(Linear) MAP of: ./Fgr-C_02_A24_T3.seq check: 8970 from: 1 to: 952 Fgr-C_02_A24_T3 952 20 731 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI BsaXI BseRI EarI | | | | | | | | | | | | | | | GGGCAAAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGAGCAACCGTCAAAATGGTCA 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 CCCGTTTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCTCGTTGGCAGTTTTACCAGT a G Q K L E L P A V A A A L E L V D P P G C R N S A R G A T V K M V K - b G K S W S S P R W R P L * N * W I P R A A G I R H E E Q P S K W S - c A K A G A P R G G G R S R T S G S P G L Q E F G T R S N R Q N G Q - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d A F A P A G R P P P R E L V L P D G P S C S N P V L L L R * F P * - e P L L Q L E G R H R G S * F * H I G R A A P I R C S S C G D F H D - f C F S S S G A T A A A R S S T S G G P Q L F E A R P A V T L I T - ApaBI EagI SacII AlwNI| NruI | | || | AGAAGAGAAAGAACAACGGCCGAAACAAGAAGGGCCGCGGCCACGTCAAGCCCATCCGATGCAGCAACTGCTCGCGATGCACCCCCAAGGATAAGGCCAT 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TCTTCTCTTTCTTGTTGCCGGCTTTGTTCTTCCCGGCGCCGGTGCAGTTCGGGTAGGCTACGTCGTTGACGAGCGCTACGTGGGGGTTCCTATTCCGGTA a K R K N N G R N K K G R G H V K P I R C S N C S R C T P K D K A I - b R R E R T T A E T R R A A A T S S P S D A A T A R D A P P R I R P S - c E E K E Q R P K Q E G P R P R Q A H P M Q Q L L A M H P Q G * G H - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d S S F S C R G F C S P G R G R * A W G I C C S S A I C G W P Y P W - e L L S L V V A S V L L A A A V D L G D S A A V A R S A G G L I L G - f L F L F F L P R F L F P R P W T L G M R H L L Q E R H V G L S L A M - XcmI BbsI | | CAAGAGATTCACCATCCGCAACATGGTTGAGTCTGCTGCTATCCGTGACATCTCCGATGCCTCCGTCTTCGCGGAGTACACCGTCCCCAAGATGTACCTG 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GTTCTCTAAGTGGTAGGCGTTGTACCAACTCAGACGACGATAGGCACTGTAGAGGCTACGGAGGCAGAAGCGCCTCATGTGGCAGGGGTTCTACATGGAC a K R F T I R N M V E S A A I R D I S D A S V F A E Y T V P K M Y L - b R D S P S A T W L S L L L S V T S P M P P S S R S T P S P R C T * - c Q E I H H P Q H G * V C C Y P * H L R C L R L R G V H R P Q D V P E - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d * S I * W G C C P Q T Q Q * G H C R R H R R R R P T C R G W S T G - e D L S E G D A V H N L R S S D T V D G I G G D E R L V G D G L H V Q - f L L N V M R L M T S D A A I R S M E S A E T K A S Y V T G L I Y R - ScaI BseRI PstI | Eco57I EagI BseRI | | | | | | | AAGCTGCAGTACTGTGTCTCTTGCGCCATCCACGGCAAGATTGTCCGTGTCCGATCCGTTGTCGGCCGACGCAACCGTGCCCCTCCTCCTCGCGTCCGCT 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TTCGACGTCATGACACAGAGAACGCGGTAGGTGCCGTTCTAACAGGCACAGGCTAGGCAACAGCCGGCTGCGTTGGCACGGGGAGGAGGAGCGCAGGCGA a K L Q Y C V S C A I H G K I V R V R S V V G R R N R A P P P R V R Y - b S C S T V S L A P S T A R L S V S D P L S A D A T V P L L L A S A - c A A V L C L L R H P R Q D C P C P I R C R P T Q P C P S S S R P L - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d S A A T S H R K R W G R C S Q G H G I R Q R G V C G H G E E E R G S - e L Q L V T D R A G D V A L N D T D S G N D A S A V T G R R R A D A - f F S C Y Q T E Q A M W P L I T R T R D T T P R R L R A G G G R T R - BglI Bsu36I | BcgI BcgI| | BsmI | || | | ACAACAAGGACGGCAAGAAGATCGTCCCTACTGCCCCTAAGGCTTAGATGGGTTGATACTTGGGATGGAGTCCGGTTATGATAGCAGCATTCAAAAAATG 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 TGTTGTTCCTGCCGTTCTTCTAGCAGGGATGACGGGGATTCCGAATCTACCCAACTATGAACCCTACCTCAGGCCAATACTATCGTCGTAAGTTTTTTAC a N K D G K K I V P T A P K A * M G * Y L G W S P V M I A A F K K W - b T T R T A R R S S L L P L R L R W V D T W D G V R L * * Q H S K N G - c Q Q G R Q E D R P Y C P * G L D G L I L G M E S G Y D S S I Q K M - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d C C P R C S S R G * Q G * P K S P N I S P I S D P * S L L M * F I - e V V L V A L L D D R S G R L S L H T S V Q S P T R N H Y C C E F F - f * L L S P L F I T G V A G L A * I P Q Y K P H L G T I I A A N L F H - XcmI BspGI MluI | | | GATGGGATGAATACCTTTGGGATTATGAGACTAAGAAATTCCAAAAATCAACTGGACGACGTTTGATGTCTACGCGTCTTTGACAAAAAAAAAAAAAAAA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 