Score E
Sequences producing significant alignments: (bits) Value
pir||T40774 probable histone promoter control protein - fis... 38 0.018
dbj|BAB13413.1| (AB046807) KIAA1587 protein [Homo sapiens] 38 0.018
gb|AAF82145.1|AC034256_9 (AC034256) Strong similarity to an... 32 0.11
gb|AAF27128.1|AC018849_16 (AC018849) unknown protein; 52184... 32 0.15
pir||H71255 probable cell division protein - syphilis spiro... 33 0.34
ref|NP_032609.1| multiple endocrine neoplasia 1 [Mus muscul... 33 0.57
ref|NP_040853.1| DNA polymerase [Human adenovirus type 40] ... 33 0.57
gb|AAC50901.1| (U75308) TBP-associated factor [Homo sapiens] 32 0.75
emb|CAC36006.1| (AL137077) bA11M20.1 (TATA box binding prot... 32 0.75
ref|NP_003176.1| TATA box binding protein (TBP)-associated ... 32 0.75
ref|XP_012948.2| TATA box binding protein (TBP)-associated ... 32 0.75
sp|Q05623|MYPH_CHICK MYOSIN-BINDING PROTEIN H (MYBP-H) (H-P... 32 0.75
pir||A46611 myosin-binding protein H - chicken 32 0.75
gb|AAF49616.1| (AE003530) CG6498 gene product [Drosophila m... 32 0.75
gb|AAC33206.1|AAC33206 (AC003970) Unknown protein [Arabidop... 32 0.75
gb|AAF19004.1|AF151366_1 (AF151366) arginine/serine-rich pr... 32 0.75
ref|NP_066929.1| regulator of G-protein signalling 3 [Homo ... 32 0.98
pir||S52994 arabinogalactan-like protein - loblolly pine >g... 32 0.98
gb|AAA40972.1| (M84011) C/EBP-related protein 2 [Rattus nor... 32 1.3
sp|O88559|MEN1_MOUSE MENIN >gi|3309059|gb|AAC26001.1| (AF07... 32 1.3
ref|NP_077039.1| liver activating protein (LAP, also NF-IL... 32 1.3
gb|AAB21102.1| (S77528) rNFIL-6=C/EBP-related transcription... 32 1.3
emb|CAA43179.1| (X60769) SF-B (silencer factor B) [Rattus ... 32 1.3
gb|AAC32038.1| (U76298) uclacyanin I [Arabidopsis thaliana]... 32 1.3
ref|NP_039868.1| EBNA3B (EBNA4A) latent protein [Human herp... 32 1.3
ref|NP_034013.1| CCAAT/enhancer binding protein (C/EBP), be... 32 1.3
pir||A48018 mucin 7 precursor, salivary - human 31 1.7
ref|NP_042620.1| ORF 24 [Equine herpesvirus 2] >gi|1360787|... 31 1.7
ref|XP_010803.1| homeo box D12 [Homo sapiens] 31 1.7
pir||C71014 hypothetical protein PH1409 - Pyrococcus horiko... 31 1.7
gb|AAG31753.1|AF277000_1 (AF277000) SR-PSOX [Sus scrofa] 31 1.7
gb|AAB70454.1| (U62134) quaking protein homolog [Danio rerio] 31 1.7
ref|NP_004445.1| ets variant gene 5 (ets-related molecule) ... 31 1.7
pir||JC2217 major surface glycoprotein 5 - Pneumocystis car... 31 1.7
gb|AAF19547.1|AC007190_15 (AC007190) F23N19.12 [Arabidopsis... 31 1.7
gb|AAH05441.1|AAH05441 (BC005441) mucin 1, transmembrane [M... 31 1.7
ref|NP_067016.1| homeo box D12; Homeo box-D12 [Homo sapiens... 31 1.7
gb|AAF18983.1|AF204158_1 (AF204158) cell surface receptor T... 31 1.7
gb|AAA33784.1| (L20870) antigen [Pneumocystis carinii] 31 1.7
sp|O62732|SYN1_CANFA SYNAPSIN I >gi|2944066|gb|AAC05207.1| ... 31 2.2
gb|AAF48455.1| (AE003499) CG9198 gene product [Drosophila m... 31 2.2
gb|AAC61743.1| (AF090738) insulin receptor substrate-2 [Mus... 31 2.2
gb|AAF03693.1| (AF172095) unknown [Picea rubens] 31 2.2
sp|P81122|IRS2_MOUSE INSULIN RECEPTOR SUBSTRATE-2 (IRS-2) (... 31 2.2
sp|O14174|YE5A_SCHPO HYPOTHETICAL 54.0 KD PROTEIN C4D7.10C ... 31 2.2
sp|Q9R1E0|FXO1_MOUSE FORKHEAD PROTEIN O1A (FORKHEAD IN RHAB... 31 2.2
emb|CAB86873.1| (AJ252157) forkhead protein FKHR [Mus muscu... 31 2.2
ref|NP_004524.1| myosin-binding protein C, fast-type; fast-... 30 2.8
pir||T22510 hypothetical protein F52F12.2 - Caenorhabditis ... 30 2.8
emb|CAC08254.1| (AL392146) putative dehydrogenase (fragment... 30 2.8
emb|CAB65929.1| (AL136326) hypothetical protein L377.03 [Le... 30 2.8
gb|AAD43152.1|AC007504_7 (AC007504) Hypothetical Protein [A... 30 2.8
pir||S27921 nuclear antigen EBNA-3B - human herpesvirus 4 >... 30 2.8
ref|NP_003610.1| protease, serine, 12 (neurotrypsin, motops... 25 3.0
gb|AAH07761.1|AAH07761 (BC007761) protease, serine, 12 (neu... 25 3.2
gb|AAK38577.1|AF323636_1 (AF323636) preS1 [Hepatitis B virus] 30 3.7
emb|CAC18259.1| (AL451018) conserved hypothetical protein [... 30 3.7
gb|AAA69474.1| (U20589) envelope protein [Gibbon ape leukem... 30 3.7
ref|NP_004629.1| HLA-B associated transcript-2 [Homo sapien... 30 3.7
ref|XP_001999.3| L2DTL protein [Homo sapiens] 30 3.7
pir||S55059 fertilin alpha-I - crab-eating macaque >gi|7940... 30 3.7
gb|AAG10390.1| (AY007501) enabled-like protein [Hirudo medi... 30 3.7
gb|AAK20944.1|AF245479_1 (AF245479) Mlx interactor kappa; M... 30 3.7
pir||T16484 hypothetical protein F56D2.7 - Caenorhabditis e... 30 3.7
dbj|BAA24403.1| (AB008798) nuclear pore complex glycoprotei... 30 3.7
gb|AAK20940.1|AF245475_1 (AF245475) Mlx interactor zeta; Mi... 30 3.7
ref|NP_067430.1| WBSCR14 protein; putative hepatic transcri... 30 3.7
gb|AAK20943.1|AF245478_1 (AF245478) Mlx interactor iota; Mi... 30 3.7
gb|AAK20942.1|AF245477_1 (AF245477) Mlx interactor theta; M... 30 3.7
pir||A75399 hypothetical protein - Deinococcus radiodurans ... 30 3.7
pir||T43064 CED-6 protein - Caenorhabditis elegans >gi|3253... 30 3.7
dbj|BAB18005.1| (AB036916) LHBs [Hepatitis B virus] >gi|111... 30 3.7
gb|AAD42858.1|AF159693_1 (AF159693) serine/threonine kinase... 30 3.7
pir||T49996 AtAGP4 - Arabidopsis thaliana >gi|3883126|gb|AA... 30 3.7
pir||F70874 probable membrane protein - Mycobacterium tuber... 30 3.7
pir||T04249 hypothetical protein F20B18.50 - Arabidopsis th... 27 4.0
gb|AAF47944.1| (AE003482) CG13708 gene product [Drosophila ... 30 4.9
emb|CAB77331.1| (AL160331) putative integral membrane prote... 30 4.9
gb|AAA30762.1| (M27811) synapsin Ib [Bos taurus] 30 4.9
pir||F30411 synapsin Ib - bovine 30 4.9
dbj|BAA91586.1| (AK001261) unnamed protein product [Homo sa... 30 4.9
ref|NP_057232.1| somatostatin receptor-interacting protein ... 30 4.9
gb|AAF25626.1|AF184899_3 (AF184899) xylose isomerase [Strep... 30 4.9
pir||T04552 hypothetical protein F28J12.220 - Arabidopsis t... 30 4.9
gb|AAC61286.1| (AC005396) putative proline-rich protein [Ar... 30 4.9
pir||T28682 hypothetical protein - Streptomyces coelicolor ... 30 4.9
gb|AAC27546.1| (U93160) major membrane glycoprotein [Cercop... 30 4.9
gb|AAG40020.2|AF324669_1 (AF324669) At2g14890 [Arabidopsis ... 30 4.9
sp|P17599|SYN1_BOVIN SYNAPSIN I >gi|163713|gb|AAA30761.1| (... 30 4.9
pir||E30411 synapsin Ia - bovine 30 4.9
pir||S14982 glycine-rich protein (clone w10-1) - tomato (fr... 30 4.9
gb|AAA87847.1| (U37142) brevican core protein [Rattus norve... 30 4.9
