(Linear) MAP of: ./Fgr-C_02_B01_T3.seq check: 6885 from: 1 to: 926 Fgr-C_02_B01_T3 926 23 496 ABI Using Enzyme data from: /home/pmiguel/dat/enzyme.dat FileCheck: 3232 Restriction enzyme data file used by the programs MAP, MAPSORT and MAPPLOT. A complete format description of this file may be found in the Data Files manual. Only one enzyme per recognition specificity is used when the '*' is preSsed to select all default enzymes. In addition, enzymes that are commercially available but are not unique in . . . With 115 enzymes: * May 13, 2001 13:20 .. XbaI BsrBI | BpmI | | EagI | | | EcoRI BamHI SacI SacII NotI | | | SpeI BamHI SmaI PstI | BssSI | | | | | | | | | | | | | | AGGGGTATGAAGCTGGAGCTCCCCGCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGATCCAATCCTCACTCAC 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 TCCCCATACTTCGACCTCGAGGGGCGCCACCGCCGGCGAGATCTTGATCACCTAGGGGGCCCGACGTCCTTAAGCCGTGCTCCTAGGTTAGGAGTGAGTG a R G M K L E L P A V A A A L E L V D P P G C R N S A R G S N P H S Q - b G V * S W S S P R W R P L * N * W I P R A A G I R H E D P I L T H - c G Y E A G A P R G G G R S R T S G S P G L Q E F G T R I Q S S L T - 1 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 100 d P I F S S S G A T A A A R S S T S G G P Q L F E A R P D L G * E - e P Y S A P A G R P P P R E L V L P D G P S C S N P V L I W D E S V - f P T H L Q L E G R H R G S * F * H I G R A A P I R C S S G I R V * - XcmI Bce83I | BsaI | | | AAACACTTTCAAACAAACCAACCCCCAAACAACCAACCACTATCACAATGGAGTCCCTCAAGCAAGGTGTCAACTACGTCGCTGAGACCGTTCAGCAGGC 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 TTTGTGAAAGTTTGTTTGGTTGGGGGTTTGTTGGTTGGTGATAGTGTTACCTCAGGGAGTTCGTTCCACAGTTGATGCAGCGACTCTGGCAAGTCGTCCG a T L S N K P T P K Q P T T I T M E S L K Q G V N Y V A E T V Q Q A - b K H F Q T N Q P P N N Q P L S Q W S P S S K V S T T S L R P F S R P - c N T F K Q T N P Q T T N H Y H N G V P Q A R C Q L R R * D R S A G - 101 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 200 d C V S E F L G V G L C G V V I V I S D R L C P T L * T A S V T * C A - e F V K L C V L G W V V L W * * L P T G * A L H * S R R Q S R E A P - f L C K * V F W G G F L W G S D C H L G E L L T D V V D S L G N L L - BsaI BspMI BsrDI AhdI | | | | CGCCTCTGGTGCTTCCAAGGAGACCAACAAGCAGGTCGCCAAGGACAGCAATGCCCCCATCGGCACCCGTGCCTCCGCTGCCAAGGACGCCCTGTCCGAC 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 GCGGAGACCACGAAGGTTCCTCTGGTTGTTCGTCCAGCGGTTCCTGTCGTTACGGGGGTAGCCGTGGGCACGGAGGCGACGGTTCCTGCGGGACAGGCTG a A S G A S K E T N K Q V A K D S N A P I G T R A S A A K D A L S D - b P L V L P R R P T S R S P R T A M P P S A P V P P L P R T P C P T - c R L W C F Q G D Q Q A G R Q G Q Q C P H R H P C L R C Q G R P V R Q - 201 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 300 d A E P A E L S V L L C T A L S L L A G M P V R A E A A L S A R D S - e R R Q H K W P S W C A