(Linear) MAP of: ./Fgr-C_02_A18_T3.seq check: 2563 from: 1 to: 937 Fgr-C_02_A18_T3 937 10 723 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | SmaI EagI | | | BspMI | NspV BsaI SacI SacII NotI | | | SpeI BamHI | | PstI | PinAI | | | | | | | | | | | | | | | GGGTAAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGTTCGAACTCTGACCACCGTTACCACCGGTTCTG 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCATTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCAAGCTTGAGACTGGTGGCAATGGTGGCCAAGAC a G * K A G A P R G G G R S R T S G S P G L Q V R T L T T V T T G S E - b G K K L E L P A V A A A L E L V D P P G C R F E L * P P L P P V L - c V K S W S S P R W R P L * N * W I P R A A G S N S D H R Y H R F * - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d T F L Q L E G R H R G S * F * H I G R A A P E F E S W R * W R N Q - e P L F S S S G A T A A A R S S T S G G P Q L N S S Q G G N G G T R - f Y F A P A G R P P P R E L V L P D G P S C T R V R V V T V V P E - BstEII BplI Bpu10I | BcgI BcgI PinAI | | | | | | AGACCGACTCTGCTGACACTGCTGAGGTCACCACATTCACCACTGATGGCACCGAGGTCGTCCGAACTCTGACCACCGTTACTACCGGTTCTGAGTCCGA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TCTGGCTGAGACGACTGTGACGACTCCAGTGGTGTAAGTGGTGACTACCGTGGCTCCAGCAGGCTTGAGACTGGTGGCAATGATGGCCAAGACTCAGGCT a T D S A D T A E V T T F T T D G T E V V R T L T T V T T G S E S E - b R P T L L T L L R S P H S P L M A P R S S E L * P P L L P V L S P S - c D R L C * H C * G H H I H H * W H R G R P N S D H R Y Y R F * V R - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d S R S Q Q C Q Q P * W M * W Q H C R P R G F E S W R * * R N Q T R - e L G V R S V S S L D G C E G S I A G L D D S S Q G G N S G T R L G - f S V S E A S V A S T V V N V V S P V S T T R V R V V T V V P E S D S - Eco47III StuI EciI | | | | GTCTGGATCTGTTTCGGAGACTGTTACTGACGCCTCCACCGTCACCGAGGGCTCTGGCACTGCTACTGGCACTGAGGCCTCCGCCAGCGCTTCTTCTACC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CAGACCTAGACAAAGCCTCTGACAATGACTGCGGAGGTGGCAGTGGCTCCCGAGACCGTGACGATGACCGTGACTCCGGAGGCGGTCGCGAAGAAGATGG a S G S V S E T V T D A S T V T E G S G T A T G T E A S A S A S S T - b L D L F R R L L L T P P P S P R A L A L L L A L R P P P A L L L P - c V W I C F G D C Y * R L H R H R G L W H C Y W H * G L R Q R F F Y R - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d T Q I Q K P S Q * Q R R W R * R P S Q C Q * Q C Q P R R W R K K * - e L R S R N R L S N S V G G G D G L A R A S S S A S L G G G A S R R G - f D P D T E S V T V S A E V T V S P E P V A V P V S A E A L A E E V - BsaI BseRI BseRI | | | GAAACTGACAACGCTGCTGTTGCTCAGATGACTGGTGCCCCTATGGGCGTCATCGCCGCTGCTGGTCTCGCTATGCTCCTCCTCTAAATCAAGGATGGAT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CTTTGACTGTTGCGACGACAACGAGTCTACTGACCACGGGGATACCCGCAGTAGCGGCGACGACCAGAGCGATACGAGGAGGAGATTTAGTTCCTACCTA a E T D N A A V A Q M T G A P M G V I A A A G L A M L L L * I K D G F - b K L T T L L L L R * L V P L W A S S P L L V S L C S S S K S R M D - c N * Q R C C C S D D W C P Y G R H R R C W S R Y A P P L N Q G W I - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d R F Q C R Q Q Q E S S Q H G * P R * R R Q Q D R * A G G R F * P H I - e F S V V S S N S L H S T G R H A D D G S S T E S H E E E L D L I S - f S V S L A A T A * I V P A G I P T M A A A P R A I S R R * I L S P - Bpu10I BspLU11I SanDI | | | | TCGATTTTGACGTTTAATGCTTTTTANCGTTGCACATGTTTGTTACATAATTCACGCCTGTACCTCGATCTTTTGGGACCCTTAGCATATTTCCTCGGTG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AGCTAAAACTGCAAATTACGAAAAATNGCAACGTGTACAAACAATGTATTAAGTGCGGACATGGAGCTAGAAAACCCTGGGAATCGTATAAAGGAGCCAC a D F D V * C F L ? L H M F V T * F T P V P R S F G T L S I F P R C - b S I L T F N A F ? R C T C L L H N S R L Y L D L L G P L A Y F L G A - c R F * R L M L F ? V A H V C Y I I H A C T S I F W D P * H I S S V - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d R N Q R K I S K ? T A C T Q * M I * A Q V E I K Q S G * C I E E T - e E I K V N L A K * R Q V H K N C L E R R Y R S R K P G K A Y K R P - f N S K S T * H K K ? N C M N T V Y N V