gb|AAF35887.1|AF226728_1 (AF226728) somatostatin receptor-i... 30 4.9
pir||T29265 hypothetical protein C01G8.7 - Caenorhabditis e... 30 4.9
ref|NP_057532.1| L2DTL protein [Homo sapiens] >gi|7012714|g... 30 4.9
ref|NP_071723.1| myeloid/lymphoid or mixed-lineage leukemia... 30 4.9
dbj|BAA91355.1| (AK000742) unnamed protein product [Homo sa... 30 4.9
gb|AAB37646.2| (U80439) Hypothetical protein C01G8.9 [Caeno... 30 4.9
gb|AAG40286.1|AF312858_1 (AF312858) leukemia associated gen... 30 4.9
gb|AAF60775.1| (AC024811) contains similarity to Pfam famil... 30 4.9
pir||H72462 hypothetical protein APE2347 - Aeropyrum pernix... 30 4.9
ref|NP_052548.1| lipoprotein [Plasmid ColIb-P9] >gi|4512538... 30 4.9
dbj|BAB14703.1| (AK023853) unnamed protein product [Homo sa... 29 6.3
dbj|BAB17935.1| (AB036906) LHBs [Hepatitis B virus] >gi|111... 29 6.3
pir||T32783 hypothetical protein C50D2.4 - Caenorhabditis e... 29 6.3
ref|NP_067736.1| overlapping protein [chayote mosaic tymovi... 29 6.3
emb|CAA77176.1| (Y18448) Bassoon protein [Homo sapiens] 29 6.3
ref|XP_009251.2| adenomatous polyposis coli like [Homo sapi... 29 6.3
pir||T10586 small nuclear ribonucleoprotein-associated prot... 29 6.3
ref|XP_018229.1| similar to bassoon (presynaptic cytomatrix... 29 6.3
dbj|BAB31180.1| (AK018368) putative [Mus musculus] 29 6.3
ref|NP_055773.1| KIAA0915 protein [Homo sapiens] >gi|424031... 29 6.3
ref|NP_062737.1| Msx2 interacting nuclear target protein [M... 29 6.3
ref|NP_076283.1| ets-related transcription factor [Mus musc... 29 6.3
ref|NP_005874.1| adenomatous polyposis coli like [Homo sapi... 29 6.3
pir||S24169 mucin - rat 29 6.3
ref|NP_044530.1| RS1 [human herpesvirus 2] >gi|9629344|ref|... 29 6.3
ref|NP_003449.1| bassoon (presynaptic cytomatrix protein); ... 29 6.3
gb|AAB47475.1| (U55229) large S protein [Hepatitis B virus] 29 6.3
pir||T04455 hypothetical protein F4D11.90 - Arabidopsis tha... 29 6.3
dbj|BAB32786.1| (AB055980) Msx-2 interacting nuclear target... 29 6.3
gb|AAA33785.1| (L20871) Antigen [Pneumocystis carinii] 29 6.3
gb|AAG49720.1|AF223963_4 (AF223963) large S protein [Hepati... 29 6.3
dbj|BAB17963.1| (AB036910) LHBs [Hepatitis B virus] 29 6.3
pir||T45048 hypothetical protein Y39B6B.v [imported] - Caen... 29 6.3
dbj|BAB17998.1| (AB036915) LHBs [Hepatitis B virus] 29 6.3
dbj|BAB17928.1| (AB036905) LHBs [Hepatitis B virus] >gi|111... 29 6.3
sp|Q05496|VMSA_HPBVT MAJOR SURFACE ANTIGEN PRECURSOR >gi|47... 29 6.3
gb|AAG49734.1|AF223965_4 (AF223965) large S protein [Hepati... 29 6.3
gb|AAG49713.1|AF223962_4 (AF223962) large S protein [Hepati... 29 6.3
dbj|BAB17984.1| (AB036913) LHBs [Hepatitis B virus] 29 6.3
ref|NP_104883.1| unknown protein [Mesorhizobium loti] >gi|1... 29 6.3
emb|CAB94035.1| (AL358652) phosphatidylserine synthase [Lei... 29 6.3
emb|CAB76982.1| (AL159178) putative secreted protein [Strep... 29 6.3
gb|AAC35896.1| (AF043485) large S protein [Hepatitis B virus] 29 6.3
emb|CAA10317.1| (AJ131187) APC2 protein [Homo sapiens] 29 6.3
dbj|BAA77972.1| (AB027308) lipoprotein [Plasmid R64] 29 6.3
ref|XP_017866.1| hypothetical protein FLJ12529 [Homo sapiens] 27 7.2
ref|NP_079087.1| hypothetical protein FLJ12529 [Homo sapien... 27 7.2
gb|AAA93320.1| (U46069) fertilin alpha subunit [Oryctolagus... 29 8.3
ref|NP_055727.1| KIAA0940 protein [Homo sapiens] >gi|114318... 29 8.3
gb|AAH07171.1|AAH07171 (BC007171) Unknown (protein for MGC:... 29 8.3
dbj|BAB47485.1| (AB058759) KIAA1856 protein [Homo sapiens] 29 8.3
gb|AAD03033.1| (AF093569) unknown [Rattus norvegicus] 29 8.3
dbj|BAA95971.1| (AB040880) KIAA1447 protein [Homo sapiens] 29 8.3
gb|AAF57103.1| (AE003776) CG15551 gene product [Drosophila ... 29 8.3
gb|AAF57824.2| (AE003802) lack gene product [Drosophila mel... 29 8.3
ref|NP_032855.1| progesterone receptor [Mus musculus] >gi|1... 29 8.3
gb|AAC41931.1| (M58378) synapsin Ib [Homo sapiens] 29 8.3
gb|AAC96087.1| (AF055064) envelope protein [Simian sarcoma-... 29 8.3
emb|CAC19764.1| (AL512496) WD domain protein; conserved hyp... 29 8.3
pir||B35363 synapsin Ib - human 29 8.3
ref|XP_017709.1| similar to KIAA0737 gene product (H. sapie... 29 8.3
gb|AAF78235.1| (AF247039) 163R* [porcine adenovirus 3] 29 8.3
gb|AAC40458.1| (AF005733) glycoprotein precursor [Marburg v... 29 8.3
gb|AAG27458.1|AF305694_1 (AF305694) latent nuclear antigen ... 29 8.3
gb|AAF54188.2| (AE003677) CG7918 gene product [Drosophila m... 29 8.3
gb|AAB47476.1| (U55230) large S protein [Hepatitis B virus] 29 8.3
emb|CAC39212.1| (X84047) ALEX protein [Rattus norvegicus] 29 8.3
ref|NP_005925.1| myeloid/lymphoid or mixed-lineage leukemia... 29 8.3
ref|NP_008881.1| synapsin I [Homo sapiens] >gi|1711641|sp|P... 29 8.3
gb|AAF21125.1|AF216521_1 (AF216521) E3 ubiquitin ligase [Dr... 29 8.3
gb|AAG49727.1|AF223964_4 (AF223964) large S protein [Hepati... 29 8.3
gb|AAB49894.1| (U89744) putative cell surface antigen [Ratt... 29 8.3
pir||A35363 synapsin I splice form a - human 29 8.3
pir||T09593 CIC protein, cold-inducible - alfalfa >gi|50830... 29 8.3
emb|CAC01512.1| (AL158040) bA360G10.2 (KIAA0940 protein) [H... 29 8.3
gb|AAC77827.1| (AF082302) arabinogalactan-protein [Arabidop... 29 8.3
>pir||T40774 probable histone promoter control protein - fission yeast
(Schizosaccharomyces pombe)
emb|CAA17036.1| (AL021837) putative histone promoter control protein.
[Schizosaccharomyces pombe]
Length = 338
Score = 37.7 bits (86), Expect = 0.018
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 116 DQASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
+ SPP+ +PST + P SLP G+A ++ PT+Q SI + Q S V+ ++ P
Sbjct: 270 EHISPPSALTNPSTEELKPSTSLPIDQGNASVVSK-PTQQVSIVLSQNASLPVDEHQAEP 328
>dbj|BAB13413.1| (AB046807) KIAA1587 protein [Homo sapiens]
Length = 991
Score = 37.7 bits (86), Expect = 0.018
Identities = 32/79 (40%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Frame = +2
Query: 128 PPAQTLSPSTLQPP-----PRASLPRRSGDA------PAATEGPTRQTSIYIPQGQSGSV 274
PP + PST PP P SLP G+ P A EGP+ +G S SV
Sbjct: 175 PPTSSEEPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDEGPSTSV 234
Query: 275 -ETGRSSPVTGVSLEVREMLERSMSIRWDEG 364
T P T V L E L S+ DEG
Sbjct: 235 LPTPGEGPGTSVPLAATEGLSTSVQATPDEG 265
>gb|AAF82145.1|AC034256_9 (AC034256) Strong similarity to an unknown protein T21F11.18
gi|6730738 from Arabidopsis thaliana BAC T21F11
gb|AC018849 and contains multiple WD PF|00400 domains.
