(Linear) MAP of: ./Fgr-C_02_A21_T3.seq check: 4609 from: 1 to: 951 Fgr-C_02_A21_T3 951 9 703 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI | | | | | | | | | | | | GGGCAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGTTGGTATCTACTACAACCAC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCGTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCAACCATAGATGATGTTGGTG a G Q K L E L P A V A A A L E L V D P P G C R N S A R G W Y L L Q P R - b G K S W S S P R W R P L * N * W I P R A A G I R H E V G I Y Y N H - c A K A G A P R G G G R S R T S G S P G L Q E F G T R L V S T T T T - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P L L Q L E G R H R G S * F * H I G R A A P I R C S T P I * * L W - e C F S S S G A T A A A R S S T S G G P Q L F E A R P Q Y R S C G - f A F A P A G R P P P R E L V L P D G P S C S N P V L N T D V V V V - BseRI KpnI BspGI Pfl1108I AceIII Bpu10I BstEII | | | | | | GGCCAGTGCTGCTGTGCTGGTACCCGTATCTTTGTCCAGGAGTCCATCTACGACAAGTTCCTCGCTGCCTTCAAGAAGCGAGCTGAGGAGAACAAGGTCG 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CCGGTCACGACGACACGACCATGGGCATAGAAACAGGTCCTCAGGTAGATGCTGTTCAAGGAGCGACGGAAGTTCTTCGCTCGACTCCTCTTGTTCCAGC a P V L L C W Y P Y L C P G V H L R Q V P R C L Q E A S * G E Q G R - b G Q C C C A G T R I F V Q E S I Y D K F L A A F K K R A E E N K V G - c A S A A V L V P V S L S R S P S T T S S S L P S R S E L R R T R S - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d P W H Q Q A P V R I K T W S D M * S L N R A A K L F R A S S F L T - e R G T S S H Q Y G Y R Q G P T W R R C T G R Q R * S A L Q P S C P R - f A L A A T S T G T D K D L L G D V V L E E S G E L L S S L L V L D - BpmI BseRI | SanDI | BsaI HgiEII | | BsaI AceIII | | | | | | GTGACCCCTTCAACGAGGAGACCTTCCAGGGTCCCCAGGTCTCTCAGCTCCAGTACGACCGTATCATGGGCTACATCAAGGCCGGTAAGGACGAGGGTGC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CACTGGGGAAGTTGCTCCTCTGGAAGGTCCCAGGGGTCCAGAGAGTCGAGGTCATGCTGGCATAGTACCCGATGTAGTTCCGGCCATTCCTGCTCCCACG a * P L Q R G D L P G S P G L S A P V R P Y H G L H Q G R * G R G C - b D P F N E E T F Q G P Q V S Q L Q Y D R I M G Y I K A G K D E G A - c V T P S T R R P S R V P R S L S S S T T V S W A T S R P V R T R V P - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d P S G K L S S V K W P G W T E * S W Y S R I M P * M L A P L S S P A - e H G R * R P S R G P D G P R E A G T R G Y * P S C * P R Y P R P H - f T V G E V L L G E L T G L D R L E L V V T D H A V D L G T L V L T - BsmBI EciI | | CACCGTCGAGATCGGTGGTGAGCGTCTCGGTGACAAGGGTTACTTCATCAAGCCCACCATCTTCTCCAACGTCCGCCCCGACATGAAGATCATGCAGGAG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 GTGGCAGCTCTAGCCACCACTCGCAGAGCCACTGTTCCCAATGAAGTAGTTCGGGTGGTAGAAGAGGTTGCAGGCGGGGCTGTACTTCTAGTACGTCCTC a H R R D R W * A S R * Q G L L H Q A H H L L Q R P P R H E D H A G G - b T V E I G G E R L G D K G Y F I K P T I F S N V R P D M K I M Q E - c P S R S V V S V S V T R V T S S S P P S S P T S A P T * R S C R R - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d V T S I P P S R R P S L P * K M L G V M K E L T R G S M F I M C S - e W R R S R H H A D R H C P N S * * A W W R R W R G G R C S S * A P - f G G D L D T T L T E T V L T V E D L G G D E G V D A G V H L D H L L - BseRI Bpu10I HgiEII BsaI | | | | GAGATTTTCGGCCCCGTCTGCGCTATTTCCAAGTTCAAGGACGAGGCTGAGGTCATTGACCTTGCCCACGACACCGCTTACGGTCTCGCTGCCGCTGTCC 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CTCTAAAAGCCGGGGCAGACGCGATAAAGGTTCAAGTTCCTGCTCCGACTCCAGTAACTGGAACGGGTGCTGTGGCGAATGCCAGAGCGACGGCGACAGG a D F R P R L R Y F Q V Q G R G * G H * P C P R H R L R S R C R C P - b E I F G P V C A I S K F K D E A E V I D L A H D T A Y G L A A A V H - c R F S A P S A L F P S S R T R L R S L T L P T T P L T V S L P L S - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d S I K P G T Q A I E L N L S S A S T M S R A W S V A * P R A A A T - e P S K R G R R R * K W T * P R P Q P * Q G Q G R C R K R D R Q R Q G - f L N E A G D A S N G L E L V L S L D N V K G V V G S V T E S G S D - BsbI Bce83I | | ACACCAAGAACCTCAACACTGCCCTCCGCGTTTCCAACGCTCTCAAGGCCGGAACTGTCTGGGTGAACTGCTATAACATGCTACATCACCAGCTCCCATT 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TGTGGTTCTTGGAGTTGTGACGGGAGGCGCAAAGGTTGCGAGAGTTCCGGCCTTGACAGACCCACTTGACGATATTGTACGATGTAGTGGTCGAGGGTAA a H Q E P Q H C P P R F Q R S Q G R N C L G E L L * H A T S P A P I - b T K N L N T A L R V S N A L K A G T V W V N C Y N M L H H Q L P F - c T P R T S T L P S A F P T L S R P E L S G * T A I T C Y I T S S H S - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d W V L F R L V A R R T E L A R L A P V T Q T F Q * L M S C * W S G N - e C W S G * C Q G G R K W R E * P R F Q R P S S S Y C A V D G A G M - f V G L V E V S G E A N G V S E L G S S D P H V A I V H * M V L E W - AceIII | CGGAGGCTACAAGGAGAGTGGAATTGGACGAGAACTCGGCGAGGCAGCCCTCGCCAACTACACACAGAACAAGTCGGTTGCCATCAAGCTGTACTAAGCA 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 GCCTCCGATGTTCCTCTCACCTTAACCTGCTCTTGAGCCGCTCCGTCGGGAGCGGTTGATGTGTGTCTTGTTCAGCCAACGGTAGTTCGACATGATTCGT a R R L Q G E W N W T R T R R G S P R Q L H T E Q V G C H Q A V L S I - b G G Y K E S G I G R E L G E A A L A N Y T Q N K S V A I K L Y * A - c E A T R R V E L D E N S A R Q P S P T T H R T S R L P S S C T K H - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d P P * L S L P I P R S S P S A A R A L * V C F L D T A M L S Y * A - e R L S C P S H F Q V L V R R P L G R W S C V S C T P Q W * A T S L - f E S A V L L T S N S S F E A L C G E G V V C L V L R N G D L Q V L C - BclI BsmI | | TAGCAAAGCGAATTGGGGACTNTCCAAGGAAATATGGGCGGCGTTGTAACTGCATGATCAATTTTTATATGATTCCACTTTAGTTTTACGCATTCAATGA 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 ATCGTTTCGCTTAACCCCTGANAGGTTCCTTTATACCCGCCGCAACATTGACGTACTAGTTAAAAATATACTAAGGTGAAATCAAAATGCGTAAGTTACT a A K R I G D ? P R K Y G R R C N C M I N F Y M I P L * F Y A F N E - b * Q S E L G T ? Q G N M G G V V T A * S I F I * F H F S F T H S M K - c S K A N W G L S K E I W A A L * L H D Q F L Y D S T L V L R I Q * - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d Y C L S N P V ? W P F I P P T T V A H D I K I H N W K L K V C E I - e M A F R I P S ? G L F Y P R R Q L Q M I L K * I I G S * N * A N L S - f L L A F Q P S ? L S I H A A N Y S C S * N K Y S E V K T K R M * H - XhoI ApaI KpnI | | | AGAAATGTTNNNGAAAANAANNAAANNNAANNNNNNNNNCTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCC 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 TCTTTACAANNNCTTTTNTTNNTTTNNNTTNNNNNNNNNGAGCTCCCCCCCGGGCCATGGGTTAAGCGGGATATCACTCAGCATAATGTTAAGTGACCGG a E M ? ? K ? ? K ? ? ? ? ? S R G G P V P N S P Y S E S Y Y N S L A - b K C ? ? K ? ? ? ? ? ? ? ? R G G A R Y P I R P I V S R I T I H W P - c R N V ? E ? ? ? ? ? ? ? ? L E G G P G T Q F A L * * V V L Q F T G R - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d F F H ? ? F ? ? F ? ? ? ? ? R P P A R Y G I R G I T L R I V I * Q G - e S I N ? F ? ? ? ? ? ? ? ? E L P P G T G L E G * L S D Y * L E S A - f L F T ? S F ? ? ? ? ? ? ? ? S P P G P V W N A R Y H T T N C N V P - GTCGTTTTACAACGTCGGGACTTGGAAAAACCTGGCGTTACCAAACTAATA 901 ---------+---------+---------+---------+---------+- 951 CAGCAAAATGTTGCAGCCCTGAACCTTTTTGGACCGCAATGGTTTGATTAT a V V L Q R R D L E K P G V T K L I - b S F Y N V G T W K N L A L P N * - c R F T T S G L G K T W R Y Q T N - 901 ---------+---------+---------+---------+---------+- 951 d D N * L T P V Q F F R A N G F * Y - e T T K C R R S K S F G P T V L S I - f R R K V V D P S P F V Q R * W V L - Enzymes that do cut: AceIII ApaI BamHI Bce83I BclI BpmI Bpu10I BsaI BsbI BseRI BsmI BsmBI BspGI BsrBI BssSI BstEII EagI EciI EcoRI HgiEII KpnI NotI Pfl1108I PstI SacI SacII SanDI SmaI SpeI XbaI XhoI Enzymes that do not cut: AatII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI BcgI BfiI BglI BglII BplI Bpu1102I BsaBI BsaXI BsgI BsiWI BspEI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI Eco47III Eco57I EcoNI EcoRV FseI FspI HindIII HpaI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SalI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XcmI XmnI