(Linear) MAP of: ./Fgr-C_02_A19_T3.seq check: 6823 from: 1 to: 942 Fgr-C_02_A19_T3 942 11 783 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI | | | | | | | | | | | | GGGGAAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTTGTTCAAGGGAAAGCCC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCCTTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCGAACAAGTTCCCTTTCGGG a G E K A G A P R G G G R S R T S G S P G L Q E F G T R L V Q G K A H - b G K K L E L P A V A A A L E L V D P P G C R N S A R G L F K G K P - c G K S W S S P R W R P L * N * W I P R A A G I R H E A C S R E S P - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P F F S S S G A T A A A R S S T S G G P Q L F E A R P K N L P F G - e S F A P A G R P P P R E L V L P D G P S C S N P V L S T * P F A - f P F L Q L E G R H R G S * F * H I G R A A P I R C S A Q E L S L G - BbsI HgiEII SphI EciI | | | | ATCACAGCCGCAATCATGTCTTCCGCTGAACCCCAGAAGGTCTTGGGCATGCCCCCCTTCGTTGCTGACTTCCTCATGGGTGGTGTCTCCGCCGCTGTCT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TAGTGTCGGCGTTAGTACAGAAGGCGACTTGGGGTCTTCCAGAACCCGTACGGGGGGAAGCAACGACTGAAGGAGTACCCACCACAGAGGCGGCGACAGA a H S R N H V F R * T P E G L G H A P L R C * L P H G W C L R R C L - b I T A A I M S S A E P Q K V L G M P P F V A D F L M G G V S A A V S - c S Q P Q S C L P L N P R R S W A C P P S L L T S S W V V S P P L S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d M V A A I M D E A S G W F T K P M G G K T A S K R M P P T E A A T - e W * L R L * T K R Q V G S P R P C A G R R Q Q S G * P H H R R R Q R - f D C G C D H R G S F G L L D Q A H G G E N S V E E H T T D G G S D - DrdII AhdI BseRI Bce83I| PinAI | BsmBI | || | | | CCAAGACTGCTGCTGCCCCCATCGAGCGTGTCAAGCTCCTCATCCAGAACCAGGATGAGATGCTCAAGACCGGTCGTCTCGACCGCAAGTACAACGGCAT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GGTTCTGACGACGACGGGGGTAGCTCGCACAGTTCGAGGAGTAGGTCTTGGTCCTACTCTACGAGTTCTGGCCAGCAGAGCTGGCGTTCATGTTGCCGTA a Q D C C C P H R A C Q A P H P E P G * D A Q D R S S R P Q V Q R H - b K T A A A P I E R V K L L I Q N Q D E M L K T G R L D R K Y N G I - c P R L L L P P S S V S S S S S R T R M R C S R P V V S T A S T T A L - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d E L V A A A G M S R T L S R M W F W S S I S L V P R R S R L Y L P M - e W S Q Q Q G W R A H * A G * G S G P H S A * S R D D R G C T C R C - f G L S S S G G D L T D L E E D L V L I L H E L G T T E V A L V V A - NcoI AlwNI | | TGGTGACTGCTTCAAGCGCACCATGGCTGATGAGGGTGTCATGTCCCTCTGGCGAGGAAACACCGCCAACGTCATCCGATACTTCCCTACCCAGGCTCTG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 ACCACTGACGAAGTTCGCGTGGTACCGACTACTCCCACAGTACAGGGAGACCGCTCCTTTGTGGCGGTTGCAGTAGGCTATGAAGGGATGGGTCCGAGAC a W * L L Q A H H G * * G C H V P L A R K H R Q R H P I L P Y P G S E - b G D C F K R T M A D E G V M S L W R G N T A N V I R Y F P T Q A L - c V T A S S A P W L M R V S C P S G E E T P P T S S D T S L P R L * - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d P S Q K L R V M A S S P T M D R Q R P F V A L T M R Y K G V W A R - e Q H S S * A C W P Q H P H * T G R A L F C R W R * G I S G * G P E - f N T V A E L A G H S I L T D H G E P S S V G G V D D S V E R G L S Q - XmnI BstXI BstEII BsaXI | | | | AACTTCGCTTTCCGTGACAAGTTCAAGAAGATGTTCGGTTACAAGAAGGACAAGGATGGCTACGCCATGTGGATGGCCGGTAACCTTGCCTCCGGTGGTG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 TTGAAGCGAAAGGCACTGTTCAAGTTCTTCTACAAGCCAATGTTCTTCCTGTTCCTACCGATGCGGTACACCTACCGGCCATTGGAACGGAGGCCACCAC a L R F P * Q V Q E D V R L Q E G Q G W L R H V D G R * P C L R W C - b N F A F R D K F K K M F G Y K K D K D G Y A M W M A G N L A S G G A - c T S L S V T S S R R C S V T R R T R M A T P C G W P V T L P P V V - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d F K A K R S L N L F I N P * L F S L S P * A M H I A P L R A E P P - e S S R K G H C T * S S T R N C S P C P H S R W T S P R Y G Q R R H H - f V E S E T V L E L L H E T V L L V L I A V G H P H G T V K G G T T - EarI BspGI BstEII | | | CTGCTGGTGCCACTTCTCTTCTATTCGTCTACTCTCTGGACTACGCCCGTACTCGTCTTGCCAACGATGCCAAGAACGCCAAGTCCGGTGGTGACCGTCA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 GACGACCACGGTGAAGAGAAGATAAGCAGATGAGAGACCTGATGCGGGCATGAGCAGAACGGTTGCTACGGTTCTTGCGGTTCAGGCCACCACTGGCAGT a C W C H F S S I R L L S G L R P Y S S C Q R C Q E R Q V R W * P S - b A G A T S L L F V Y S L D Y A R T R L A N D A K N A K S G G D R Q - c L L V P L L F Y S S T L W T T P V L V L P T M P R T P S P V V T V S - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d A A P A V E R R N T * E R S * A R V R R A L S A L F A L D P P S R * - e Q Q H W K E E I R R S E P S R G Y E D Q W R H W S R W T R H H G D - f S S T G S R K * E D V R Q V V G T S T K G V I G L V G L G T T V T - BsaI SalI AatII BbsI BsaI | | | | GTTCAACGGTCTCGTCGACGTCTACAAGAAGACCCTCGCCTCTGACGGTATTGCCGGTCTCTACCGTGGTTTCATGCCCTCCGTTGCTGGTATCGTCGTC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CAAGTTGCCAGAGCAGCTGCAGATGTTCTTCTGGGAGCGGAGACTGCCATAACGGCCAGAGATGGCACCAAAGTACGGGAGGCAACGACCATAGCAGCAG a V Q R S R R R L Q E D P R L * R Y C R S L P W F H A L R C W Y R R L - b F N G L V D V Y K K T L A S D G I A G L Y R G F M P S V A G I V V - c S T V S S T S T R R P S P L T V L P V S T V V S C P P L L V S S S - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d N L P R T S T * L F V R A E S P I A P R * R P K M G E T A P I T T - e T * R D R R R R C S S G R R Q R Y Q R D R G H N * A R R Q Q Y R R - f L E V T E D V D V L L G E G R V T N G T E V T T E H G G N S T D D D - BstEII BsaI BpmI PinAI | | | | | TACCGTGGTCTCTACTTCGGAATGTACGACTCTATCAAGCCCGTCGTCCTCACCGGTAACCTCCAGGGCAACTTCCTTGCCTCTTTCGCTCTTGGTTGGA 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 ATGGCACCAGAGATGAAGCCTTACATGCTGAGATAGTTCGGGCAGCAGGAGTGGCCATTGGAGGTCCCGTTGAAGGAACGGAGAAAGCGAGAACCAACCT a P W S L L R N V R L Y Q A R R P H R * P P G Q L P C L F R S W L D - b Y R G L Y F G M Y D S I K P V V L T G N L Q G N F L A S F A L G W I - c T V V S T S E C T T L S S P S S S P V T S R A T S L P L S L L V G - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d * R P R * K P I Y S E I L G T T R V P L R W P L K R A E K A R P Q - e R G H D R S R F T R S * * A R R G * R Y G G P C S G Q R K R E Q N S - f V T T E V E S H V V R D L G D D E G T V E L A V E K G R E S K T P - EciI | TCGTCACCACTGGTGCCCGTATCGCCTCTTACCCTCTTGACACTATCCGCCGACGTATGATGATGACCTCCGGTGAGGCCGTCAAGTACAAGAACAACCT 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 AGCAGTGGTGACCACGGGCATAGCGGAGAATGGGAGAACTGTGATAGGCGGCTGCATACTACTACTGGAGGCCACTCCGGCAGTTCATGTTCTTGTTGGA a R H H W C P Y R L L P S * H Y P P T Y D D D L R * G R Q V Q E Q P - b V T T G A R I A S Y P L D T I R R R M M M T S G E A V K Y K N N L - c S S P L V P V S P L T L L T L S A D V * * * P P V R P S S T R T T W - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d I T V V P A R I A E * G R S V I R R R I I I V E P S A T L Y L F L R - e R * W Q H G Y R R K G E Q C * G G V Y S S S R R H P R * T C S C G - f D D G S T G T D G R V R K V S D A S T H H H G G T L G D L V L V V - BspGI | GGACGCTGCCCGCCAGATTGTCGCCAAGGAGGGTGTCAAGTT 901 ---------+---------+---------+---------+-- 942 CCTGCGACGGGCGGTCTAACAGCGGTTCCTCCCACAGTTCAA a G R C P P D C R Q G G C Q V - b D A A R Q I V A K E G V K - c T L P A R L S P R R V S S - 901 ---------+---------+---------+---------+-- 942 d S A A R W I T A L S P T L N - e P R Q G G S Q R W P P H * T - f Q V S G A L N D G L L T D L - Enzymes that do cut: AatII AhdI AlwNI BamHI BbsI Bce83I BpmI BsaI BsaXI BseRI BsmBI BspGI BsrBI BssSI BstEII BstXI DrdII EagI EarI EciI EcoRI HgiEII NcoI NotI PinAI PstI SacI SacII SalI SmaI SpeI SphI XbaI XmnI Enzymes that do not cut: AceIII AflII ApaI ApaBI ApaLI AscI AvrII BcgI BclI BfiI BglI BglII BplI Bpu10I Bpu1102I BsaBI BsbI BsgI BsiWI BsmI BspEI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I Bsu36I ClaI DraI DraIII DrdI Eco47III Eco57I EcoNI EcoRV FseI FspI HindIII HpaI KpnI MfeI MluI MscI NarI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XcmI XhoI