ESTs gb|Z34157, gb|AA006273, gb|AA605431, gb|W43588,
gb|W43605, gb|Z34559, gb|R90037, g>
Length = 1153
Score = 32.0 bits (71), Expect(2) = 0.11
Identities = 17/61 (27%), Positives = 27/61 (43%)
Frame = +2
Query: 128 PPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVTGV 307
PP +PS + P +P+ G P GP + T+ +P +G + + S P V
Sbjct: 206 PPNGARAPSPVNNPLLGGIPKAGGFPPLGAHGPFQPTASPVPTPLAGWMSSPSSVPHPAV 265
Query: 308 S 310
S
Sbjct: 266 S 266
Score = 21.9 bits (45), Expect(2) = 0.11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 28 NEGLHHNHLLRHSPRPSP 81
N+ L+ H L +PRP+P
Sbjct: 176 NQSLNWQHQLCKNPRPNP 193
>gb|AAF27128.1|AC018849_16 (AC018849) unknown protein; 52184-57536 [Arabidopsis thaliana]
Length = 1073
Score = 31.6 bits (70), Expect(2) = 0.15
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVTGVS 310
P +PS + P SLP+ G P GP + T +P +G + + S P VS
Sbjct: 207 PNDARAPSPVNNPLLGSLPKAEGFPPLGAHGPFQPTPSPVPTPLAGWMSSPSSVPHPAVS 266
Score = 21.9 bits (45), Expect(2) = 0.15
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 28 NEGLHHNHLLRHSPRPSP 81
N+ L+ H L +PRP+P
Sbjct: 176 NQSLNWQHQLCKNPRPNP 193
>pir||H71255 probable cell division protein - syphilis spirochete
gb|AAC26587.1| (AE001267) cell division protein, putative [Treponema pallidum]
Length = 799
Score = 33.5 bits (75), Expect = 0.34
Identities = 20/65 (30%), Positives = 27/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 116 DQASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIP-QGQSGSVETGRSS 292
D + PP+ P T+ PPP S P A+ P Q S +P QG +
Sbjct: 167 DPSFPPSTADHPDTVSPPPAPSCATADVQTPEASAPPEGQFSTEVPLQGGEFLISEAEVQ 226
Query: 293 PVTGVS 310
P T V+
Sbjct: 227 PATQVA 232
>ref|NP_032609.1| multiple endocrine neoplasia 1 [Mus musculus]
gb|AAC79938.1| (AF016398) menin [Mus musculus]
gb|AAC79939.1| (AF024513) menin [Mus musculus]
dbj|BAA74964.1| (AB023401) menin [Mus musculus]
gb|AAD37498.1|AF109389_1 (AF109389) menin [Mus musculus]
gb|AAD38333.1|AF109390_1 (AF109390) menin [Mus musculus]
gb|AAF01352.1|AF130368_1 (AF130368) MEN1 tumor suppressor [Mus musculus]
Length = 611
Score = 32.7 bits (73), Expect = 0.57
Identities = 16/54 (29%), Positives = 25/54 (45%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSS 292
P + P PP + +L + G +A GP R+TS +P G E G ++
Sbjct: 483 PRRESKPEEPPPPKKPALDKGPGSGQSAGSGPPRKTSGTVPGTTRGGQEVGNAA 536
>ref|NP_040853.1| DNA polymerase [Human adenovirus type 40]
sp|P48311|DPOL_ADE40 DNA POLYMERASE
gb|AAC13953.1| (L19443) DNA polymerase [Human adenovirus type 40]
Length = 1188
Score = 32.7 bits (73), Expect = 0.57
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVTGVS 310
PA+T S QPP R +G AP AT P R+ + P + +GR VS
Sbjct: 14 PAETHSGP--QPPRRRVRQSTAGAAPTATRAPRRRAATASPGEPPSTTASGRPPAANNVS 71
Query: 311 LEVREMLERSMSIRWDEGI 367
L L ++ +G+
Sbjct: 72 LTPNSRLRGTIVAPRGQGL 90
>gb|AAC50901.1| (U75308) TBP-associated factor [Homo sapiens]
Length = 947
Score = 32.3 bits (72), Expect = 0.75
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
AS PA T + + P + +LP +PAA P T +P+G +G+V S T
Sbjct: 225 ASGPASTAASMVIGPTMQGALP-----SPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPT 279
Query: 302 GVSLEVREML 331
+ +R L
Sbjct: 280 ATTSGIRATL 289
>emb|CAC36006.1| (AL137077) bA11M20.1 (TATA box binding protein (TBP)-associated
factor, RNA polymerase II, C1, 130kD) [Homo sapiens]
Length = 628
Score = 32.3 bits (72), Expect = 0.75
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
AS PA T + + P + +LP +PAA P T +P+G +G+V S T
Sbjct: 363 ASGPASTAASMVIGPTMQGALP-----SPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPT 417
Query: 302 GVSLEVREML 331
+ +R L
Sbjct: 418 ATTSGIRATL 427
>ref|NP_003176.1| TATA box binding protein (TBP)-associated factor, RNA polymerase
II, C1, 130kD [Homo sapiens]
sp|O00268|T2D3_HUMAN TRANSCRIPTION INITIATION FACTOR TFIID 135 KDA SUBUNIT (TAFII-135)
(TAFII135) (TAFII-130) (TAFII130)
emb|CAA72189.1| (Y11354) subunit of RNA polymerase II transcription factor TFIID
[Homo sapiens]
Length = 1083
Score = 32.3 bits (72), Expect = 0.75
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
AS PA T + + P + +LP +PAA P T +P+G +G+V S T
Sbjct: 361 ASGPASTAASMVIGPTMQGALP-----SPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPT 415
Query: 302 GVSLEVREML 331
+ +R L
Sbjct: 416 ATTSGIRATL 425
>ref|XP_012948.2| TATA box binding protein (TBP)-associated factor, RNA polymerase
II, C1, 130kD [Homo sapiens]
Length = 1085
Score = 32.3 bits (72), Expect = 0.75
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
AS PA T + + P + +LP +PAA P T +P+G +G+V S T
Sbjct: 363 ASGPASTAASMVIGPTMQGALP-----SPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPT 417
Query: 302 GVSLEVREML 331
+ +R L
Sbjct: 418 ATTSGIRATL 427
>sp|Q05623|MYPH_CHICK MYOSIN-BINDING PROTEIN H (MYBP-H) (H-PROTEIN) (86 KDA PROTEIN)
gb|AAA21418.1| (L05605) myosin binding protein-H [Gallus gallus]
Length = 537
Score = 32.3 bits (72), Expect = 0.75
Identities = 23/77 (29%), Positives = 33/77 (41%), Gaps = 3/77 (3%)
Frame = +2
Query: 125 SPPAQTLSPSTLQP--PPRASLPRRSGDA-PAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
+PPA P QP P P + +A PA EGP P + + P
Sbjct: 76 TPPAPEHPPDAEQPAAPAAEHAPTPTHEAAPAHEEGPPPAAPAEAPAPEPEPEKPKEEPP 135
Query: 296 VTGVSLEVREMLERSMSIRW 355
+SL V E+ E S+++ W
Sbjct: 136 SVPLSLAVEEVTENSVTLTW 155
>pir||A46611 myosin-binding protein H - chicken
Length = 537
Score = 32.3 bits (72), Expect = 0.75
Identities = 23/77 (29%), Positives = 33/77 (41%), Gaps = 3/77 (3%)
Frame = +2
Query: 125 SPPAQTLSPSTLQP--PPRASLPRRSGDA-PAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
+PPA P QP P P + +A PA EGP P + + P
Sbjct: 76 TPPAPEHPPDAEQPAAPAAEHAPTPTHEAAPAHEEGPPPAAPAEAPAPEPEPEKPKEEPP 135
Query: 296 VTGVSLEVREMLERSMSIRW 355
+SL V E+ E S+++ W
Sbjct: 136 SVPLSLAVEEVTENSVTLTW 155
>gb|AAF49616.1| (AE003530) CG6498 gene product [Drosophila melanogaster]
Length = 2139
Score = 32.3 bits (72), Expect = 0.75
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSG 268
P T PPP +SLP R+ + PAAT G T + +P+ +SG
Sbjct: 1186 PTSTDGAKPTGPPPLSSLPSRAQETPAATVGATSTGA--LPKLKSG 1229
>gb|AAC33206.1|AAC33206 (AC003970) Unknown protein [Arabidopsis thaliana]
Length = 213
Score = 32.3 bits (72), Expect = 0.75
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 128 PPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSV 274
PP T+ P TL PPP ++P + P T T + Y P SG+V
Sbjct: 67 PPVTTIPPPTLTPPPVITIPPPT-LTPPVTNPVTNPVTQYPPTQPSGTV 114
>gb|AAF19004.1|AF151366_1 (AF151366) arginine/serine-rich protein [Arabidopsis thaliana]
gb|AAG10821.1|AC011808_9 (AC011808) arginine/serine-rich protein [Arabidopsis thaliana]
Length = 414
Score = 32.3 bits (72), Expect = 0.75
Identities = 21/56 (37%), Positives = 28/56 (49%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSS 292
SPP P L+ PPR S RR +P G +R +SI +G+ + GRSS
Sbjct: 315 SPP-----PRRLRSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGRRGRSS 365
>ref|NP_066929.1| regulator of G-protein signalling 3 [Homo sapiens]
ref|XP_005324.2| regulator of G-protein signalling 3 [Homo sapiens]
sp|P49796|RGS3_HUMAN REGULATOR OF G-PROTEIN SIGNALING 3 (RGS3) (RGP3)
pir||S78089 G-protein signaling regulator RGS3 - human
gb|AAC50394.1| (U27655) RGP3 [Homo sapiens]
prf||2206475A G protein signaling regulator [Homo sapiens]
Length = 519
Score = 32.0 bits (71), Expect = 0.98
Identities = 27/76 (35%), Positives = 35/76 (45%), Gaps = 4/76 (5%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRR----SGDAPAATEGPTRQTSIYIPQGQSGSVETGR 286
Q PPAQ LSP P + LP + + D PA E PTR +P Q
Sbjct: 89 QEPPPAQDLSPCQDLPAGQEPLPHQDPLLTKDLPAIQESPTRD----LPPCQ-------- 136
Query: 287 SSPVTGVSLEVREMLERSMS 346
P + VSL + + E +MS
Sbjct: 137 DLPPSQVSLPAKALTEDTMS 156
>pir||S52994 arabinogalactan-like protein - loblolly pine
gb|AAA74419.1| (U09554) arabinogalactan-like protein [Pinus taeda]
Length = 168
Score = 32.0 bits (71), Expect = 0.98
Identities = 15/35 (42%), Positives = 19/35 (53%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP 226
A+PP T +P PPP +S P + PAAT P
Sbjct: 56 ATPPTTTATPPVSTPPPVSSPPPVTSPPPAATPPP 90
>gb|AAA40972.1| (M84011) C/EBP-related protein 2 [Rattus norvegicus]
Length = 276
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 15/57 (26%)
Frame = +2
Query: 134 AQTLSPSTLQPPPRASLP----------RRSGDAPAATEGPTRQTSIYI-----PQGQSG 268
A+ P+ PPP A+L +R+ DAPA G Y+ P G SG
Sbjct: 96 AKAAPPACFPPPPPAALKAEPGFEPADCKRADDAPAMAAGFPFALRAYLGYQATPSGSSG 155
Query: 269 SVETGRSSPVTG 304
S+ T SS G
Sbjct: 156 SLSTSSSSSPPG 167
>sp|O88559|MEN1_MOUSE MENIN
gb|AAC26001.1| (AF072755) MENIN [Mus musculus]
gb|AAC78843.1| (AF093756) menin [Mus musculus]
Length = 611
Score = 31.6 bits (70), Expect = 1.3
Identities = 16/54 (29%), Positives = 25/54 (45%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSS 292
P + P PP + +L + G +A GP R+TS +P G E G ++
Sbjct: 483 PRRESKPEEPPPPKKPALDKGPGSGQSAGLGPPRKTSGTVPGTTRGGQEVGNAA 536
>ref|NP_077039.1| liver activating protein (LAP, also NF-IL6, nuclear factor-IL6,
previously designated TCF5) [Rattus norvegicus]
sp|P21272|CEBB_RAT CCAAT/ENHANCER BINDING PROTEIN BETA (C/EBP BETA)
(INTERLEUKIN-6-DEPENDENT BINDING PROTEIN) (IL-6DBP)
(LIVER-ENRICHED TRANSCRIPTIONAL ACTIVATOR) (LAP)
(SILENCER FACTOR B) (SF-B) (C/EBP-RELATED PROTEIN 2)
pir||A35914 transcription factor LAP - rat
emb|CAA38443.1| (X54626) liver-enriched transcriptional activator [Rattus
norvegicus]
gb|AAA19669.1| (M57235) interleukin 6-dependent binding protein [Rattus
norvegicus]
Length = 297
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 15/57 (26%)
Frame = +2
Query: 134 AQTLSPSTLQPPPRASLP----------RRSGDAPAATEGPTRQTSIYI-----PQGQSG 268
A+ P+ PPP A+L +R+ DAPA G Y+ P G SG
Sbjct: 117 AKAAPPACFPPPPPAALKAEPGFEPADCKRADDAPAMAAGFPFALRAYLGYQATPSGSSG 176
Query: 269 SVETGRSSPVTG 304
S+ T SS G
Sbjct: 177 SLSTSSSSSPPG 188
>gb|AAB21102.1| (S77528) rNFIL-6=C/EBP-related transcription factor [rats, Peptide,
297 aa] [Rattus sp.]