P R W P C C H G W R C G H R R Q W P R G T R - f G G R T S G L L G V L L D G L V A I G G D A G T G G S G L V G Q G V - HgiEII BbsI | | | AAGGCCGACGAGAAGACCCATGAGGGTAAGGCCAGCGTCCACAAGGAGGCCATCTAAGTTTGTCTTAATCGAAGAACGACATGATACAGAAATCACCTTC 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 TTCCGGCTGCTCTTCTGGGTACTCCCATTCCGGTCGCAGGTGTTCCTCCGGTAGATTCAAACAGAATTAGCTTCTTGCTGTACTATGTCTTTAGTGGAAG a K A D E K T H E G K A S V H K E A I * V C L N R R T T * Y R N H L L - b R P T R R P M R V R P A S T R R P S K F V L I E E R H D T E I T F - c G R R E D P * G * G Q R P Q G G H L S L S * S K N D M I Q K S P S - 301 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 400 d L A S S F V W S P L A L T W L S A M * T Q R L R L V V H Y L F * R - e C P R R S S G H P Y P W R G C P P W R L K D * D F F S M I C F D G E - f L G V L L G M L T L G A D V L L G D L N T K I S S R C S V S I V K - BbsI Eco57I Bst1107I | | | TGAAGACATGGATCGCAACGGCGTTGAAAGGGAATAGCGTTGGGACTACATAGGCTGTATACACCTACACCTAATACAAACAGTCAAATACCACAAAAAA 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 ACTTCTGTACCTAGCGTTGCCGCAACTTTCCCTTATCGCAACCCTGATGTATCCGACATATGTGGATGTGGATTATGTTTGTCAGTTTATGGTGTTTTTT a K T W I A T A L K G N S V G T T * A V Y T Y T * Y K Q S N T T K K - b * R H G S Q R R * K G I A L G L H R L Y T P T P N T N S Q I P Q K K - c E D M D R N G V E R E * R W D Y I G C I H L H L I Q T V K Y H K K - 401 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 500 d R F V H I A V A N F P F L T P V V Y A T Y V * V * Y L C D F V V F F - e S S M S R L P T S L S Y R Q S * M P Q I C R C R I C V T L Y W L F - f Q L C P D C R R Q F P I A N P S C L S Y V G V G L V F L * I G C F - XhoI ApaI | | AAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCCGGACCCAATTCGCCCTATAGGGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGGGA 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 TTTTTTTTTTTTTTTTTTTGAGCTCCCCCCCGGGGCCTGGGTTAAGCGGGATATCCCTCAGCATAATGTTAAGTGACCGGCAGCAAAATGTTGCAGCCCT a K K K K K K L E G G P R T Q F A L * G V V L Q F T G R R F T T S G - b K K K K K N S R G G P G P N S P Y R E S Y Y N S L A V V L Q R R D - c K K K K K K T R G G A P D P I R P I G S R I T I H W P S F Y N V G T - 501 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 600 d F F F F F F S S P P G R V W N A R Y P T T N C N V P R R K V V D P - e F F F F F F V R P P A G S G I R G I P L R I V I * Q G D N * L T P - f F F F F F F F E L P P G P G L E G * L S D Y * L E S A T T K C R R S - BfiI FspI PvuII ApaI | | | | CTGGGAAAACCCTGGCGTTCCCCAACTTAATCGCCCTTGCGCACATCCCCCTTTCGCCAGCTGGCGTAATTACCGAAAAGGGCCCCACCCGAACCCCCTT 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 GACCCTTTTGGGACCGCAAGGGGTTGAATTAGCGGGAACGCGTGTAGGGGGAAAGCGGTCGACCGCATTAATGGCTTTTCCCGGGGTGGGCTTGGGGGAA a L G K P W R S P T * S P L R T S P F R Q L A * L P K R A P P E P P F - b W E N P G V P Q L N R P C A H P P