGCTCCTGGATACACAGCCGTGACACGAACGGGGGCC a L T * W P E S S R L S S T V Q R S T P R S S R T Y V S A L C L P P V - b * L D G R S P Q G Y P R P F K D Q P R A R R G P M C R H C A C P R - c D L M A G V L K A I L D R S K I N P A L V E D L C V G T V L A P G - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d Q S S P R L G * P * G R G N L S * G R A R R P G I H R C Q A Q G R - e S V Q H G S D E L S D E V T * L D V G R E D L V * T D A S H K G G - f A S K I A P T R L A I R S R E F I L G A S T S S R H T P V T S A G P - NgoAIV EarI AceIII BcgI | BpmI SapI BsaI | | | | | | TGGTGGTGCGACTGAGATGCGAGCTGCCAGCTTGGTCGCCGGCTTCCCCGAGTCCATCGCCGTCCGAACCCTCAACCGACAGTGCTCTTCTGGTCTCCAG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 ACCACCACGCTGACTCTACGCTCGACGGTCGAACCAGCGGCCGAAGGGGCTCAGGTAGCGGCAGGCTTGGGAGTTGGCTGTCACGAGAAGACCAGAGGTC a V V R L R C E L P A W S P A S P S P S P S E P S T D S A L L V S R - b W W C D * D A S C Q L G R R L P R V H R R P N P Q P T V L F W S P G - c G G A T E M R A A S L V A G F P E S I A V R T L N R Q C S S G L Q - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d H H H S Q S A L Q W S P R R S G R T W R R G F G * G V T S K Q D G - e T T T R S L H S S G A Q D G A E G L G D G D S G E V S L A R R T E L - f P P A V S I R A A L K T A P K G S D M A T R V R L R C H E E P R W - EcoRV BsaBI | XcmI ClaI | | BsbI | | | | | GCCACCGTCGATGTCGCCAACCAGATCAAGACTGGCATGATCGATATCGGTATTGGTGCTGGTGTTGAGAGCATGTCCATCAACTACGGTCCCGGTGCTG 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CGGTGGCAGCTACAGCGGTTGGTCTAGTTCTGACCGTACTAGCTATAGCCATAACCACGACCACAACTCTCGTACAGGTAGTTGATGCCAGGGCCACGAC a P P S M S P T R S R L A * S I S V L V L V L R A C P S T T V P V L - b H R R C R Q P D Q D W H D R Y R Y W C W C * E H V H Q L R S R C C - c A T V D V A N Q I K T G M I D I G I G A G V E S M S I N Y G P G A V - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d P W R R H R W G S * S Q C S R Y R Y Q H Q H Q S C T W * S R D R H Q - e G G D I D G V L D L S A H D I D T N T S T N L A H G D V V T G T S - f A V T S T A L W I L V P M I S I P I P A P T S L M D M L * P G P A - NspV BseRI MscI | | | TCGGTGAGTTCTCTGAGGAGTTCGAAAAGGTCCCCGAGGCTGCCAACTGCAAGGTCCCTATGGGTGTTCTGTCTGAGCAGATGGCCAAGGATCTTGGTAT 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 AGCCACTCAAGAGACTCCTCAAGCTTTTCCAGGGGCTCCGACGGTTGACGTTCCAGGGATACCCACAAGACAGACTCGTCTACCGGTTCCTAGAACCATA a S V S S L R S S K R S P R L P T A R S L W V F C L S R W P R I L V S - b R * V L * G V R K G P R G C Q L Q G P Y G C S V * A D G Q G S W Y - c G E F S E E F E K V P E A A N C K V P M G V L S E Q M A K D L G I - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d R H T R Q P T R F P G R P Q W S C P G * P H E T Q A S P W P D Q Y - e D T L E R L L E F L D G L S G V A L D R H T N Q R L L H G L I K T - f T P S N E S S N S F T G S A A L Q L T G I P T R D S C I A L S R P I - BglI Bce83I Bce83I SfiI BcgI BsaI | BseRI | | | | | | CACCCGACAGGCGCAAGACACTTTCGCCGCCTCATCATACCAGAAGGCCCTCAAGGCCCAAAAAGAGGGTCTCTTTGACGAGGAGATTGCTCCCCTCAAG 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 GTGGGCTGTCCGCGTTCTGTGAAAGCGGCGGAGTAGTATGGTCTTCCGGGAGTTCCGGGTTTTTCTCCCAGAGAAACTGCTCCTCTAACGAGGGGAGTTC a P D R R K T L S P P H H T R R P S R P K K R V S L T R R L L P S R - b H P T G A R H F R R L I I P E G P Q G P K R G S L * R G D C S P Q G - c T R Q A Q D T F A A S S Y Q K A L K A Q K E G L F D E E I A P L K - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d * G V P A L C K R R R M M G S P G * P G F L P D R Q R P S Q E G * - e D G S L R L V S E G G * * V L L G E L G L F L T E K V L L N S G E L - f V R C A C S V K A A E D Y W F A R L A W F S P R K S S S I A G R L - BcgI BsmBI Tth111I | | | GTCAAGTTCGAGGACAGGGAGGGTAACACCAANGAAATCACCGTCTCCAAGATGACNGTGTCCGAAAGGCATCACCGTCNAGTCCCCTCGCAAGACCGCC 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 CAGTTCAAGCTCCTGTCCCTCCCATTGTGGTTNCTTTAGTGGCAGAGGTTCTACTGNCACAGGCTTTCCGTAGTGGCAGNTCAGGGGAGCGTTCTGGCGG a S S S R T G R V T P ? K S P S P R * ? C P K G I T V ? S P R K T A - b Q V R G Q G G * H Q ? N H R L Q D D ? V R K A S P S S P L A R P P - c V K F E D R E G N T ? E I T V S K M T V S E R H H R ? V P S Q D R P - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d P * T R P C P P Y C W ? F * R R W S S ? T R F A D G D L G R A L G G - e D L E L V P L T V G ? F D G D G L H ? H G F P M V T ? D G R L V A - f T L N S S L S P L V L S I V T E L I V T D S L C * R ? T G E C S R - EcoNI BamHI | | CTGCCTTTGCCAGGGATGGATCCATCCACGCTG 901 ---------+---------+---------+--- 933 GACGGAAACGGTCCCTACCTAGGTAGGTGCGAC a L P L P G M D P S T L - b C L C Q G W I H P R - c A F A R D G S I H A - 901 ---------+---------+---------+--- 933 d Q R Q W P H I W G R Q - e R G K G P I S G D V S - f G A K A L S P D M W A - Enzymes that do cut: AceIII BamHI Bce83I BcgI BglI BglII BpmI BsaI BsaBI BsbI BseRI BsmI BsmBI BsrBI BssSI BstXI ClaI DrdI EagI EarI EcoNI EcoRI EcoRV HgiEII MscI NgoAIV NotI NruI NspV PstI SacI SacII SapI SfiI SmaI SpeI Sse8647I Tth111I XbaI XcmI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaI ApaBI ApaLI AscI AvrII BbsI BclI BfiI BplI Bpu10I Bpu1102I BsaXI BsgI BsiWI BspEI BspGI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I BstEII Bsu36I DraI DraIII DrdII EciI Eco47III Eco57I FseI FspI HindIII HpaI KpnI MfeI MluI NarI NcoI NdeI NheI NsiI PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SalI SanDI ScaI SexAI SgfI SgrAI SnaBI SphI SrfI Sse8387I SspI StuI SwaI VspI XhoI XmnI