Length = 297
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 15/57 (26%)
Frame = +2
Query: 134 AQTLSPSTLQPPPRASLP----------RRSGDAPAATEGPTRQTSIYI-----PQGQSG 268
A+ P+ PPP A+L +R+ DAPA G Y+ P G SG
Sbjct: 117 AKAAPPACFPPPPPAALKAEPGFEPADCKRADDAPAMAAGFPFALRAYLGYQATPSGSSG 176
Query: 269 SVETGRSSPVTG 304
S+ T SS G
Sbjct: 177 SLSTSSSSSPPG 188
>emb|CAA43179.1| (X60769) SF-B (silencer factor B) [Rattus norvegicus]
Length = 221
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 15/57 (26%)
Frame = +2
Query: 134 AQTLSPSTLQPPPRASLP----------RRSGDAPAATEGPTRQTSIYI-----PQGQSG 268
A+ P+ PPP A+L +R+ DAPA G Y+ P G SG
Sbjct: 41 AKAAPPACFPPPPPAALKAEPGFEPADCKRADDAPAMAAGFPFALRAYLGYQATPSGSSG 100
Query: 269 SVETGRSSPVTG 304
S+ T SS G
Sbjct: 101 SLSTSSSSSPPG 112
>gb|AAC32038.1| (U76298) uclacyanin I [Arabidopsis thaliana]
gb|AAC69948.1| (AC005700) putative uclacyanin I [Arabidopsis thaliana]
Length = 261
Score = 31.6 bits (70), Expect = 1.3
Identities = 19/58 (32%), Positives = 27/58 (45%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVTG 304
P LSPS+ P P +SLP +PA + TS+ + G GS + S+ G
Sbjct: 159 PVPVLSPSSSTPLPSSSLPLIPPLSPALSPATAAGTSLPLFPGSPGSSSSTTSTKTVG 216
>ref|NP_039868.1| EBNA3B (EBNA4A) latent protein [Human herpesvirus 4]
sp|P03203|EBN4_EBV EBNA-4 NUCLEAR PROTEIN (EBNA-3B)
pir||QQBE24 nuclear antigen EBNA-3B - human herpesvirus 4 (strain B95-8)
emb|CAA24858.1| (V01555) EBNA3B (EBNA4A) latent protein [Human herpesvirus 4]
Length = 938
Score = 31.6 bits (70), Expect = 1.3
Identities = 25/80 (31%), Positives = 36/80 (44%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVTGVS 310
P T P L P + +L APA +GPT+Q + Q +G V+ GR S
Sbjct: 741 PTPTPPPQVLPTPMQLALR-----APAGQQGPTKQ---ILRQLLTGGVKKGRP------S 786
Query: 311 LEVREMLERSMSIRWDEGIG 370
L+++ LER + W G
Sbjct: 787 LKLQAALERQAAAGWQPSPG 806
>ref|NP_034013.1| CCAAT/enhancer binding protein (C/EBP), beta [Mus musculus]
sp|P28033|CEBB_MOUSE CCAAT/ENHANCER BINDING PROTEIN BETA (C/EBP BETA)
(INTERLEUKIN-6-DEPENDENT BINDING PROTEIN) (IL-6DBP)
(LIVER-ENRICHED TRANSCRIPTIONAL ACTIVATOR) (LAP)
(AGP/EBP)
pir||A36366 enhancer-binding protein C/EBP beta - mouse
emb|CAA44484.1| (X62600) C/EBP beta [Mus musculus]
gb|AAA37192.1| (M61007) alpha-1-acid glycoprotein [Mus musculus]
Length = 296
Score = 31.6 bits (70), Expect = 1.3
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 15/57 (26%)
Frame = +2
Query: 134 AQTLSPSTLQPPPRASLP----------RRSGDAPAATEGPTRQTSIYI-----PQGQSG 268
A+ P+ PPP A+L +R+ DAPA G Y+ P G SG
Sbjct: 116 AKAAPPACFPPPPPAALKAEPGFEPADCKRADDAPAMAAGFPFALRAYLGYQATPSGSSG 175
Query: 269 SVETGRSSPVTG 304
S+ T SS G
Sbjct: 176 SLSTSSSSSPPG 187
>pir||A48018 mucin 7 precursor, salivary - human
Length = 377
Score = 31.2 bits (69), Expect = 1.7
Identities = 21/59 (35%), Positives = 26/59 (43%), Gaps = 2/59 (3%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPR--ASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPV 298
+P A TL PS+ PP A+ P S PA P Q + P + T SSP
Sbjct: 263 TPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAP------ITTPNSSPT 316
Query: 299 T 301
T
Sbjct: 317 T 317
>ref|NP_042620.1| ORF 24 [Equine herpesvirus 2]
pir||S55618 hypothetical protein 24 - equine herpesvirus 2
gb|AAC13811.1| (U20824) ORF 24 [Equine herpesvirus 2]
Length = 767
Score = 31.2 bits (69), Expect = 1.7
Identities = 20/36 (55%), Positives = 21/36 (57%)
Frame = -1
Query: 292 GRTPRLDGARLPLWNVYACLASRALRGGRGVPRSPG 185
GR P ARLP V A L R L GGRG+PR PG
Sbjct: 287 GRLPT--DARLP---VRAPLLPRGLPGGRGLPREPG 317
>ref|XP_010803.1| homeo box D12 [Homo sapiens]
Length = 246
Score = 31.2 bits (69), Expect = 1.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 206 PAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
P A +GP Q Y P+ +G E GR+ P
Sbjct: 88 PTAKDGPEEQAKFYAPEAAAGPEERGRTRP 117
>pir||C71014 hypothetical protein PH1409 - Pyrococcus horikoshii
dbj|BAA30515.1| (AP000006) 721aa long hypothetical protein [Pyrococcus horikoshii]
Length = 721
Score = 31.2 bits (69), Expect = 1.7
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPV 298
Q P QT SP+ Q P + P ++ +P T+ P T + + V+TG + V
Sbjct: 29 QTQSPTQTQSPTQTQSPTQTGSPTQT-QSPTQTQAPQGVTKAILELDKVTVVDTGTAIVV 87
Query: 299 TG 304
G
Sbjct: 88 VG 89
>gb|AAG31753.1|AF277000_1 (AF277000) SR-PSOX [Sus scrofa]
Length = 250
Score = 31.2 bits (69), Expect = 1.7
Identities = 24/72 (33%), Positives = 31/72 (42%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
+S PAQT PSTLQP + +LP EG IP ++ + G S
Sbjct: 129 SSTPAQTNLPSTLQPTQKPTLP----------EGMPSLAKKLIPTSETDTSTVGHS---L 175
Query: 302 GVSLEVREMLER 337
G E RE E+
Sbjct: 176 GAKSEARENQEQ 187
>gb|AAB70454.1| (U62134) quaking protein homolog [Danio rerio]
Length = 383
Score = 31.2 bits (69), Expect = 1.7
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPA--ATEGPTRQTSIYIPQGQSGSVET 280
A+PP Q L P+TL+PP A P + P AT P ++ P +G + T
Sbjct: 233 AAPPGQVLPPATLRPPTPAGTPIMNIIRPTQMATVLPNGTPTLVPPTPDAGIIYT 287
>ref|NP_004445.1| ets variant gene 5 (ets-related molecule) [Homo sapiens]
sp|P41161|ERM_HUMAN ETS-RELATED PROTEIN ERM (ETS TRANSLOCATION VARIANT 5)
pir||S43692 transcription factor erm - human
emb|CAA53778.1| (X76184) ets-related protein [Homo sapiens]
emb|CAA65246.1| (X96381) erm [Homo sapiens]
gb|AAH07333.1|AAH07333 (BC007333) ets variant gene 5 (ets-related molecule) [Homo sapiens]
Length = 510
Score = 31.2 bits (69), Expect = 1.7
Identities = 20/36 (55%), Positives = 25/36 (68%), Gaps = 3/36 (8%)
Frame = +2
Query: 125 SPPAQTLSPS---TLQPPPRASLPRRSGDAPAATEGPTR 232
+PP LSP+ L PPP+A+LP SG APAA GP +
Sbjct: 135 TPPTTPLSPTHQNPLFPPPQATLP-TSGHAPAA--GPVQ 170
>pir||JC2217 major surface glycoprotein 5 - Pneumocystis carinii
dbj|BAA04851.1| (D21827) major surface glycoprotein [Pneumocystis carinii]
prf||2012229A major surface glycoprotein:ISOTYPE=MSG5 [Pneumocystis carinii]
Length = 1076
Score = 31.2 bits (69), Expect = 1.7
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDA--PAATEGPTRQTSIYIPQGQSGS 271
A P AQ S STL PPP+ + SG PA P + + P G SG+
Sbjct: 798 AMPTAQNGSDSTLVPPPQQAPAGSSGSGSPPAVPPPPPQNGTPDTPDGTSGT 849
>gb|AAF19547.1|AC007190_15 (AC007190) F23N19.12 [Arabidopsis thaliana]
Length = 312
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSI 244
+SPP +LSPS+ PPP +S P S +++ + QT++
Sbjct: 105 SSPPPLSLSPSSPPPPPPSSSPLSSLSPSSSSSTYSNQTNL 145
Score = 30.8 bits (68), Expect = 2.2
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGS 271
+SPP +LSPS+ PPP +S P S + P+ S P S S
Sbjct: 56 SSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSPPSSSPSSAPPSSLSPS 105
>gb|AAH05441.1|AAH05441 (BC005441) mucin 1, transmembrane [Mus musculus]
Length = 631
Score = 31.2 bits (69), Expect = 1.7
Identities = 21/53 (39%), Positives = 24/53 (44%), Gaps = 4/53 (7%)
Frame = +2
Query: 140 TLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVET----GRSSPV 298
TLSP+T P S P S + AT P TS + G S T SSPV
Sbjct: 156 TLSPATSPPGDSTSSPDHSSTSSPATRAPEDSTSTAVLSGTSSPATTAPVDSTSSPV 212
>ref|NP_067016.1| homeo box D12; Homeo box-D12 [Homo sapiens]
sp|P35452|HXDC_HUMAN HOMEOBOX PROTEIN HOX-D12 (HOX-4H)
gb|AAF79044.1|AF154915_1 (AF154915) transcription factor HOXD12 [Homo sapiens]
Length = 275
Score = 31.2 bits (69), Expect = 1.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 206 PAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
