Score E
Sequences producing significant alignments: (bits) Value
pir||T09217 protein sam2B - spinach >gi|2253092|emb|CAA7459... 35 0.33
gb|AAH08648.1|AAH08648 (BC008648) Unknown (protein for IMAG... 34 0.43
ref|NP_071918.1| zinc finger protein 106 [Homo sapiens] >gi... 34 0.56
pir||T23354 hypothetical protein K06A4.1 - Caenorhabditis e... 34 0.56
dbj|BAB02219.1| (AP001303) contains similarity to nucleolin... 34 0.56
ref|XP_016721.1| zinc finger protein 106 [Homo sapiens] 34 0.56
ref|NP_066554.1| neurofilament, heavy polypeptide (200kD); ... 33 0.96
sp|P12036|NFH_HUMAN NEUROFILAMENT TRIPLET H PROTEIN (200 KD... 33 0.96
ref|XP_009907.2| neurofilament, heavy polypeptide (200kD) [... 33 0.96
dbj|BAA74868.1| (AB020652) KIAA0845 protein [Homo sapiens] 33 0.96
ref|XP_008613.1| hypothetical protein FLJ20721 [Homo sapiens] 33 0.96
emb|CAB66674.1| (AL136740) hypothetical protein [Homo sapiens] 33 0.96
ref|NP_048045.1| orf 73 [Ateline herpesvirus 3] >gi|1127819... 33 0.96
gb|AAH05005.1|AAH05005 (BC005005) Unknown (protein for MGC:... 33 0.96
gb|AAF60645.1| (AC006780) Hypothetical protein Y47D9A.3 [Ca... 33 1.2
sp|P49610|STRH_STRPN BETA-N-ACETYLHEXOSAMINIDASE PRECURSOR ... 32 1.6
dbj|BAB27925.1| (AK011935) putative [Mus musculus] 32 2.1
gb|AAB47851.1| (U86521) kinesin [Nectria haematococca] 32 2.1
pir||B64560 poly E-rich protein - Helicobacter pylori (stra... 32 2.1
gb|AAH04653.1|AAH04653 (BC004653) Unknown (protein for MGC:... 32 2.1
sp|P48467|KINH_NEUCR KINESIN HEAVY CHAIN >gi|7441386|pir||T... 32 2.8
pir||T05037 hypothetical protein F13C5.170 - Arabidopsis th... 32 2.8
pir||T39571 probable regulatory protein sir2-like - fission... 32 2.8
gb|AAD53262.1|AF149296_1 (AF149296) hard-surface inducible ... 32 2.8
gb|AAC98505.1| (AF091996) rhoGAP protein [Plasmodium falcip... 31 3.6
gb|AAK05748.1|AE006395_8 (AE006395) UNKNOWN PROTEIN [Lactoc... 31 3.6
dbj|BAA95789.1| (AB009883) KED [Nicotiana tabacum] 31 3.6
emb|CAB61360.2| (AL133028) hypothetical protein [Homo sapiens] 31 4.7
emb|CAB70699.1| (AL137336) hypothetical protein [Homo sapiens] 31 4.7
pir||T29460 hypothetical protein T05B11.3 - Caenorhabditis ... 31 4.7
gb|AAB52722.1| (U78318) chitinase [Entamoeba dispar] 31 4.7
pir||T42702 hypothetical protein DKFZp434F117.1 - human (fr... 31 4.7
ref|NP_077529.1| EsV-1-44 [Ectocarpus siliculosus virus] 31 4.7
dbj|BAA86525.1| (AB033037) KIAA1211 protein [Homo sapiens] 31 4.7
gb|AAF50570.1| (AE003559) CG8582 gene product [Drosophila m... 31 4.7
gb|AAB38208.1| (U22395) growth associated protein GAP-43 [X... 30 6.2
dbj|BAA91343.1| (AK000726) unnamed protein product [Homo sa... 30 6.2
ref|NP_005072.1| zinc finger protein 142 (clone pHZ-49) [Ho... 30 6.2
pir||T04141 histone deacetylase (EC 3.5.1.-) HD2-p39, nucle... 30 6.2
dbj|BAB21849.1| (AB051545) KIAA1758 protein [Homo sapiens] 30 6.2
gb|AAF53171.1| (AE003635) CG17211 gene product [Drosophila ... 30 6.2
sp|P06180|HIBN_XENLA HISTONE-BINDING PROTEIN N1/N2 >gi|8583... 30 6.2
gb|AAC49698.1| (U94772) cyclin-dependent kinase inhibitor p... 30 6.2
pir||T01132 hypothetical protein F26B6.8 - Arabidopsis thal... 30 6.2
sp|P12675|ICAL_PIG CALPAIN INHIBITOR (CALPASTATIN) >gi|8916... 30 6.2
pir||T48401 histone deacetylase-like protein - Arabidopsis ... 30 6.2
sp|O02705|HS9A_PIG HEAT SHOCK PROTEIN HSP 90-ALPHA (HSP 86)... 30 6.2
ref|NP_079245.1| hypothetical protein FLJ11703 [Homo sapien... 30 6.2
ref|XP_002586.3| zinc finger protein 142 (clone pHZ-49) [Ho... 30 6.2
