The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.1 [Apr-13-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1605_F11_K21ZS5.seq 1605_F11_K21ZS5 0 0 0 1 382
(253 letters)
Database: nr
705,144 sequences; 222,175,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF98205.1|AC007152_1 (AC007152) Unknown protein [Arabid... 30 5.7
sp|P55475|NODJ_RHISN NODULATION PROTEIN J >gi|2182423|gb|AA... 30 5.7
pir||T39110 probable gtpase activating protein - fission ye... 30 5.7
gb|AAB04132.1| (U61841) cutinase G-box binding protein [Fus... 29 7.5
emb|CAA12279.1| (AJ224994) insulin receptor, precursor [Sco... 29 9.8
gb|AAF40464.1|AC004809_22 (AC004809) ESTs gb|T76367 and gb|... 29 9.8
>gb|AAF98205.1|AC007152_1 (AC007152) Unknown protein [Arabidopsis thaliana]
gb|AAG50591.1|AC083891_5 (AC083891) unknown protein [Arabidopsis thaliana]
Length = 332
Score = 29.6 bits (65), Expect = 5.7
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2
Query: 144 NAHLECSFPMLILHINSCSIIFLSRS*QRYSHL 46
N H EC P L LH N +I L S Q+YS L
Sbjct: 52 NRHKECGHPSLELHCNKNNITSLFISNQKYSVL 84
>sp|P55475|NODJ_RHISN NODULATION PROTEIN J
gb|AAB91693.1| (AE000076) NodJ [Rhizobium sp. NGR234]
Length = 262
Score = 29.6 bits (65), Expect = 5.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 57 TFAMNGLGRLWNKSLCVILTLGNCILG 137
TFA R W +LC LTLG+ +LG
Sbjct: 90 TFARMQAKRTWESALCTQLTLGDIVLG 116
>pir||T39110 probable gtpase activating protein - fission yeast
(Schizosaccharomyces pombe)
emb|CAB57339.1| (AL121741) putative gtpase activating protein [Schizosaccharomyces
pombe]
Length = 320
Score = 29.6 bits (65), Expect = 5.7
Identities = 19/56 (33%), Positives = 26/56 (45%)
Frame = -1
Query: 175 DLSIFVLSL*ECAPRMQFPNVNITHKLLFHNLPKPFIAKVFSSRPVLPNMMPTFSG 8
DL +LSL +PR Q + +IT + NLP P SS+P P +G
Sbjct: 214 DLKSSILSL-YASPRPQVSSSSITTNATYQNLPSPVSTSTTSSQPYGAFHQPATTG 268
>gb|AAB04132.1| (U61841) cutinase G-box binding protein [Fusarium solani f. sp.
pisi]
Length = 540
Score = 29.3 bits (64), Expect = 7.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 79 PKPFIAKVFSSRPVLPNMMPTF 14
PKP A+ F P +PN +PTF
Sbjct: 242 PKPIAAQSFDFNPAIPNGLPTF 263
>emb|CAA12279.1| (AJ224994) insulin receptor, precursor [Scophthalmus maximus]
Length = 1245
Score = 28.9 bits (63), Expect = 9.8
Identities = 19/64 (29%), Positives = 31/64 (47%)
Frame = +3
Query: 21 GIILGRTGRDENTFAMNGLGRLWNKSLCVILTLGNCILGAHSYRDKTNIDKSPYANCIAV 200
G G+T +NT + GR W+++ C + L NC GA S + + D+ C+
Sbjct: 60 GTAQGQTICSQNTINGHFRGRCWSQNHCQRMCLDNCKHGACSLQGQCCHDQ-----CLGG 114
Query: 201 YSQP 212
S+P
Sbjct: 115 CSEP 118
>gb|AAF40464.1|AC004809_22 (AC004809) ESTs gb|T76367 and gb|AA404955 come from this gene.
[Arabidopsis thaliana]
Length = 488
Score = 28.9 bits (63), Expect = 9.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 162 LFCPYRNAHLECSFPMLILH 103
+F PY N HLE FP+ I+H
Sbjct: 435 VFVPYANDHLEKGFPLPIMH 454
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,002,143
Number of Sequences: 705144
Number of extensions: 1705450
Number of successful extensions: 395136994687
Number of sequences better than 10.0: 268721852
Number of HSP's better than 10.0 without gapping: 3399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3455
length of database: 222,175,239
effective HSP length: 59
effective length of database: 180,571,743
effective search space used: 4333721832
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)