(Linear) MAP of: ./Fgr-C_02_A23_T3.seq check: 1852 from: 1 to: 772 Fgr-C_02_A23_T3 772 11 208 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | BamHI SmaI PstI | BssSI BplI | | | | | | | | | | | | NGGACATAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTCACTCACAAACACTTTC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 NCCTGTATTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGTCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCGAGTGAGTGTTTGTGAAAG a ? T * S W S S P R W R P L * N S G S P G L Q E F G T R L T H K H F Q - b G H K A G A P R G G G R S R T V D P P G C R N S A R G S L T N T F - c D I K L E L P A V A A A L E Q W I P R A A G I R H E A H S Q T L S - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d S M F S S S G A T A A A R S C H I G R A A P I R C S A * E C V S E - e P C L A P A G R P P P R E L V T S G G P Q L F E A R P E S V F V K - f V Y L Q L E G R H R G S * F L P D G P S C S N P V L S V * L C K - XcmI Bce83I | BsaI | | | AAACAAACCAACCCCCAAACAACCAACCACTATCACAATGGAGTCCCTCAAGCAAGGTGTCAACTACGTCGCTGAGACCGTTCAGCAGGCCGCCTCTGGT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TTTGTTTGGTTGGGGGTTTGTTGGTTGGTGATAGTGTTACCTCAGGGAGTTCGTTCCACAGTTGATGCAGCGACTCTGGCAAGTCGTCCGGCGGAGACCA a T N Q P P N N Q P L S Q W S P S S K V S T T S L R P F S R P P L V - b K Q T N P Q T T N H Y H N G V P Q A R C Q L R R * D R S A G R L W C - c N K P T P K Q P T T I T M E S L K Q G V N Y V A E T V Q Q A A S G - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d F L G V G L C G V V I V I S D R L C P T L * T A S V T * C A A E P - e L C V L G W V V L W * * L P T G * A L H * S R R Q S R E A P R R Q - f * V F W G G F L W G S D C H L G E L L T D V V D S L G N L L G G R T - SalI BsaI SphI PstI PshAI | | | | | | GCTTCCAAGGAGACCAACAANGCAGGGGTCGCCAAGGACAGCATGCCCCATCGCACCGTGCCTCGCTGCAGGACGCCTGTCGACAGCCGACAGAGAACAT 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 CGAAGGTTCCTCTGGTTGTTNCGTCCCCAGCGGTTCCTGTCGTACGGGGTAGCGTGGCACGGAGCGACGTCCTGCGGACAGCTGTCGGCTGTCTCTTGTA a L P R R P T ? Q G S P R T A C P I A P C L A A G R L S T A D R E H - b F Q G D Q Q ? R G R Q G Q H A P S H R A S L Q D A C R Q P T E N M - c A S K E T N ? A G V A K D S M P H R T V P R C R T P V D S R Q R T * - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d A E L S V L L A P T A L S L M G W R V T G R Q L V G T S L R C L V - e H K W P S W C ? L P R W P C C A G D C R A E S C S A Q R C G V S F M - f S G L L G V ? C P D G L V A H G M A G H R A A P R R D V A S L S C - BclI XmnI | | GAGGTANGGCGCGTCACAAGAGGCATCTAGTTGTCTTATCGAGAACACTGATCAGAAATACTTCTGAGACATGATCCAACGGCGTTAAAGGGATACGTTG 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 CTCCATNCCGCGCAGTGTTCTCCGTAGATCAACAGAATAGCTCTTGTGACTAGTCTTTATGAAGACTCTGTACTAGGTTGCCGCAATTTCCCTATGCAAC a E V ? R V T R G I * L S Y R E H * S E I L L R H D P T A L K G Y V G - b R ? G A S Q E A S S C L I E N T D Q K Y F * D M I Q R R * R D T L - c G ? A R H K R H L V V L S R T L I R N T S E T * S N G V K G I R W - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d H P ? A R * L L C R T T K D L V S I L F V E S V H D L P T L P I R Q - e L Y P A D C S A D L Q R I S F V S * F Y K Q S M I W R R * L S V N - f S T ? R T V L P M * N D * R S C Q D S I S R L C S G V A N F P Y T - SmaI SrfI PinAI ApaI| ApaI DraI | || | | GACTTCTAGCTGTTCCACCTACCTATCCACCGGTATTCCCCAAAAAAAAAAAAAACTCAGGGGGGCCCGGGCCCATTTCCCCTTGGGGACGGTTTAAATT 