ref|NP_116446.1| T98 [Tupaia herpesvirus] >gi|14210778|gb|A... 30 8.1
gb|AAF56376.1| (AE003750) CG13648 gene product [Drosophila ... 30 8.1
gb|AAF68625.1|AF254073_1 (AF254073) histone deacetylase 2 i... 30 8.1
gb|AAF36539.1| (AF174498) GR AF-1 specific protein phosphat... 30 8.1
pir||H72512 hypothetical protein APE2077 - Aeropyrum pernix... 30 8.1
pir||T16368 hypothetical protein F45E12.2 - Caenorhabditis ... 30 8.1
gb|AAF55629.2| (AE003724) CG6026 gene product [Drosophila m... 30 8.1
gb|AAH05470.1|AAH05470 (BC005470) Similar to ubiquitin spec... 30 8.1
dbj|BAB07160.1| (AP001518) L-arabinose ABC transporter (ATP... 30 8.1
gb|AAF81929.1|AF107291_1 (AF107291) elongation factor 2 [Ca... 30 8.1
dbj|BAA24352.1| (AB000279) Pol-like peptide [Alternaria alt... 30 8.1
gb|AAC02578.1| (AF045641) Hypothetical protein F53H1.4 [Cae... 30 8.1
pir||B34457 204 protein - mouse 30 8.1
gb|AAF81925.1|AF107287_1 (AF107287) elongation factor 2 [Ca... 30 8.1
pir||S70962 regulatory protein RAG3 - yeast (Kluyveromyces ... 30 8.1
ref|NP_012897.1| Large subunit of transcription factor tfII... 30 8.1
pir||T00390 KIAA0614 protein - human (fragment) >gi|3327042... 30 8.1
>pir||T09217 protein sam2B - spinach
emb|CAA74590.1| (Y14198) hypothetical protein [Spinacia oleracea]
Length = 339
Score = 34.7 bits (78), Expect = 0.33
Identities = 27/110 (24%), Positives = 42/110 (37%)
Frame = +2
Query: 77 RDREFSKWSEGEALRKLAEGSXXXXXXXXXXXXXXXXXXXXXXGAGNDPPAQVPRVVKRA 256
RD+EF W E +L +L+ S G G+D P R
Sbjct: 44 RDKEFQLWGENLSLGRLSF-SRKSNAVEYSSGDENGNGNGEEEGGGDDEPVFDWETEMRK 102
Query: 257 GIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKV 406
+ E + +E+ + E + D G+++ EEEK + E EKV
Sbjct: 103 RVKEIEEMRELEKKAEELQGRIDDEGSDGSGVDETEEEKKMRVRKELEKV 152
>gb|AAH08648.1|AAH08648 (BC008648) Unknown (protein for IMAGE:3866238) [Homo sapiens]
Length = 358
Score = 34.3 bits (77), Expect = 0.43
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +2
Query: 242 VVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQD 421
V + A P E+ K E S P +K K KAEEEKA + EK + ++
Sbjct: 141 VKEEAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKE 200
Query: 422 TAEKSSETKPAIPD 463
A K KP + +
Sbjct: 201 EAPKKEAPKPKVEE 214
>ref|NP_071918.1| zinc finger protein 106 [Homo sapiens]
gb|AAG35666.1|AF205632_1 (AF205632) zinc finger protein 106 [Homo sapiens]
Length = 1883
Score = 33.9 bits (76), Expect = 0.56
Identities = 24/69 (34%), Positives = 36/69 (51%)
Frame = +2
Query: 260 IPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSS 439
IP P+L+ + DSSE G PDS +K N E+ +TS+ ++V+ T+E +
Sbjct: 1428 IPNPQLEV-VAIDSSESGEEKPDSPSKKDIWNSTEQNPLETSRSGCDEVS---STSEIGT 1483
Query: 440 ETKPAIPDS 466
K IP S
Sbjct: 1484 RYKDGIPVS 1492
>pir||T23354 hypothetical protein K06A4.1 - Caenorhabditis elegans
emb|CAA94781.1| (Z70755) contains similarity to Pfam domain: PF01400 (Astacin
(Peptidase family M12A)), Score=91.1, E-value=7e-24, N=1
[Caenorhabditis elegans]
Length = 511
Score = 33.9 bits (76), Expect = 0.56
Identities = 20/63 (31%), Positives = 33/63 (51%), Gaps = 5/63 (7%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSK-----DETEKVNPIQDTAEKS 436
E +K+ +ED +E S + K+ +K EE+ T DET+ P++ + +
Sbjct: 398 EREKAPKEDKNEGSSRAKKASKENQDADKKPEEEGKTPPPANRDDETKAPAPVEPSPKPE 457
Query: 437 SETKPAIP 460
E KPA P
Sbjct: 458 EEVKPATP 465
>dbj|BAB02219.1| (AP001303) contains similarity to nucleolin, protein localized in
the nucleoli~gene_id:K24M9.10 [Arabidopsis thaliana]
Length = 610
Score = 33.9 bits (76), Expect = 0.56
