(Linear) MAP of: ./Fgr-C_02_A22_T3.seq check: 3187 from: 1 to: 955 Fgr-C_02_A22_T3 955 9 707 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI StuI NarI | | | | | | | | | | | | | | GGGCAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCCTTGGCGCCACCATCATCC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCGTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCGGAACCGCGGTGGTAGTAGG a G Q K L E L P A V A A A L E L V D P P G C R N S A R G L G A T I I R - b G K S W S S P R W R P L * N * W I P R A A G I R H E A L A P P S S - c A K A G A P R G G G R S R T S G S P G L Q E F G T R P W R H H H P - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d A F A P A G R P P P R E L V L P D G P S C S N P V L G Q R W W * G - e P L L Q L E G R H R G S * F * H I G R A A P I R C S A K A G G D D - f C F S S S G A T A A A R S S T S G G P Q L F E A R P R P A V M M - BsmBI BsbI AatII | | | | GTACCCCTACACAGGCTGCTTGGGACGCCCCCGAGTCTCACATCGGTGTTGCTCGACGTCTCGAAAAGGAGCTTCCCAACGCCCACATCCTCGACCAGTA 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 CATGGGGATGTGTCCGACGAACCCTGCGGGGGCTCAGAGTGTAGCCACAACGAGCTGCAGAGCTTTTCCTCGAAGGGTTGCGGGTGTAGGAGCTGGTCAT a T P T Q A A W D A P E S H I G V A R R L E K E L P N A H I L D Q Y - b V P L H R L L G T P P S L T S V L L D V S K R S F P T P T S S T S T - c Y P Y T G C L G R P R V S H R C C S T S R K G A S Q R P H P R P V - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d Y G * V P Q K P R G R T E C R H Q E V D R F P A E W R G C G R G T - e T G R C L S S P V G G L R V D T N S S T E F L L K G V G V D E V L - f R V G V C A A Q S A G S D * M P T A R R R S F S S G L A W M R S W Y - KpnI BglII | | CAGCAACAAGGACAACCCCAACGCCCATGAGTTCGGTACCGCCCAGGAGATCTGGGAGCAGACTGGTGGTAAAATCACTGCTCTCGTTGCTGGCGCTGGT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GTCGTTGTTCCTGTTGGGGTTGCGGGTACTCAAGCCATGGCGGGTCCTCTAGACCCTCGTCTGACCACCATTTTAGTGACGAGAGCAACGACCGCGACCA a S N K D N P N A H E F G T A Q E I W E Q T G G K I T A L V A G A G - b A T R T T P T P M S S V P P R R S G S R L V V K S L L S L L A L V - c Q Q Q G Q P Q R P * V R Y R P G D L G A D W W * N H C S R C W R W Y - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d C C C P C G W R G H T R Y R G P S R P A S Q H Y F * Q E R Q Q R Q - e V A V L V V G V G M L E T G G L L D P L L S T T F D S S E N S A S T - f L L L S L G L A W S N P V A W S I Q S C V P P L I V A R T A P A P - Bce83I HgiEII | KpnI | | BsaI NcoI | | | | | ACTGGTGGTACCATCACTGGTATTGCTCGCGGTCTCAAGAAGCACAACCAGGACATCAAGGTTATCGCTGCCGATCCCCATGGCAGTATCCTTGCTCTGC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TGACCACCATGGTAGTGACCATAACGAGCGCCAGAGTTCTTCGTGTTGGTCCTGTAGTTCCAATAGCGACGGCTAGGGGTACCGTCATAGGAACGAGACG a T G G T I T G I A R G L K K H N Q D I K V I A A D P H G S I L A L P - b L V V P S L V L L A V S R S T T R T S R L S L P I P M A V S L L C - c W W Y H H W Y C S R S Q E A Q P G H Q G Y R C R S P W Q Y P C S A - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d Y Q H Y W * Q Y Q E R D * S A C G P C * P * R Q R D G H C Y G Q E A - e S T T G D S T N S A T E L L V V L V D L N D S G I G M A T D K S Q - f V P P V M V P I A R P R L F C L W S M L T I A A S G W P L I R A R - Bpu10I SacI DrdII SalI | | | | CTGAGCTCCTGAACCAAGAGCACATCAACGAAGGTTACAAGGTGGAGGGTATTGGATACGACTTTATCCCCGATGTCCTCGACCAGCACATCGTCGACAA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 GACTCGAGGACTTGGTTCTCGTGTAGTTGCTTCCAATGTTCCACCTCCCATAACCTATGCTGAAATAGGGGCTACAGGAGCTGGTCGTGTAGCAGCTGTT a E L L N Q E H I N E G Y K V E G I G Y D F I P D V L D Q H I V D K - b L S S * T K S T S T K V T R W R V L D T T L S P M S S T S T S S T S - c * A P E P R A H Q R R L Q G G G Y W I R L Y P R C P R P A H R R Q - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d Q A G S G L A C * R L N C P P P Y Q I R S * G R H G R G A C R R C - e R L E Q V L L V D V F T V L H L T N S V V K D G I D E V L V D D V - f G S S R F W S C M L S P * L T S P I P Y S K I G S T R S W C M T S L - NcoI AceIII | EciI | AhdI BbsI BseRI DrdII | | | | | | | | GTGGTACAAGACCGATGACCGAGAGTCCTTCCACCTTGCTCGCCGACTCATTTCCGAGGAGGGTCTTCTCGTCGGTGGCAGCTCTGGTTCCGCCATGGCT 