F A S W R N Y R K G P H P N P L - c G K T L A F P N L I A L A H I P L S P A G V I T E K G P T R T P F - 601 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 700 d S P F G Q R E G V * D G K R V D G K R W S A Y N G F L A G G S G G - e V P F V R A N G L K I A R A C M G R E G A P T I V S F P G V R V G K - f Q S F G P T G W S L R G Q A C G G K A L Q R L * R F P G W G F G R - SspI | TCCAAACATTGTCCCAACCCTTGATGGGGGAAGTGGCAAATTGTGAACCCGTAATATTTTGGTAAAATTCCCGGTTAAATTTTTGTTAAATAAACCTAAT 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 AGGTTTGTAACAGGGTTGGGAACTACCCCCTTCACCGTTTAACACTTGGGCATTATAAAACCATTTTAAGGGCCAATTTAAAAACAATTTATTTGGATTA a Q T L S Q P L M G E V A N C E P V I F W * N S R L N F C * I N L I - b S K H C P N P * W G K W Q I V N P * Y F G K I P G * I F V K * T * F - c P N I V P T L D G G S G K L * T R N I L V K F P V K F L L N K P N - 701 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 800 d K W V N D W G K I P S T A F Q S G T I N Q Y F E R N F K Q * I F R I - e G F M T G V R S P P L P L N H V R L I K T F N G T L N K N F L G L - f E L C Q G L G Q H P F H C I T F G Y Y K P L I G P * I K T L Y V * - BfiI | TTTTTTAACCATTAGGCGCAAAATCGGGAAAATCCCTTTTTAATTTCAAGGAATGGCCCCGGAAAGGGTTGGAGTGGTGTCGCCCAGTTGGGAACAAAGA 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 AAAAAATTGGTAATCCGCGTTTTAGCCCTTTTAGGGAAAAATTAAAGTTCCTTACCGGGGCCTTTCCCAACCTCACCACAGCGGGTCAACCCTTGTTTCT a F L T I R R K I G K I P F * F Q G M A P E R V G V V S P S W E Q R - b F * P L G A K S G K S L F N F K E W P R K G L E W C R P V G N K D - c F F N H * A Q N R E N P F L I S R N G P G K G W S G V A Q L G T K ? - 801 ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+ 900 d K K V M L R L I P F I G K * N * P I A G S L T P T T D G L Q S C L - e K K L W * A C F R S F G K K I E L F P G P F P Q L P T A W N P V F - f N K * G N P A F D P F D R K L K L S H G R F P N S H H R G T P F L S - TNCCCTTTATAAGAACCCGCGCCTCC 901 ---------+---------+------ 926 ANGGGAAATATTCTTGGGCGCGGAGG a ? P L * E P A P - b ? L Y K N P R L - c P F I R T R A S - 901 ---------+---------+------ 926 d ? G K Y S G A G G - e I G K I L V R A E - f ? R * L F G R R - Enzymes that do cut: AhdI ApaI BamHI BbsI Bce83I BfiI BpmI BsaI BspMI BsrBI BsrDI BssSI Bst1107I EagI Eco57I EcoRI FspI HgiEII NotI PstI PvuII SacI SacII SmaI SpeI SspI XbaI XcmI XhoI Enzymes that do not cut: AatII AceIII AflII AlwNI ApaBI ApaLI AscI AvrII BcgI BclI BglI BglII BplI Bpu10I Bpu1102I BsaBI BsaXI BsbI BseRI BsgI BsiWI BsmI BsmBI BspEI BspGI BspLU11I BsrGI BssHII BstEII BstXI Bsu36I ClaI DraI DraIII DrdI DrdII EarI EciI Eco47III EcoNI EcoRV FseI HindIII HpaI KpnI MfeI MluI MscI NarI NcoI NdeI NgoAIV NheI NruI NsiI NspV PacI Pfl1108I PflMI PinAI PmeI PmlI PshAI Psp1406I PvuI RcaI RsrII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI SrfI Sse8387I Sse8647I StuI SwaI Tth111I VspI XmnI