P A +GP Q Y P+ +G E GR+ P
Sbjct: 84 PTAKDGPEEQAKFYAPEAAAGPEERGRTRP 113
>gb|AAF18983.1|AF204158_1 (AF204158) cell surface receptor TOLLO [Drosophila melanogaster]
gb|AAF49650.1| (AE003531) Tollo gene product [Drosophila melanogaster]
gb|AAF86224.1|AF247764_1 (AF247764) Toll-8 [Drosophila melanogaster]
Length = 1346
Score = 31.2 bits (69), Expect = 1.7
Identities = 12/38 (31%), Positives = 18/38 (46%)
Frame = +1
Query: 7 STHASDYNEGLHHNHLLRHSPRPSPPAITHHQTQYRRP 120
S H + HH+H + P P ++ HHQ Q+ P
Sbjct: 1224 SCHVPINHASYHHHHHVHQQAMPLPHSVHHHQQQFMLP 1261
>gb|AAA33784.1| (L20870) antigen [Pneumocystis carinii]
Length = 386
Score = 31.2 bits (69), Expect = 1.7
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDA--PAATEGPTRQTSIYIPQGQSGS 271
A P AQ S STL PPP+ + SG PA P + + P G SG+
Sbjct: 108 AMPTAQNGSDSTLVPPPQQAPAGSSGSGSPPAVPPPPPQNGTPDTPDGTSGT 159
>sp|O62732|SYN1_CANFA SYNAPSIN I
gb|AAC05207.1| (AF049588) synapsin I [Canis familiaris]
Length = 415
Score = 30.8 bits (68), Expect = 2.2
Identities = 24/59 (40%), Positives = 28/59 (46%), Gaps = 8/59 (13%)
Frame = +2
Query: 119 QASPPAQTLSPSTL-QPPPRASLPRRSGDA-------PAATEGPTRQTSIYIPQGQSGSV 274
QA PP T S Q PP+AS SG P GPTRQ S P ++G
Sbjct: 285 QAGPPQATRQTSVSGQAPPKASGAPPSGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPP 344
Query: 275 ETGRSSP 295
T + P
Sbjct: 345 TTQQPRP 351
>gb|AAF48455.1| (AE003499) CG9198 gene product [Drosophila melanogaster]
Length = 2030
Score = 30.8 bits (68), Expect = 2.2
Identities = 21/56 (37%), Positives = 23/56 (40%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSS 292
S P ++P T P P AS P A GP IP G S VE RSS
Sbjct: 545 SIPTPLVTPMTAAPSPSASPAPSHVKTPMAAAGPASG----IPSGSSSFVEVRRSS 596
>gb|AAC61743.1| (AF090738) insulin receptor substrate-2 [Mus musculus]
Length = 734
Score = 30.8 bits (68), Expect = 2.2
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 128 PPAQTLSPSTLQ---PPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSG 268
PP + SPS+LQ PP L R + A ++GPT +S+ G +G
Sbjct: 420 PPRPSTSPSSLQQPLPPAPGDLYRLPPASAATSQGPTAGSSMSSEPGDNG 469
>gb|AAF03693.1| (AF172095) unknown [Picea rubens]
Length = 165
Score = 30.8 bits (68), Expect = 2.2
Identities = 15/35 (42%), Positives = 18/35 (50%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP 226
A+PP T +P PPP AS P + P AT P
Sbjct: 50 AAPPTTTATPPVSTPPPVASPPPVATPPPVATPPP 84
>sp|P81122|IRS2_MOUSE INSULIN RECEPTOR SUBSTRATE-2 (IRS-2) (4PS)
gb|AAB35237.1| IRS-2, 4PS=insulin and cytokine signalling protein [mice, myeloid
progenitor cells, Peptide, 1321 aa]
Length = 1321
Score = 30.8 bits (68), Expect = 2.2
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 128 PPAQTLSPSTLQ---PPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSG 268
PP + SPS+LQ PP L R + A ++GPT +S+ G +G
Sbjct: 1010 PPRPSTSPSSLQQPLPPAPGDLYRLPPASAATSQGPTAGSSMSSEPGDNG 1059
>sp|O14174|YE5A_SCHPO HYPOTHETICAL 54.0 KD PROTEIN C4D7.10C IN CHROMOSOME I
pir||T38801 hypothetical protein SPAC4D7.10c - fission yeast
(Schizosaccharomyces pombe)
emb|CAB11282.1| (Z98602) hypothetical protein [Schizosaccharomyces pombe]
Length = 473
Score = 30.8 bits (68), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (54%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQG 259
+ +P Q L PS++Q PP + + +A A++E P T ++P G
Sbjct: 340 KTTPKIQRLPPSSIQIPPPKPMQKFPANA-ASSESPPNATGNFLPSG 385
>sp|Q9R1E0|FXO1_MOUSE FORKHEAD PROTEIN O1A (FORKHEAD IN RHABDOMYOSARCOMA)
gb|AAD40636.1|AF126056_1 (AF126056) forkhead protein FKHR [Mus musculus]
Length = 652
Score = 30.8 bits (68), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = -1
Query: 370 PNTLIPPYG----H*PLQHLPHLETHPGHWGRTPRLDGARLP 257
PN+++P YG H + + P THPGH +T ++G LP
Sbjct: 497 PNSVMPAYGSQASHNKMMN-PSSHTHPGHAQQTASVNGRTLP 537
>emb|CAB86873.1| (AJ252157) forkhead protein FKHR [Mus musculus]
Length = 652
Score = 30.8 bits (68), Expect = 2.2
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 4/38 (10%)
Frame = -1
Query: 370 PNTLIPPYG----H*PLQHLPHLETHPGHWGRTPRLDGARLP 257
PN+++P YG H + + P THPGH +T ++G LP
Sbjct: 497 PNSVMPAYGSQASHNKMMN-PSSHTHPGHAQQTASVNGRTLP 537
>ref|NP_004524.1| myosin-binding protein C, fast-type; fast-type muscle
myosin-binding-protein C [Homo sapiens]
sp|Q14324|MYPF_HUMAN MYOSIN-BINDING PROTEIN C, FAST-TYPE (FAST MYBP-C) (C-PROTEIN,
SKELETAL MUSCLE FAST-ISOFORM)
pir||S36845 myosin-binding protein C, fast-type muscle - human
emb|CAA51544.1| (X73113) fast MyBP-C [Homo sapiens]
Length = 1142
Score = 30.4 bits (67), Expect = 2.8
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 161 QPPPRASLPRRSGDAPAATEGPTRQ--TSIYIPQGQSGSVETGRSSPVTGVSLEVREMLE 334
+ PP+ + +AP + PT + T +++ + S SVETG+ + V + +E+ +
Sbjct: 24 EAPPKEAPAEAPKEAPPEDQSPTAEEPTGVFLKKPDSVSVETGKDAVVV-AKVNGKELPD 82
Query: 335 RSMSIRWDEG 364
+ +I+W +G
Sbjct: 83 KP-TIKWFKG 91
>pir||T22510 hypothetical protein F52F12.2 - Caenorhabditis elegans
emb|CAB05733.1| (Z83228) contains similarity to Pfam domain: PF01391 (Collagen
triple helix repeat (20 copies)), Score=79.6,
E-value=2e-20, N=2; PF01484 (Nematode cuticle collagen
N-terminal domain), Score=64.1, E-value=9.9e-16, N=1
[Caenorhabditis elegans]
Length = 370
Score = 30.4 bits (67), Expect = 2.8
Identities = 23/55 (41%), Positives = 29/55 (51%), Gaps = 4/55 (7%)
Frame = +2
Query: 128 PPAQTLS--PSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGS--VETGRSS 292
PP+ TLS P T+ P LP RS + E PTR+ +P S S ETG S+
Sbjct: 300 PPSTTLSSTPPTISPSAPTLLPTRS--PKSREETPTRREEQQVPPNPSSSEVPETGDSA 356
>emb|CAC08254.1| (AL392146) putative dehydrogenase (fragment) [Streptomyces
coelicolor A3(2)]
Length = 454
Score = 30.4 bits (67), Expect = 2.8
Identities = 19/60 (31%), Positives = 23/60 (37%), Gaps = 1/60 (1%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPT-RQTSIYIPQGQSGSVETGRSSPVT 301
+P A + T P PR S G A GP T+ GQ TG +P T
Sbjct: 263 APTATPTTAPTAGPAPRRSRSASQGSASQRAAGPADGPTTADTAAGQGDGTSTGTGAPAT 322
Query: 302 G 304
G
Sbjct: 323 G 323
>emb|CAB65929.1| (AL136326) hypothetical protein L377.03 [Leishmania major]
Length = 690
Score = 30.4 bits (67), Expect = 2.8
Identities = 12/28 (42%), Positives = 17/28 (59%)
Frame = +2
Query: 146 SPSTLQPPPRASLPRRSGDAPAATEGPT 229
+P LQPPP + LPRR+ +P + T
Sbjct: 34 TPQALQPPPPSRLPRRATSSPLTSPSTT 61
>gb|AAD43152.1|AC007504_7 (AC007504) Hypothetical Protein [Arabidopsis thaliana]
Length = 847
Score = 30.4 bits (67), Expect = 2.8
Identities = 18/57 (31%), Positives = 27/57 (46%), Gaps = 1/57 (1%)
Frame = +2
Query: 128 PPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQT-SIYIPQGQSGSVETGRSSPV 298
PP + P T PPP + + AP T+ PT + + +P S S ++ SPV
Sbjct: 627 PPVYSPPPPTFSPPPTHNTNQPPMGAPTPTQAPTPSSETTQVPTPSSESDQSQILSPV 684
>pir||S27921 nuclear antigen EBNA-3B - human herpesvirus 4
gb|AAA45894.1| (M34440) nuclear antigen EBNA-3B [Human herpesvirus 4]
Length = 946
Score = 30.4 bits (67), Expect = 2.8
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 146 SPSTLQPPPRA--SLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
+P+T+QPPPRA +P G A T + PQG +++ R +P
Sbjct: 698 APTTMQPPPRAPTPMPPPQGPPTAMQRPQGAPTPMPPPQGPPTAMQRPRGAP 749
>ref|NP_003610.1| protease, serine, 12 (neurotrypsin, motopsin) [Homo sapiens]
sp|P56730|NETR_HUMAN NEUROTRYPSIN PRECURSOR (MOTOPSIN)
emb|CAA04816.1| (AJ001531) neurotrypsin [Homo sapiens]