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 CTGAAGATCGACAAGGTGGATGGATAGGTGGCCATAAGGGGTTTTTTTTTTTTTTGAGTCCCCCCGGGCCCGGGTAAAGGGGAACCCCTGCCAAATTTAA a L L A V P P T Y P P V F P K K K K N S G G P G P I S P W G R F K F - b D F * L F H L P I H R Y S P K K K K T Q G G P G P F P L G D G L N S - c T S S C S T Y L S T G I P Q K K K K L R G A R A H F P L G T V * I - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d V E L Q E V * R D V P I G W F F F F S L P A R A W K G K P V T * I - e S K * S N W R G I W R Y E G F F F F V * P P G P G N G R P S P K F - f P S R A T G G V * G G T N G L F F F F E P P G P G M E G Q P R N L N - DraI SmaI | | CCGGGCCGGTTTTAAAAAGCGGGGGGGGAAAACCCGGGGTTCCCCACTTAAAGCGCGTGGAAAAAACCCTTTTTCACAAGGGGGGTATAAAAAAGACGCC 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 GGCCCGGCCAAAATTTTTCGCCCCCCCCTTTTGGGCCCCAAGGGGTGAATTTCGCGCACCTTTTTTGGGAAAAAGTGTTCCCCCCATATTTTTTCTGCGG a R A G F K K R G G K T R G S P L K A R G K N P F S Q G G Y K K D A - b G P V L K S G G G K P G V P H L K R V E K T L F H K G G I K K T P - c P G R F * K A G G E N P G F P T * S A W K K P F F T R G V * K R R P - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d G P R N * F A P P S F G P N G V * L A H F F G K K V L P T Y F L R - e E P G T K F L P P P F G P T G W K F R T S F V R K * L P P I F F V G - f R A P K L F R P P F V R P E G S L A R P F F G K E C P P Y L F S A - DraI | CCCATAGCCTTTTTCAAAAATGTGCCCCCCCTTTGGGGGGGGGGAGAATTAACCCCCTTTTTTTTTGAAAAAACCCCGAAATTTTTTTTTAAAACACTTT 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 GGGTATCGGAAAAAGTTTTTACACGGGGGGGAAACCCCCCCCCCTCTTAATTGGGGGAAAAAAAAACTTTTTTGGGGCTTTAAAAAAAAATTTTGTGAAA a P I A F F K N V P P L W G G G E L T P F F F E K T P K F F F K T L F - b P * P F S K M C P P F G G G E N * P P F F L K K P R N F F L K H F - c H S L F Q K C A P P L G G G R I N P L F F * K N P E I F F * N T F - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d G W L R K * F H A G G K P P P L I L G R K K Q F F G S I K K * F V K - e G Y G K E F I H G G K P P P S F * G G K K K F F G R F K K K F C K - f G M A K K L F T G G R Q P P P S N V G K K K S F V G F N K K L V S - DraI SmaI | | TTTTTTTCCACGGGGCGGGGGGGGGGAGAACCCTTTTTTTTTAAAAAAAAACCCCCCCGGGGGGGGGGGGGG 701 ---------+---------+---------+---------+---------+---------+---------+-- 772 AAAAAAAGGTGCCCCGCCCCCCCCCCTCTTGGGAAAAAAAAATTTTTTTTTGGGGGGGCCCCCCCCCCCCCC a F F H G A G G G R T L F F * K K T P P G G G G - b F F S T G R G G G E P F F F K K K P P R G G G G - c F F P R G G G G E N P F F L K K N P P G G G G - 701 ---------+---------+---------+---------+---------+---------+---------+-- 772 d K K G R P P P P S F G K K K F F F G G P P P P P - e K K E V P R P P P S G K K K L F F G G R P P P P - f K K K W P A P P P L V R K K * F F V G G P P P P - Enzymes that do cut: ApaI BamHI Bce83I BclI BplI BpmI BsaI BsrBI BssSI DraI EagI EcoRI NotI PinAI PshAI PstI SacI SacII SalI SmaI SphI SrfI XbaI XcmI XmnI Enzymes that do not cut: AatII AceIII AflII AhdI AlwNI ApaBI ApaLI AscI AvrII BbsI BcgI BfiI BglI BglII Bpu10I Bpu1102I BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I BstEII BstXI Bsu36I ClaI DraIII DrdI DrdII EarI EciI Eco47III Eco57I EcoNI EcoRV FseI FspI HgiEII HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PmeI PmlI Psp1406I PvuI PvuII RcaI RsrII SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SpeI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XhoI