CTACCCTACTTATGGAAACCCTAATACTCTGATTCTTTAAGGTTTTTAGTTGACCTGCTGCAAACTACAGATGCGCAGAAACTGTTTTTTTTTTTTTTTT a M G * I P L G L * D * E I P K I N W T T F D V Y A S L T K K K K K - b W D E Y L W D Y E T K K F Q K S T G R R L M S T R L * Q K K K K K - c D G M N T F G I M R L R N S K N Q L D D V * C L R V F D K K K K K K - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d S P I F V K P I I L S L F E L F * S S S T Q H R R T K S L F F F F - e P H S S Y R Q S * S V L F N W F D V P R R K I D V R R Q C F F F F F - f I P H I G K P N H S * S I G F I L Q V V N S T * A D K V F F F F F - XhoI ApaI KpnI BfiI | | | | AAAAAAAAAACTCGAGGGGGGGCCCGGTACCCAATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAA 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 TTTTTTTTTTGAGCTCCCCCCCGGGCCATGGGTTAAGCGGGATATCACTCAGCATAATGTTAAGTGACCGGCAGCAAAATGTTGCAGCACTGACCCTTTT a K K K T R G G A R Y P I R P I V S R I T I H W P S F Y N V V T G K T - b K K K L E G G P G T Q F A L * * V V L Q F T G R R F T T S * L G K - c K K N S R G G P V P N S P Y S E S Y Y N S L A V V L Q R R D W E N - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d F F F F E L P P G T G L E G * L S D Y * L E S A T T K C R R S Q S F - e F F F S S P P G P V W N A R Y H T T N C N V P R R K V V D H S P F - f F F F V R P P A R Y G I R G I T L R I V I * Q G D N * L T T V P F - PvuII EarI PvuI FspI | | | | CCCTGGCGTTACCCAACTTAATCGCCTTGCAGCACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATCGCCCTTCCAACAGTTGC 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 GGGACCGCAATGGGTTGAATTAGCGGAACGTCGTGTAGGGGGAAAGCGGTCGACCGCATTATCGCTTCTCCGGGCGTGGCTAGCGGGAAGGTTGTCAACG a L A L P N L I A L Q H I P L S P A G V I A K R P A P I A L P T V A - b P W R Y P T * S P C S T S P F R Q L A * * R R G P H R S P F Q Q L R - c P G V T Q L N R L A A H P P F A S W R N S E E A R T D R P S N S C - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d G P T V W S L R R A A C G G K A L Q R L L S S A R V S R G E L L Q - e G Q R * G V * D G Q L V D G K R W S A Y Y R L P G C R D G K W C N - f V R A N G L K I A K C C M G R E G A P T I A F L G A G I A R G V T A - BglI AceIII | | GCAGCCTGAATGGCGAATGGCAAATTGTAAGCGTTATATTTTGTTAAATTCGCGTTAAATTTTTGTAATCAGCTCATTTTTTACCCATAGCCGAAATCGC 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 CGTCGGACTTACCGCTTACCGTTTAACATTCGCAATATAAAACAATTTAAGCGCAATTTAAAAACATTAGTCGAGTAAAAAATGGGTATCGGCTTTAGCG a Q P E W R M A N C K R Y I L L N S R * I F V I S S F F T H S R N R - b S L N G E W Q I V S V I F C * I R V K F L * S A H F L P I A E I A - c A A * M A N G K L * A L Y F V K F A L N F C N Q L I F Y P * P K S Q - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d A A Q I A F P L N Y A N Y K T L N A N F K Q L * S M K * G Y G F D - e R L R F P S H C I T L T I N Q * I R T L N K Y D A * K K G M A S I A - f C G S H R I A F Q L R * I K N F E R * I K T I L E N K V W L R F R - DraI HgiEII | | AAATCCCTTTAAATCAAAGAATAACCCAAAAGGGTGAGGGTGGTCCCTTTGA 901 ---------+---------+---------+---------+---------+-- 952 TTTAGGGAAATTTAGTTTCTTATTGGGTTTTCCCACTCCCACCAGGGAAACT a K S L * I K E * P K R V R V V P L - b N P F K S K N N P K G * G W S L * - c I P L N Q R I T Q K G E G G P F - 901 ---------+---------+---------+---------+---------+-- 952 d C I G K F * L I V W F P S P P G K S - e F G K L D F F L G F P H P H D R Q - f L D R * I L S Y G L L T L T T G K - Enzymes that do cut: AceIII AlwNI ApaI ApaBI BamHI BbsI BcgI BfiI BglI BpmI BsaXI BseRI BsmI BspGI BsrBI BssSI Bsu36I DraI EagI EarI Eco57I EcoRI FspI HgiEII KpnI MluI NotI NruI PstI PvuI PvuII SacI SacII ScaI SmaI SpeI XbaI XcmI XhoI Enzymes that do not cut: AatII AflII AhdI ApaLI AscI AvrII Bce83I BclI BglII BplI Bpu10I Bpu1102I BsaI BsaBI BsbI BsgI BsiWI BsmBI BspEI BspLU11I BspMI BsrDI BsrGI BssHII Bst1107I BstEII BstXI ClaI DraIII DrdI DrdII EciI Eco47III EcoNI EcoRV FseI HindIII HpaI MfeI MscI NarI NcoI NdeI NgoAIV NheI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I RcaI RsrII SalI SanDI SapI SexAI SfiI SgfI SgrAI SnaBI SphI SrfI Sse8387I Sse8647I SspI StuI SwaI Tth111I VspI XmnI