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CACCATGTTCTGGCTACTGGCTCTCAGGAAGGTGGAACGAGCGGCTGAGTAAAGGCTCCTCCCAGAAGAGCAGCCACCGTCGAGACCAAGGCGGTACCGA a W Y K T D D R E S F H L A R R L I S E E G L L V G G S S G S A M A - b G T R P M T E S P S T L L A D S F P R R V F S S V A A L V P P W L - c V V Q D R * P R V L P P C S P T H F R G G S S R R W Q L W F R H G C - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d T T C S R H G L T R G G Q E G V * K R P P D E R R H C S Q N R W P - e L P V L G I V S L G E V K S A S E N G L L T K E D T A A R T G G H S - f H Y L V S S R S D K W R A R R S M E S S P R R T P P L E P E A M A - GCTATGCTTCTCGCCGTCAAGGAGTACGGTTTCAAGAAGGGTGATGTCGTCGTTGTTGTCCTGCCCGACAGCATCCGAAGCTACCTCTCCAAGTTTGCCG 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 CGATACGAAGAGCGGCAGTTCCTCATGCCAAAGTTCTTCCCACTACAGCAGCAACAACAGGACGGGCTGTCGTAGGCTTCGATGGAGAGGTTCAAACGGC a A M L L A V K E Y G F K K G D V V V V V L P D S I R S Y L S K F A D - b L C F S P S R S T V S R R V M S S L L S C P T A S E A T S P S L P - c Y A S R R Q G V R F Q E G * C R R C C P A R Q H P K L P L Q V C R - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d Q * A E R R * P T R N * S P H H R R Q Q G A R C C G F S G R W T Q R - e S H K E G D L L V T E L L T I D D N N D Q G V A D S A V E G L K G - f A I S R A T L S Y P K L F P S T T T T T R G S L M R L * R E L N A - Pfl1108I NarI | | ATGACGACTGGCTCGCCGCCAACAACCTNCTCCCCGTCAACGGAGTCGAGTCCACCGTCAACGGCAACGGCGACAAGAAGAACTCTGACCCCTACGAGGG 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 TACTGCTGACCGAGCGGCGGTTGTTGGANGAGGGGCAGTTGCCTCAGCTCAGGTGGCAGTTGCCGTTGCCGCTGTTCTTCTTGAGACTGGGGATGCTCCC a D D W L A A N N L L P V N G V E S T V N G N G D K K N S D P Y E G - b M T T G S P P T T ? S P S T E S S P P S T A T A T R R T L T P T R A - c * R L A R R Q Q P ? P R Q R S R V H R Q R Q R R Q E E L * P L R G - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d H R S A R R W C G ? G R * R L R T W R * R C R R C S S S Q G R R P - e I V V P E G G V V ? E G D V S D L G G D V A V A V L L V R V G V L - f S S S Q S A A L L R ? G T L P T S D V T L P L P S L F F E S G * S P - Bce83I BsaI BsrDI | BspMI | | | | | CGCCACCATTGCTGCTCTGCGCCTCAAGCCCGTCACATCCGTCGGTGCCACCTTCACCTGCTCCGAGGCCATCGAGACCATGCGCGACAAGGGTTTCGAC 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 GCGGTGGTAACGACGAGACGCGGAGTTCGGGCAGTGTAGGCAGCCACGGTGGAAGTGGACGAGGCTCCGGTAGCTCTGGTACGCGCTGTTCCCAAAGCTG a A T I A A L R L K P V T S V G A T F T C S E A I E T M R D K G F D - b P P L L L C A S S P S H P S V P P S P A P R P S R P C A T R V S T - c R H H C C S A P Q A R H I R R C H L H L L R G H R D H A R Q G F R P - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d R W W Q Q E A G * A R * M R R H W R * R S R P W R S W A R C P N R - e A G G N S S Q A E L G D C G D T G G E G A G L G D L G H A V L T E V - f A V M A A R R R L G T V D T P A V K V Q E S A M S V M R S L P K S - AceIII DrdII KpnI | | | CAGCTCCCCGTCCTCTCCGNCAGCGGAACCAAGCTCGGCGGTCTTGGTACCCTCA 901 ---------+---------+---------+---------+---------+----- 955 GTCGAGGGGCAGGAGAGGCNGTCGCCTTGGTTCGAGCCGCCAGAACCATGGGAGT a Q L P V L S ? S G T K L G G L G T L - b S S P S S P ? A E P S S A V L V P S - c A P R P L R Q R N Q A R R S W Y P - 901 ---------+---------+---------+---------+---------+----- 955 d G A G R G R R ? R F W A R R D Q Y G * - e L E G D E G ? A S G L E A T K T G E - f W S G T R E ? L P V L S P P R P V R - Enzymes that do cut: AatII AceIII AhdI BamHI BbsI Bce83I BglII BpmI Bpu10I BsaI BsbI BseRI BsmBI BspMI BsrBI BsrDI BssSI DrdII EagI EciI EcoRI HgiEII KpnI NarI NcoI NotI Pfl1108I PstI SacI SacII SalI SmaI SpeI StuI XbaI Enzymes that do not cut: AflII AlwNI ApaI ApaBI ApaLI AscI AvrII BcgI BclI BfiI BglI BplI Bpu1102I BsaBI BsaXI BsgI BsiWI BsmI BspEI BspGI BspLU11I BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraI DraIII DrdI EarI Eco47III Eco57I EcoNI EcoRV FseI FspI HindIII HpaI MfeI MluI MscI NdeI NgoAIV NheI NruI NsiI NspV PacI PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI PvuII RcaI RsrII SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI SrfI Sse8387I Sse8647I SspI SwaI Tth111I VspI XcmI XhoI XmnI