G T G R D K P V R L M N G R H - BspMI BcgI | BcgI | | | CAAGGAGTCGGTTTGCGGAAGAATCTTCACATTATGGAGAAATGGAAACGAGGTGAATGGACATGACAGGGCAGGTTTTTCGAGGCTTTAATGACGCATA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 GTTCCTCAGCCAAACGCCTTCTTAGAAGTGTAATACCTCTTTACCTTTGCTCCACTTACCTGTACTGTCCCGTCCAAAAAGCTCCGAAATTACTGCGTAT a K E S V C G R I F T L W R N G N E V N G H D R A G F S R L * * R I - b R S R F A E E S S H Y G E M E T R * M D M T G Q V F R G F N D A Y - c Q G V G L R K N L H I M E K W K R G E W T * Q G R F F E A L M T H T - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d C P T P K R F F R * M I S F H F R P S H V H C P L N K S A K I V C - e A L L R N A S S D E C * P S I S V L H I S M V P C T K R P K L S A Y - f L S D T Q P L I K V N H L F P F S T F P C S L A P K E L S * H R M - BseRI BsmBI | BsaXI | | | | | CGGCTTATCTCTCCTTTAATGGACACGACAAGAAATGTTAGAACGGATGGGATTTTGATGTTGTTTGTGAGGCGAGGAGGTGGCGTGACATGAGACGACG 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 GCCGAATAGAGAGGAAATTACCTGTGCTGTTCTTTACAATCTTGCCTACCCTAAAACTACAACAAACACTCCGCTCCTCCACCGCACTGTACTCTGCTGC a R L I S P L M D T T R N V R T D G I L M L F V R R G G G V T * D D D - b G L S L L * W T R Q E M L E R M G F * C C L * G E E V A * H E T T - c A Y L S F N G H D K K C * N G W D F D V V C E A R R W R D M R R R - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d V A * R E K L P C S L F H * F P H S K S T T Q S A L L H R S M L R R - e P K D R R * H V R C S I N S R I P N Q H Q K H P S S T A H C S V V - f R S I E G K I S V V L F T L V S P I K I N N T L R P P P T V H S S - BssSI SphI| StuI BsbI SmaI || | | | ACGGGAGATGGCATGCTCGTGCTGCCGTCACACAAGGCCTGTGTTGTCTTTCATGGTTACATGGGTTCTGGGATGGGTGGTGATACCCGGGCCGACGGCC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 TGCCCTCTACCGTACGAGCACGACGGCAGTGTGTTCCGGACACAACAGAAAGTACCAATGTACCCAAGACCCTACCCACCACTATGGGCCCGGCTGCCGG a G R W H A R A A V T Q G L C C L S W L H G F W D G W * Y P G R R P - b T G D G M L V L P S H K A C V V F H G Y M G S G M G G D T R A D G L - c R E M A C S C C R H T R P V L S F M V T W V L G W V V I P G P T A - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d R S I A H E H Q R * V L G T N D K M T V H T R P H T T I G P G V A - e V P S P M S T S G D C L A Q T T K * P * M P E P I P P S V R A S P - f S P L H C A R A A T V C P R H Q R E H N C P N Q S P H H Y G P R R G - BsmI BpmI | | TGACTTCGGGGGTGGACTTTGCTTCTCGCATTCATTGAGAATTANTAATAGATAATCTTCTTTACGACTTNNNNNANNNNNNNNANNNNNNNCCTCCAGG 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 ACTGAAGCCCCCACCTGAAACGAAGAGCGTAAGTAACTCTTAATNATTATCTATTAGAAGAAATGCTGAANNNNNTNNNNNNNNTNNNNNNNGGAGGTCC a D F G G G L C F S H S L R I ? N R * S S L R L ? ? ? ? ? ? ? ? S R - b T S G V D F A S R I H * E L ? I D N L L Y D ? ? ? ? ? ? ? ? P P G - c * L R G W T L L L A F I E N ? * * I I F F T T ? ? ? ? ? ? ? ? L Q G - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d Q S R P H V K S R A N M S F * ? Y I I K K V V ? ? ? ? ? ? ? ? R W - e R V E P T S K A E R M * Q S N ? I S L R R * S K ? ? ? ? ? ? ? G G P - f S K P P P S Q K E C E N L I ? L L Y D E K R S ? ? ? ? ? ? ? ? E L - SmaI SrfI ApaI| ApaI || | GGGGGCCCGGGCCCCATTTGCCCTATATTGAATCGTA 901 ---------+---------+---------+------- 937 CCCCCGGGCCCGGGGTAAACGGGATATAACTTAGCAT a G G P G P I C P I L N R - b G A R A P F A L Y * I V - c G P G P H L P Y I E S - 901 ---------+---------+---------+------- 937 d P P G P G W K G * I S D Y - e P A R A G N A R Y Q I T - f P P G P G M Q G I N F R - Enzymes that do cut: ApaI BamHI BcgI BplI BpmI Bpu10I BsaI BsaXI BsbI BseRI BsmI BsmBI BspLU11I BspMI BsrBI BssSI BstEII EagI EciI Eco47III NotI NspV PinAI PstI SacI SacII SanDI SmaI SpeI SphI SrfI StuI XbaI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI Bce83I BclI BfiI BglI BglII Bpu1102I BsaBI BsgI BsiWI BspEI BspGI BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI Eco57I EcoNI EcoRI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SalI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI Sse8387I Sse8647I SspI SwaI Tth111I VspI XcmI XhoI XmnI