(Linear) MAP of: ./Fgr-C_02_A20_T3.seq check: 1927 from: 1 to: 951 Fgr-C_02_A20_T3 951 21 746 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI | | | | | | | | | | | | GGGGAAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGAATTAACAACAGCAGCAAC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCCTTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCTTAATTGTTGTCGTCGTTG a G E K A G A P R G G G R S R T S G S P G L Q E F G T R N * Q Q Q Q P - b G K K L E L P A V A A A L E L V D P P G C R N S A R G I N N S S N - c G K S W S S P R W R P L * N * W I P R A A G I R H E E L T T A A T - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P F F S S S G A T A A A R S S T S G G P Q L F E A R P I L L L L L - e S F A P A G R P P P R E L V L P D G P S C S N P V L F * C C C C - f P F L Q L E G R H R G S * F * H I G R A A P I R C S S N V V A A V - ApaBI EarI EagI SacII AlwNI| NruI | | | || | CGTCAAAATGGTCAAGAAGAGAAAGAACAACGGCCGAAACAAGAAGGGCCGCGGCCACGTCAAGCCCATCCGATGCAGCAACTGCTCGCGATGCACCCCC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 GCAGTTTTACCAGTTCTTCTCTTTCTTGTTGCCGGCTTTGTTCTTCCCGGCGCCGGTGCAGTTCGGGTAGGCTACGTCGTTGACGAGCGCTACGTGGGGG a S K W S R R E R T T A E T R R A A A T S S P S D A A T A R D A P P - b R Q N G Q E E K E Q R P K Q E G P R P R Q A H P M Q Q L L A M H P Q - c V K M V K K R K N N G R N K K G R G H V K P I R C S N C S R C T P - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d R * F P * S S F S C R G F C S P G R G R * A W G I C C S S A I C G - e G D F H D L L S L V V A S V L L A A A V D L G D S A A V A R S A G G - f T L I T L F L F F L P R F L F P R P W T L G M R H L L Q E R H V G - XcmI BbsI | | AAGGATAAGGCCATCAAGAGATTCACCATCCGCAACATGGTTGAGTCTGCTGCTATCCGTGACATCTCCGATGCCTCCGTCTTCGCGGAGTACACCGTCC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 TTCCTATTCCGGTAGTTCTCTAAGTGGTAGGCGTTGTACCAACTCAGACGACGATAGGCACTGTAGAGGCTACGGAGGCAGAAGCGCCTCATGTGGCAGG a R I R P S R D S P S A T W L S L L L S V T S P M P P S S R S T P S - b G * G H Q E I H H P Q H G * V C C Y P * H L R C L R L R G V H R P - c K D K A I K R F T I R N M V E S A A I R D I S D A S V F A E Y T V P - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d W P Y P W * S I * W G C C P Q T Q Q * G H C R R H R R R R P T C R G - e L I L G D L S E G D A V H N L R S S D T V D G I G G D E R L V G D - f L S L A M L L N V M R L M T S D A A I R S M E S A E T K A S Y V T - ScaI BseRI PstI | Eco57I EagI BseRI | | | | | | | CCAAGATGTACCTGAAGCTGCAGTACTGTGTCTCTTGCGCCATCCACGGCAAGATTGTCCGTGTCCGATCCGTTGTCGGCCGACGCAACCGTGCCCCTCC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GGTTCTACATGGACTTCGACGTCATGACACAGAGAACGCGGTAGGTGCCGTTCTAACAGGCACAGGCTAGGCAACAGCCGGCTGCGTTGGCACGGGGAGG a P R C T * S C S T V S L A P S T A R L S V S D P L S A D A T V P L L - b Q D V P E A A V L C L L R H P R Q D C P C P I R C R P T Q P C P S - c K M Y L K L Q Y C V S C A I H G K I V R V R S V V G R R N R A P P - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d W S T G S A A T S H R K R W G R C S Q G H G I R Q R G V C G H G E - e G L H V Q L Q L V T D R A G D V A L N D T D S G N D A S A V T G R - f G L I Y R F S C Y Q T E Q A M W P L I T R T R D T T P R R L R A G G - BglI Bsu36I | BcgI BcgI| | | || | TCCTCGCGTCCGCTACAACAAGGACGGCAAGAAGATCGTCCCTACTGCCCCTAAGGCTTAGATGGGTTGATACTTGGGATGGAGTCCGGTTATGATAGCA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 AGGAGCGCAGGCGATGTTGTTCCTGCCGTTCTTCTAGCAGGGATGACGGGGATTCCGAATCTACCCAACTATGAACCCTACCTCAGGCCAATACTATCGT a L A S A T T R T A R R S S L L P L R L R W V D T W D G V R L * * Q - b S S R P L Q Q G R Q E D R P Y C P * G L D G L I L G M E S G Y D S S - c P R V R Y N K D G K K I V P T A P K A * M G * Y L G W S P V M I A - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d E E R G S C C P R C S S R G * Q G * P K S P N I S P I S D P * S L - e R R A D A V V L V A L L D D R S G R L S L H T S V Q S P T R N H Y C - f G R T R * L L S P L F I T G V A G L A * I P Q Y K P H L G T I I A - BsmI XcmI BspGI MluI | | | | GCATTCAAAAAATGGATGGGATGAATACCTTTGGGATTATGAGACTAAGAAATTCCAAAAATCAACTGGACGACGTTTGATGTCTACGCGTCTTTGACAA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CGTAAGTTTTTTACCTACCCTACTTATGGAAACCCTAATACTCTGATTCTTTAAGGTTTTTAGTTGACCTGCTGCAAACTACAGATGCGCAGAAACTGTT a H S K N G W D E Y L W D Y E T K K F Q K S T G R R L M S T R L * Q - b I Q K M D G M N T F G I M R L R N S K N Q L D D V * C L R V F D K - c A F K K W M G * I P L G L * D * E I P K I N W T T F D V Y A S L T N - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d L M * F I S P I F V K P I I L S L F E L F * S S S T Q H R R T K S L - e C E F F P H S S Y R Q S * S V L F N W F D V P R R K I D V R R Q C - f A N L F H I P H I G K P N H S * S I G F I L Q V V N S T * A D K V - XhoI ApaI KpnI | | | ATTAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTC 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 TAATTTTTTTTTTTTTTTTTTTTGAGCTCCCCCCCGGGCCATGGGTTAAGCGGGATATCACTCAGCATAATGTTAAGTGACCGGCAGCAAAATGTTGCAG a I K K K K K K N S R G G P V P N S P Y S E S Y Y N S L A V V L Q R R - b L K K K K K K T R G G A R Y P I R P I V S R I T I H W P S F Y N V - c * K K K K K K L E G G P G T Q F A L * * V V L Q F T G R R F T T S - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d N F F F F F F V R P P A R Y G I R G I T L R I V I * Q G D N * L T - e I L F F F F F F E L P P G T G L E G * L S D Y * L E S A T T K C R - f F * F F F F F F S S P P G P V W N A R Y H T T N C N V P R R K V V D - BfiI PvuII EarI PvuI | | | | GTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 CACTGACCCTTTTGGGACCGCAATGGGTTGAATTAGCGGAACGTCGTGTAGGGGGAAAGCGGTCGACCGCATTATCGCTTCTCCGGGCGTGGCTAGCGGG a D W E N P G V T Q L N R L A A H P P F A S W R N S E E A R T D R P - b V T G K T L A L P N L I A L Q H I P L S P A G V I A K R P A P I A L - c * L G K P W R Y P T * S P C S T S P F R Q L A * * R R G P H R S P - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d T V P F V R A N G L K I A K C C M G R E G A P T I A F L G A G I A - e R S Q S F G P T V W S L R R A A C G G K A L Q R L L S S A R V S R G - f H S P F G Q R * G V * D G Q L V D G K R W S A Y Y R L P G C R D G - FspI BglI SspI | | | TTCCCAACAGTTGCGCAGCCTTGATGGCGAATGGCAAATTGTAAGCGTTAATATTTTGTTAAAAATTCGCGGTAAATTTTTTGTAATTCAACTCATTTTT 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 AAGGGTTGTCAACGCGTCGGAACTACCGCTTACCGTTTAACATTCGCAATTATAAAACAATTTTTAAGCGCCATTTAAAAAACATTAAGTTGAGTAAAAA a S Q Q L R S L D G E W Q I V S V N I L L K I R G K F F V I Q L I F - b P N S C A A L M A N G K L * A L I F C * K F A V N F L * F N S F F - c F P T V A Q P * W R M A N C K R * Y F V K N S R * I F C N S T H F L - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d R G L L Q A A K I A F P L N Y A N I N Q * F N A T F K K Y N L E N K - e E W C N R L R S P S H C I T L T L I K N F I R P L N K T I * S M K - f K G V T A C G Q H R I A F Q L R * Y K T L F E R Y I K Q L E V * K - VspI | TAACCAATAGGCCGAAATCGGCAAAATCCTTATTAATCAAAAGAATAGACC 901 ---------+---------+---------+---------+---------+- 951 ATTGGTTATCCGGCTTTAGCCGTTTTAGGAATAATTAGTTTTCTTATCTGG a * P I G R N R Q N P Y * S K E * T - b N Q * A E I G K I L I N Q K N R - c T N R P K S A K S L L I K R I D - 901 ---------+---------+---------+---------+---------+- 951 d L W Y A S I P L I R I L * F F L G - e * G I P R F R C F G * * D F S Y V - f K V L L G F D A F D K N I L L I S - Enzymes that do cut: AlwNI ApaI ApaBI BamHI BbsI BcgI BfiI BglI BpmI BseRI BsmI BspGI BsrBI BssSI Bsu36I EagI EarI Eco57I EcoRI FspI KpnI MluI NotI NruI PstI PvuI PvuII SacI SacII ScaI SmaI SpeI SspI VspI XbaI XcmI XhoI Enzymes that do not cut: AatII AceIII AflII AhdI ApaLI AscI AvrII Bce83I BclI BglII BplI Bpu10I Bpu1102I BsaI BsaBI BsaXI BsbI BsgI BsiWI BsmBI BspEI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I BstEII BstXI ClaI DraI DraIII DrdI DrdII EciI Eco47III EcoNI EcoRV FseI HgiEII HindIII HpaI MfeI MscI NarI NcoI NdeI NgoAIV NheI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I RcaI RsrII SalI SanDI SapI SexAI SfiI SgfI SgrAI SnaBI SphI SrfI Sse8387I Sse8647I StuI SwaI Tth111I XmnI