Length = 875
Score = 25.0 bits (53), Expect(2) = 3.0
Identities = 15/31 (48%), Positives = 18/31 (57%), Gaps = 4/31 (12%)
Frame = +1
Query: 28 NEGLHHNHLLRHSPRPSPPAITHH----QTQYRRP 120
N+ LHH+H R SPPA H+ TQ R P
Sbjct: 26 NDSLHHSH------RHSPPAGPHYPYYLPTQQRPP 54
Score = 23.9 bits (50), Expect(2) = 3.0
Identities = 11/27 (40%), Positives = 12/27 (43%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPA 211
P Q P+T PPP PR PA
Sbjct: 48 PTQQRPPTTRPPPPLPRFPRPPRALPA 74
>gb|AAH07761.1|AAH07761 (BC007761) protease, serine, 12 (neurotrypsin, motopsin) [Homo
sapiens]
Length = 505
Score = 25.0 bits (53), Expect(2) = 3.2
Identities = 15/31 (48%), Positives = 18/31 (57%), Gaps = 4/31 (12%)
Frame = +1
Query: 28 NEGLHHNHLLRHSPRPSPPAITHH----QTQYRRP 120
N+ LHH+H R SPPA H+ TQ R P
Sbjct: 26 NDSLHHSH------RHSPPAGPHYPYYLPTQQRPP 54
Score = 23.9 bits (50), Expect(2) = 3.2
Identities = 11/27 (40%), Positives = 12/27 (43%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPA 211
P Q P+T PPP PR PA
Sbjct: 48 PTQQRPPTTRPPPPLPRFPRPPRALPA 74
>gb|AAK38577.1|AF323636_1 (AF323636) preS1 [Hepatitis B virus]
Length = 336
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/63 (31%), Positives = 25/63 (38%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
+SP AQ + + PP AS R+SG P P R T Q S + P
Sbjct: 20 SSPQAQGMLKTLPADPPPASTNRQSGRQPTPITPPLRDTHPQAMQWNSTTFHQALQDPPA 79
Query: 302 GVS 310
G S
Sbjct: 80 GGS 82
>emb|CAC18259.1| (AL451018) conserved hypothetical protein [Neurospora crassa]
Length = 2084
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
ASP Q ST PPP+ +PR S +PA G + + G + + S+P T
Sbjct: 1926 ASPEDQAAKKST-PPPPKGGIPRSSASSPAPPMG------MGVGGGSAPNTPGRASAPPT 1978
Query: 302 G 304
G
Sbjct: 1979 G 1979
>gb|AAA69474.1| (U20589) envelope protein [Gibbon ape leukemia virus]
Length = 665
Score = 30.0 bits (66), Expect = 3.7
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRRSGDAP--------AATEGPTRQTSIYIPQG 259
+ PP++ L P + + PP + P SG AP +T PT +++ QG
Sbjct: 266 EQKPPSKPLPPPSREAPPTSLPPAASGQAPRVRERTVTLSTPPPTTGDRLFLVQG 320
>ref|NP_004629.1| HLA-B associated transcript-2 [Homo sapiens]
sp|P48634|BAT2_HUMAN LARGE PROLINE-RICH PROTEIN BAT2 (HLA-B-ASSOCIATED TRANSCRIPT 2)
pir||B35098 MHC class III histocompatibility antigen HLA-B-associated protein 2
[imported] - human
gb|AAA35585.1| (M33509) HLA-B-associated transcript 2 (BAT2) [Homo sapiens]
gb|AAA35586.1| (M33518) HLA-B-associated transcript 2 (BAT2) [Homo sapiens]
Length = 2142
Score = 30.0 bits (66), Expect = 3.7
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPV 298
+A P A +PST PPP + AP PT +T P+ + +S+P
Sbjct: 493 KAEPAAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETE---PE-EPAQAPPAQSTPT 548
Query: 299 TGVS 310
GV+
Sbjct: 549 PGVA 552
>ref|XP_001999.3| L2DTL protein [Homo sapiens]
Length = 434
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/75 (26%), Positives = 30/75 (39%), Gaps = 5/75 (6%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP-----TRQTSIYIPQGQSGSVETGR 286
A P +PS P A P +GD P + P T P + GSV +
Sbjct: 135 AKAPRAKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPINRRGSVSSVS 194
Query: 287 SSPVTGVSLEVREMLERSMS 346
P + + +R + R+ S
Sbjct: 195 PKPPSSFKMSIRNWVTRTPS 214
>pir||S55059 fertilin alpha-I - crab-eating macaque
emb|CAA56203.1| (X79808) fertilin alpha-I [Macaca fascicularis]
emb|CAA70487.1| (Y09304) fertilin alpha-I isoform [Macaca fascicularis]
Length = 905
Score = 30.0 bits (66), Expect = 3.7
Identities = 13/34 (38%), Positives = 16/34 (46%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP 226
+PPA P PPP A+ P + AP A P
Sbjct: 849 APPAAEAPPPEAAPPPEAAPPPEAAPAPEAAPAP 882
>gb|AAG10390.1| (AY007501) enabled-like protein [Hirudo medicinalis]
Length = 509
Score = 30.0 bits (66), Expect = 3.7
Identities = 17/35 (48%), Positives = 18/35 (50%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP 226
ASPP SPS + PPP A P APAA P
Sbjct: 255 ASPPVAP-SPSAMAPPPPAPPPPPPSPAPAAPPPP 288
>gb|AAK20944.1|AF245479_1 (AF245479) Mlx interactor kappa; Mio kappa [Mus musculus]
Length = 714
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/62 (32%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQ-SGSVETGRSSPVT 301
+PP P+TL PP +P+ +P A+ G R+ S + Q SG++ S P T
Sbjct: 588 TPPRPPPGPATLAPPRSLVVPKAERLSPPASSGSERRLSGDLNSIQPSGALSVHLSPPQT 647
Query: 302 GVS 310
+S
Sbjct: 648 VLS 650
>pir||T16484 hypothetical protein F56D2.7 - Caenorhabditis elegans
gb|AAB52680.1| (U13644) F56D2.7 gene product [Caenorhabditis elegans]
Length = 481
Score = 30.0 bits (66), Expect = 3.7
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = +2
Query: 128 PPAQTLSPSTLQPPPRA------SLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRS 289
PPA LSP PPP S+P R+ D P PT G S SV +
Sbjct: 240 PPALPLSPMPQGPPPNIPPSSIYSMP-RANDLPPTEMAPTLPQISTSSNGASPSVSPAST 298
Query: 290 SP 295
SP
Sbjct: 299 SP 300
>dbj|BAA24403.1| (AB008798) nuclear pore complex glycoprotein p62 [Oncorhynchus
mykiss]
Length = 579
Score = 30.0 bits (66), Expect = 3.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 203 APAATEGPTRQTSIYIPQGQSGSVETGRSSPVTGVSLEV 319
AP T PT T + +G++ G ++P+TGV+ +
Sbjct: 336 APVGTAAPTTTTGFSLAMKPAGAIGIGVTAPITGVATTI 374
>gb|AAK20940.1|AF245475_1 (AF245475) Mlx interactor zeta; Mio zeta [Mus musculus]
Length = 864
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/62 (32%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQ-SGSVETGRSSPVT 301
+PP P+TL PP +P+ +P A+ G R+ S + Q SG++ S P T
Sbjct: 588 TPPRPPPGPATLAPPRSLVVPKAERLSPPASSGSERRLSGDLNSIQPSGALSVHLSPPQT 647
Query: 302 GVS 310
+S
Sbjct: 648 VLS 650
>ref|NP_067430.1| WBSCR14 protein; putative hepatic transcription factor;
Williams-Beuren syndrome chromosome region 14 homolog
(human [Mus musculus]
gb|AAF68175.1|AF156604_1 (AF156604) putative hepatic transcription factor [Mus musculus]
Length = 864
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/62 (32%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQ-SGSVETGRSSPVT 301
+PP P+TL PP +P+ +P A+ G R+ S + Q SG++ S P T
Sbjct: 588 TPPRPPPGPATLAPPRSLVVPKAERLSPPASSGSERRLSGDLNSIQPSGALSVHLSPPQT 647
Query: 302 GVS 310
+S
Sbjct: 648 VLS 650
>gb|AAK20943.1|AF245478_1 (AF245478) Mlx interactor iota; Mio iota [Mus musculus]
Length = 744
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/62 (32%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQ-SGSVETGRSSPVT 301
+PP P+TL PP +P+ +P A+ G R+ S + Q SG++ S P T
Sbjct: 588 TPPRPPPGPATLAPPRSLVVPKAERLSPPASSGSERRLSGDLNSIQPSGALSVHLSPPQT 647
Query: 302 GVS 310
+S
Sbjct: 648 VLS 650
>gb|AAK20942.1|AF245477_1 (AF245477) Mlx interactor theta; Mio theta [Mus musculus]
Length = 842
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/62 (32%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQ-SGSVETGRSSPVT 301
+PP P+TL PP +P+ +P A+ G R+ S + Q SG++ S P T
Sbjct: 566 TPPRPPPGPATLAPPRSLVVPKAERLSPPASSGSERRLSGDLNSIQPSGALSVHLSPPQT 625
Query: 302 GVS 310
+S
Sbjct: 626 VLS 628
>pir||A75399 hypothetical protein - Deinococcus radiodurans (strain R1)
gb|AAF10991.1|AE001986_16 (AE001986) hypothetical protein [Deinococcus radiodurans]
Length = 527
Score = 30.0 bits (66), Expect = 3.7
Identities = 18/53 (33%), Positives = 22/53 (40%)
Frame = +2
Query: 137 QTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
