The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.1 [Apr-13-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1605_E03_I05ZS5.seq 1605_E03_I05ZS5 0 0 0 1 597
(523 letters)
Database: nr
705,144 sequences; 222,175,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
pir||B82834 hypothetical protein XF0222 [imported] - Xylell... 33 1.1
gb|AAD49217.1| (AF122013) dual-specificity phosphatase [Hom... 32 3.2
ref|XP_001990.3| CDC14 (cell division cycle 14, S. cerevisi... 32 3.2
gb|AAC16660.1| (AF064103) Cdc14A3 phosphatase [Homo sapiens] 32 3.2
gb|AAC16659.1| (AF064102) Cdc14A2 phosphatase [Homo sapiens] 32 3.2
ref|NP_003663.1| CDC14 (cell division cycle 14, S. cerevisi... 32 3.2
ref|NP_104022.1| hypothetical protein [Mesorhizobium loti] ... 31 4.1
>pir||B82834 hypothetical protein XF0222 [imported] - Xylella fastidiosa
(strain 9a5c)
gb|AAF83035.1|AE003875_10 (AE003875) hypothetical protein [Xylella fastidiosa 9a5c]
Length = 584
Score = 33.1 bits (74), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (61%)
Frame = +2
Query: 77 YPSGHEYLRTDVGFYPYNPDPNVNGLAWLSKK 172
+P+ YLRTD FYP P+ + AW++K+
Sbjct: 309 FPAFLHYLRTDPQFYPKTPEALLKEAAWIAKR 340
>gb|AAD49217.1| (AF122013) dual-specificity phosphatase [Homo sapiens]
Length = 594
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/58 (31%), Positives = 29/58 (49%)
Frame = +2
Query: 53 SKPYLHSRYPSGHEYLRTDVGFYPYNPDPNVNGLAWLSKKGFETQQDITVNFEDYDGF 226
S P+ S+ +G+ L ++PY NV + L+KK +E ++ FE YD F
Sbjct: 192 SGPHPKSKIENGYP-LHAPEAYFPYFKKHNVTAVVRLNKKIYEAKRFTDAGFEHYDLF 248
>ref|XP_001990.3| CDC14 (cell division cycle 14, S. cerevisiae) homolog A [Homo
sapiens]
Length = 433
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/58 (31%), Positives = 29/58 (49%)
Frame = +2
Query: 53 SKPYLHSRYPSGHEYLRTDVGFYPYNPDPNVNGLAWLSKKGFETQQDITVNFEDYDGF 226
S P+ S+ +G+ L ++PY NV + L+KK +E ++ FE YD F
Sbjct: 192 SGPHPKSKIENGYP-LHAPEAYFPYFKKHNVTAVVRLNKKIYEAKRFTDAGFEHYDLF 248
>gb|AAC16660.1| (AF064103) Cdc14A3 phosphatase [Homo sapiens]
Length = 383
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/58 (31%), Positives = 29/58 (49%)
Frame = +2
Query: 53 SKPYLHSRYPSGHEYLRTDVGFYPYNPDPNVNGLAWLSKKGFETQQDITVNFEDYDGF 226
S P+ S+ +G+ L ++PY NV + L+KK +E ++ FE YD F
Sbjct: 192 SGPHPKSKIENGYP-LHAPEAYFPYFKKHNVTAVVRLNKKIYEAKRFTDAGFEHYDLF 248
>gb|AAC16659.1| (AF064102) Cdc14A2 phosphatase [Homo sapiens]
Length = 623
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/58 (31%), Positives = 29/58 (49%)
Frame = +2
Query: 53 SKPYLHSRYPSGHEYLRTDVGFYPYNPDPNVNGLAWLSKKGFETQQDITVNFEDYDGF 226
S P+ S+ +G+ L ++PY NV + L+KK +E ++ FE YD F
Sbjct: 192 SGPHPKSKIENGYP-LHAPEAYFPYFKKHNVTAVVRLNKKIYEAKRFTDAGFEHYDLF 248
>ref|NP_003663.1| CDC14 (cell division cycle 14, S. cerevisiae) homolog A; S.
cerevisiae CDC14 homolog, gene A [Homo sapiens]
gb|AAB88277.1| (AF000367) cdc14 homolog [Homo sapiens]
Length = 580
Score = 31.6 bits (70), Expect = 3.2
Identities = 18/58 (31%), Positives = 29/58 (49%)
Frame = +2
Query: 53 SKPYLHSRYPSGHEYLRTDVGFYPYNPDPNVNGLAWLSKKGFETQQDITVNFEDYDGF 226
S P+ S+ +G+ L ++PY NV + L+KK +E ++ FE YD F
Sbjct: 178 SGPHPKSKIENGYP-LHAPEAYFPYFKKHNVTAVVRLNKKIYEAKRFTDAGFEHYDLF 234
>ref|NP_104022.1| hypothetical protein [Mesorhizobium loti]
dbj|BAB49808.1| (AP003000) hypothetical protein [Mesorhizobium loti]
Length = 263
Score = 31.2 bits (69), Expect = 4.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 41 IVISSKPYLHSRYPSGHEYLRTDVGFYPYNPDPNVNGL 154
+V ++KP + RY Y+ TD G Y + P +V L
Sbjct: 108 VVANTKPEIAGRYADSARYVNTDAGVYDFPPPMDVPAL 145
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,365,874
Number of Sequences: 705144
Number of extensions: 4639944
Number of successful extensions: 9516
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9515
length of database: 222,175,239
effective HSP length: 110
effective length of database: 144,609,399
effective search space used: 9110392137
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)