+ L+P L PP AS P AP T P R + S + E SSP
Sbjct: 189 KALTPPPLTPPSPASAPSAPAQAPVDTPAPRRSEDV----ASSRAEEPAASSP 237
>pir||T43064 CED-6 protein - Caenorhabditis elegans
gb|AAC24362.1| (AF061513) candidate adaptor protein CED-6 [Caenorhabditis elegans]
Length = 492
Score = 30.0 bits (66), Expect = 3.7
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = +2
Query: 128 PPAQTLSPSTLQPPPRA------SLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRS 289
PPA LSP PPP S+P R+ D P PT G S SV +
Sbjct: 251 PPALPLSPMPQGPPPNIPPSSIYSMP-RANDLPPTEMAPTLPQISTSSNGASPSVSPAST 309
Query: 290 SP 295
SP
Sbjct: 310 SP 311
>dbj|BAB18005.1| (AB036916) LHBs [Hepatitis B virus]
dbj|BAB18012.1| (AB036917) LHBs [Hepatitis B virus]
dbj|BAB18019.1| (AB036918) LHBs [Hepatitis B virus]
Length = 400
Score = 30.0 bits (66), Expect = 3.7
Identities = 16/38 (42%), Positives = 19/38 (49%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQT 238
SP AQ + ++ PP AS RRSG P P R T
Sbjct: 78 SPQAQGVLTTSPADPPPASTNRRSGRKPTPVSPPLRDT 115
>gb|AAD42858.1|AF159693_1 (AF159693) serine/threonine kinase PKN13 [Myxococcus xanthus]
Length = 935
Score = 30.0 bits (66), Expect = 3.7
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
ASP A T+ + LQ PP L R+ A A P + +P V T P
Sbjct: 387 ASPEAGTVRKAVLQAPPGKRLASRASPADAHAPPPPPAEATTLPPSGGQHVRTQPGMPAH 446
Query: 302 GVSLEVREML 331
VR L
Sbjct: 447 SPEHTVRTQL 456
Score = 29.3 bits (64), Expect = 6.3
Identities = 17/59 (28%), Positives = 27/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 128 PPAQTLSPSTLQPPPRASLP---RRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPV 298
PP + + + P PR +P R+ G + T P R + + + + S GR S
Sbjct: 625 PPERGGDTAPVTPSPRRPIPPRRRQGGSSTEPTTQPVRVQDMPMEEDEEESTVQGRGSDT 684
Query: 299 TG 304
TG
Sbjct: 685 TG 686
>pir||T49996 AtAGP4 - Arabidopsis thaliana
gb|AAC77826.1| (AF082301) arabinogalactan-protein [Arabidopsis thaliana]
gb|AAD38870.1|AF060874_1 (AF060874) AtAGP4 [Arabidopsis thaliana]
emb|CAB89400.1| (AL353995) AtAGP4 [Arabidopsis thaliana]
gb|AAK49601.1|AF372885_1 (AF372885) AT5g10430/F12B17_220 [Arabidopsis thaliana]
Length = 135
Score = 30.0 bits (66), Expect = 3.7
Identities = 15/36 (41%), Positives = 18/36 (49%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP 226
QA P T +P PPP A+ P + PAAT P
Sbjct: 22 QAPAPTPTATPPPATPPPVATPPPVATPPPAATPAP 57
>pir||F70874 probable membrane protein - Mycobacterium tuberculosis (strain
H37RV)
emb|CAA15843.1| (AL010186) lpqW [Mycobacterium tuberculosis]
gb|AAK45460.1| (AE006998) lipoprotein, putative [Mycobacterium tuberculosis
CDC1551]
Length = 635
Score = 30.0 bits (66), Expect = 3.7
Identities = 15/38 (39%), Positives = 19/38 (49%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSI 244
P + +P T PPP A PRR D A + P+ T I
Sbjct: 523 PTPSAAPDTATPPPTA--PRRPSDPGALVKAPSNLTGI 558
>pir||T04249 hypothetical protein F20B18.50 - Arabidopsis thaliana
emb|CAB39659.1| (AL049483) predicted protein destination factor [Arabidopsis
thaliana]
emb|CAB79449.1| (AL161564) predicted protein destination factor [Arabidopsis
thaliana]
Length = 574
Score = 26.6 bits (57), Expect(2) = 4.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 10 THASDYNEGLHHNHLLRHSPRPSPP 84
TH DY++ HH+H P PS P
Sbjct: 524 THPHDYHQN-HHHHQFSAGPSPSNP 547
Score = 21.9 bits (45), Expect(2) = 4.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 135 PKPSPPQLSNLLLAPPCPGDLG 200
P PS P L PP PG G
Sbjct: 542 PSPSNPFGDAFLALPPPPGSAG 563
>gb|AAF47944.1| (AE003482) CG13708 gene product [Drosophila melanogaster]
Length = 1301
Score = 29.6 bits (65), Expect = 4.9
Identities = 15/32 (46%), Positives = 21/32 (64%)
Frame = -2
Query: 354 HLMDIDLSNISRTSRLTPVTGEERPVSTEPDC 259
H +D D+++I+R +RL VT E PVS DC
Sbjct: 597 HRVD-DMASIARATRLLEVTIENNPVSLAGDC 627
>emb|CAB77331.1| (AL160331) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 571
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 131 PAQTLSPSTLQPPPRASLPRRSGDAPAATEGPT 229
P+QT +T Q PPR S P +G AP+ T GPT
Sbjct: 501 PSQTQG-TTGQAPPRQSSP--AGQAPSTTAGPT 530
>gb|AAA30762.1| (M27811) synapsin Ib [Bos taurus]
Length = 670
Score = 29.6 bits (65), Expect = 4.9
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 119 QASPPAQTLSPSTL-QPPPRAS-LP----RRSG--DAPAATEGPTRQTSIYIPQGQSGSV 274
QA PP T S Q PP+AS +P +R G P GPTRQ S P ++G
Sbjct: 557 QAGPPQATRQTSVSGQAPPKASGVPPGGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPP 616
Query: 275 ETGRSSP 295
T + P
Sbjct: 617 TTQQPRP 623
>pir||F30411 synapsin Ib - bovine
Length = 670
Score = 29.6 bits (65), Expect = 4.9
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 119 QASPPAQTLSPSTL-QPPPRAS-LP----RRSG--DAPAATEGPTRQTSIYIPQGQSGSV 274
QA PP T S Q PP+AS +P +R G P GPTRQ S P ++G
Sbjct: 557 QAGPPQATRQTSVSGQAPPKASGVPPGGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPP 616
Query: 275 ETGRSSP 295
T + P
Sbjct: 617 TTQQPRP 623
>dbj|BAA91586.1| (AK001261) unnamed protein product [Homo sapiens]
Length = 434
Score = 29.6 bits (65), Expect = 4.9
Identities = 20/75 (26%), Positives = 30/75 (39%), Gaps = 5/75 (6%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP-----TRQTSIYIPQGQSGSVETGR 286
A P +PS P A P +GD P + P T P + GSV +
Sbjct: 135 AKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPINRRGSVSSVS 194
Query: 287 SSPVTGVSLEVREMLERSMS 346
P + + +R + R+ S
Sbjct: 195 PKPPSSFKMSIRNWVTRTPS 214
>ref|NP_057232.1| somatostatin receptor-interacting protein [Homo sapiens]
gb|AAD45121.1|AF163302_1 (AF163302) somatostatin receptor interacting protein splice variant a
[Homo sapiens]
Length = 2161
Score = 29.6 bits (65), Expect = 4.9
Identities = 20/59 (33%), Positives = 27/59 (44%), Gaps = 4/59 (6%)
Frame = +2
Query: 128 PPAQT-LSPSTLQPPPRASLPRRSGDAPAAT---EGPTRQTSIYIPQGQSGSVETGRSSP 295
PPA + SP++ QPPP + P P T + P+ +S QG S E
Sbjct: 1127 PPAPSPSSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPE 1186
Query: 296 VTG 304
TG
Sbjct: 1187 PTG 1189
>gb|AAF25626.1|AF184899_3 (AF184899) xylose isomerase [Streptomyces lividans]
Length = 395
Score = 29.6 bits (65), Expect = 4.9
Identities = 15/31 (48%), Positives = 18/31 (57%)
Frame = +1
Query: 211 RHGGPDSPDKHIHSTRAVGLRRDGAFFPSDR 303
RH G D D+ +H A G RDGAF +DR
Sbjct: 89 RHEGADGDDEPVH---APGCSRDGAFTANDR 116
>pir||T04552 hypothetical protein F28J12.220 - Arabidopsis thaliana
emb|CAA16736.1| (AL021710) pherophorin - like protein [Arabidopsis thaliana]
emb|CAB78858.1| (AL161549) pherophorin-like protein [Arabidopsis thaliana]
Length = 637
Score = 29.6 bits (65), Expect = 4.9
Identities = 22/63 (34%), Positives = 30/63 (46%), Gaps = 7/63 (11%)
Frame = +2
Query: 146 SPSTLQPPPRASL-PRRSGDAPA------ATEGPTRQTSIYIPQGQSGSVETGRSSPVTG 304
SP L PPP L P SG A + G TR +Y P+ + T ++ G
Sbjct: 26 SPLPLPPPPPPPLKPPSSGSATTKPPINPSKPGFTRSFGVYFPRASAQVHATAAAASHNG 85
Query: 305 VSLEVREMLE 334
V E+R +E
Sbjct: 86 VVSELRRQVE 95
>gb|AAC61286.1| (AC005396) putative proline-rich protein [Arabidopsis thaliana]
gb|AAG24277.1|AF195890_1 (AF195890) arabinogalactan protein [Arabidopsis thaliana]
gb|AAG41450.1|AF326868_1 (AF326868) putative proline-rich protein [Arabidopsis thaliana]
gb|AAK00372.1|AF339690_1 (AF339690) putative proline-rich protein [Arabidopsis thaliana]
Length = 191
Score = 29.6 bits (65), Expect = 4.9
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPV 298
Q PA T P + P P +S P S DAP GP+ + P + + G S V
Sbjct: 122 QVPAPAPTTKPDSPSPSPSSSPPLPSSDAP----GPSTDSISPAPSPTDVNDQNGASKMV 177
Query: 299 TGV 307
+ +
Sbjct: 178 SSL 180
>pir||T28682 hypothetical protein - Streptomyces coelicolor (fragment)
emb|CAA18899.1| (AL023496) hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 191
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/25 (68%), Positives = 17/25 (68%), Gaps = 4/25 (16%)
Frame = -1
Query: 331 QHLPHLETHPGHWGRTPRL----DGARLP 257
QHL HL HPGH GR PR GAR P
Sbjct: 60 QHL-HLRRHPGHHGRGPRQPQPPPGARPP 87
>gb|AAC27546.1| (U93160) major membrane glycoprotein [Cercopithecine herpesvirus
15]
Length = 783
Score = 29.6 bits (65), Expect = 4.9
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 125 SPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQ--GQSGSVETGRSSP 295
SPP+ SP+ P P + P P TE P+ T+ P G S S +G +SP
Sbjct: 504 SPPSGATSPNATSPKPASISP-----TPGVTETPSVITNTPYPSSIGPSSSPGSGLTSP 557
>gb|AAG40020.2|AF324669_1 (AF324669) At2g14890 [Arabidopsis thaliana]
Length = 191
Score = 29.6 bits (65), Expect = 4.9
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPV 298
Q PA T P + P P +S P S DAP GP+ + P + + G S V
Sbjct: 122 QVPAPAPTTKPDSPSPSPSSSPPLPSSDAP----GPSTDSISPAPSPTDVNDQNGASKMV 177
Query: 299 TGV 307
+ +
Sbjct: 178 SSL 180
>sp|P17599|SYN1_BOVIN SYNAPSIN I
gb|AAA30761.1| (M27810) synapsin Ia [Bos taurus]
Length = 706
Score = 29.6 bits (65), Expect = 4.9
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 119 QASPPAQTLSPSTL-QPPPRAS-LP----RRSG--DAPAATEGPTRQTSIYIPQGQSGSV 274
QA PP T S Q PP+AS +P +R G P GPTRQ S P ++G
Sbjct: 557 QAGPPQATRQTSVSGQAPPKASGVPPGGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPP 616
Query: 275 ETGRSSP 295
T + P
Sbjct: 617 TTQQPRP 623
>pir||E30411 synapsin Ia - bovine
Length = 706
Score = 29.6 bits (65), Expect = 4.9
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +2
Query: 119 QASPPAQTLSPSTL-QPPPRAS-LP----RRSG--DAPAATEGPTRQTSIYIPQGQSGSV 274
QA PP T S Q PP+AS +P +R G P GPTRQ S P ++G
Sbjct: 557 QAGPPQATRQTSVSGQAPPKASGVPPGGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPP 616
Query: 275 ETGRSSP 295
T + P
Sbjct: 617 TTQQPRP 623
>pir||S14982 glycine-rich protein (clone w10-1) - tomato (fragment)
Length = 127
Score = 29.6 bits (65), Expect = 4.9
Identities = 11/17 (64%), Positives = 13/17 (75%), Gaps = 3/17 (17%)
Frame = -3
Query: 116 RRYWVWWWVMA---GGDGRG 66
RR W WWW++ GGDG G
Sbjct: 25 RRRWRWWWLVVVGRGGDGDG 44
>gb|AAA87847.1| (U37142) brevican core protein [Rattus norvegicus]
Length = 883
Score = 29.6 bits (65), Expect = 4.9
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 119 QASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSI-YIPQG-QSGSVETGRSS 292
Q SPPAQ + P PR P R PA T P R+ S+ P G + + ETG S
Sbjct: 492 QVSPPAQAVLQLGASPSPR---PPRVHGPPAETLQPPREGSLTSTPDGAREVAGETG-SP 547
Query: 293 PVTGVSLEVRE 325
++GV E E
Sbjct: 548 ELSGVPRESEE 558
>gb|AAF35887.1|AF226728_1 (AF226728) somatostatin receptor-interacting protein splice variant
b [Homo sapiens]
Length = 1548
Score = 29.6 bits (65), Expect = 4.9
Identities = 20/59 (33%), Positives = 27/59 (44%), Gaps = 4/59 (6%)
Frame = +2
Query: 128 PPAQT-LSPSTLQPPPRASLPRRSGDAPAAT---EGPTRQTSIYIPQGQSGSVETGRSSP 295
PPA + SP++ QPPP + P P T + P+ +S QG S E
Sbjct: 514 PPAPSPSSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPE 573
Query: 296 VTG 304
TG
Sbjct: 574 PTG 576
>pir||T29265 hypothetical protein C01G8.7 - Caenorhabditis elegans
Length = 1357
Score = 29.6 bits (65), Expect = 4.9
Identities = 18/75 (24%), Positives = 24/75 (32%)
Frame = +2
Query: 2 PGRPTRPITMKDYITITYSVXXXXXXXXXXXXXXXXXXDQASPPAQTLSPSTLQPPPRAS 181
P P D TI + +S P+ T +PST PPP +
Sbjct: 279 PSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPTSSTPSDTPAPSTSVPPPTSV 338
Query: 182 LPRRSGDAPAATEGP 226
P + P GP
Sbjct: 339 QPPQPQQPPQGPPGP 353
>ref|NP_057532.1| L2DTL protein [Homo sapiens]
gb|AAF35182.1|AF195765_1 (AF195765) L2DTL protein [Homo sapiens]
gb|AAK54706.1|AF345896_1 (AF345896) RA-regulated nuclear matrix-associated protein [Homo
sapiens]
Length = 730
Score = 29.6 bits (65), Expect = 4.9
Identities = 20/75 (26%), Positives = 30/75 (39%), Gaps = 5/75 (6%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP-----TRQTSIYIPQGQSGSVETGR 286
A P +PS P A P +GD P + P T P + GSV +
Sbjct: 431 AKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPINRRGSVSSVS 490
Query: 287 SSPVTGVSLEVREMLERSMS 346
P + + +R + R+ S
Sbjct: 491 PKPPSSFKMSIRNWVTRTPS 510
>ref|NP_071723.1| myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila)
homolog); translocated to, 1 [Mus musculus]
gb|AAG22079.1|AF298887_1 (AF298887) Btk-PH-domain binding protein [Mus musculus]
Length = 547
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 137 QTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
++LSP + PP +LP+ S PAAT+ P G G+ +SP
Sbjct: 258 ESLSPKGVPQPP--TLPKASSKRPAATDSPKLSAKKPKKSGSKGTRRAPGTSP 308
>dbj|BAA91355.1| (AK000742) unnamed protein product [Homo sapiens]
Length = 730
Score = 29.6 bits (65), Expect = 4.9
Identities = 20/75 (26%), Positives = 30/75 (39%), Gaps = 5/75 (6%)
Frame = +2
Query: 122 ASPPAQTLSPSTLQPPPRASLPRRSGDAPAATEGP-----TRQTSIYIPQGQSGSVETGR 286
A P +PS P A P +GD P + P T P + GSV +
Sbjct: 431 AKAPRVKCNPSNSSPSSAACAPSCAGDLPLPSNTPTFSIKTSPAKARSPINRRGSVSSVS 490
Query: 287 SSPVTGVSLEVREMLERSMS 346
P + + +R + R+ S
Sbjct: 491 PKPPSSFKMSIRNWVTRTPS 510
>gb|AAB37646.2| (U80439) Hypothetical protein C01G8.9 [Caenorhabditis elegans]
Length = 1761
Score = 29.6 bits (65), Expect = 4.9
Identities = 18/75 (24%), Positives = 24/75 (32%)
Frame = +2
Query: 2 PGRPTRPITMKDYITITYSVXXXXXXXXXXXXXXXXXXDQASPPAQTLSPSTLQPPPRAS 181
P P D TI + +S P+ T +PST PPP +
Sbjct: 683 PSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPTSSTPSDTPAPSTSVPPPTSV 742
Query: 182 LPRRSGDAPAATEGP 226
P + P GP
Sbjct: 743 QPPQPQQPPQGPPGP 757
>gb|AAG40286.1|AF312858_1 (AF312858) leukemia associated gene protein [Mus musculus]
Length = 547
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 137 QTLSPSTLQPPPRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSP 295
++LSP + PP +LP+ S PAAT+ P G G+ +SP
Sbjct: 258 ESLSPKGVPQPP--TLPKASSKRPAATDSPKLSAKKPKKSGSKGTRRAPGTSP 308
>gb|AAF60775.1| (AC024811) contains similarity to Pfam family PF01391 (Collagen
triple helix repeat (20 copies)), score=73.8, E=3.5e-18,
N=2 [Caenorhabditis elegans]
Length = 285
Score = 29.6 bits (65), Expect = 4.9
Identities = 23/63 (36%), Positives = 28/63 (43%), Gaps = 2/63 (3%)
Frame = +2
Query: 128 PPAQTLSPSTLQPP--PRASLPRRSGDAPAATEGPTRQTSIYIPQGQSGSVETGRSSPVT 301
PP Q P PP P A LP GDAP GP + G++GS S+
Sbjct: 183 PPGQPGQPGQRGPPGEPGALLP--GGDAPPGPSGPPGRPGAPGQPGKAGSPGQDGSNGDA 240
Query: 302 GVSLE 316
GV+ E
Sbjct: 241 GVAGE 245
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,974,584
Number of Sequences: 705144
Number of extensions: 3413966
Number of successful extensions: 18480
Number of sequences better than 10.0: 336
Number of HSP's better than 10.0 without gapping: 15198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18173
length of database: 222,175,239
effective HSP length: 98
effective length of database: 153,071,127
effective search space used: 3673707048
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)