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 18/79 (22%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPELDKSMEEDSSEFGS--TLPDSLKQKIGLNKAEEE-KADTSKDE 394
PA+ P VVK A P + S EEDS E S P + K K+ +++E +D S DE
Sbjct: 254 PAKKPTVVKNAK-PAAKDSSSSEEDSDEEESDDEKPPTKKAKVSSKTSKQESSSDESSDE 312
Query: 395 T-------EKVNP--------IQDTAEKSSETKPAIP 460
+ EKV P + D +KS+ +P P
Sbjct: 313 SDKEESKDEKVTPKKKDSDVEMVDAEQKSNAKQPKTP 349
>ref|XP_016721.1| zinc finger protein 106 [Homo sapiens]
Length = 1352
Score = 33.9 bits (76), Expect = 0.56
Identities = 24/69 (34%), Positives = 36/69 (51%)
Frame = +2
Query: 260 IPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSS 439
IP P+L+ + DSSE G PDS +K N E+ +TS+ ++V+ T+E +
Sbjct: 897 IPNPQLEV-VAIDSSESGEEKPDSPSKKDIWNSTEQNPLETSRSGCDEVS---STSEIGT 952
Query: 440 ETKPAIPDS 466
K IP S
Sbjct: 953 RYKDGIPVS 961
>ref|NP_066554.1| neurofilament, heavy polypeptide (200kD); Neurofilament, heavy
polypeptide [Homo sapiens]
gb|AAF13722.1|AF203032_1 (AF203032) neurofilament protein [Homo sapiens]
Length = 1026
Score = 33.1 bits (74), Expect = 0.96
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 254 AGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEK 433
A P E+ K E S P +K K KAEEEKA + EK + ++ A K
Sbjct: 813 AKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPK 872
Query: 434 SSETKPAIPD 463
KP + +
Sbjct: 873 KEAPKPKVEE 882
>sp|P12036|NFH_HUMAN NEUROFILAMENT TRIPLET H PROTEIN (200 KDA NEUROFILAMENT PROTEIN)
(NEUROFILAMENT HEAVY POLYPEPTIDE) (NF-H)
pir||QFHUH neurofilament triplet H protein - human
emb|CAA33366.1| (X15306) heavy neurofilament subunit [Homo sapiens]
Length = 1020
Score = 33.1 bits (74), Expect = 0.96
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 254 AGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEK 433
A P E+ K E S P +K K KAEEEKA + EK + ++ A K
Sbjct: 807 AKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPK 866
Query: 434 SSETKPAIPD 463
KP + +
Sbjct: 867 KEAPKPKVEE 876
>ref|XP_009907.2| neurofilament, heavy polypeptide (200kD) [Homo sapiens]
Length = 1020
Score = 33.1 bits (74), Expect = 0.96
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 254 AGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEK 433
A P E+ K E S P +K K KAEEEKA + EK + ++ A K
Sbjct: 807 AKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPK 866
Query: 434 SSETKPAIPD 463
KP + +
Sbjct: 867 KEAPKPKVEE 876
>dbj|BAA74868.1| (AB020652) KIAA0845 protein [Homo sapiens]
Length = 933
Score = 33.1 bits (74), Expect = 0.96
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 254 AGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEK 433
A P E+ K E S P +K K KAEEEKA + EK + ++ A K
Sbjct: 720 AKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPK 779
Query: 434 SSETKPAIPD 463
KP + +
Sbjct: 780 KEAPKPKVEE 789
>ref|XP_008613.1| hypothetical protein FLJ20721 [Homo sapiens]
Length = 583
Score = 33.1 bits (74), Expect = 0.96
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPEL----DKSMEEDSSEFGSTL----PDSLKQKIGLNKAEEEKAD 379
PA +PR K G P+ +L K +E ++ E S L P+ + L E+A
Sbjct: 46 PATLPRAKKMKG-PIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAA 104
Query: 380 TSKDETEKVNPIQDTAEKSSETKP 451
T+K + + NPIQ + + TKP
Sbjct: 105 TTKADKDIKNPIQPSFKMLKNTKP 128
>emb|CAB66674.1| (AL136740) hypothetical protein [Homo sapiens]
Length = 573
Score = 33.1 bits (74), Expect = 0.96
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPEL----DKSMEEDSSEFGSTL----PDSLKQKIGLNKAEEEKAD 379
PA +PR K G P+ +L K +E ++ E S L P+ + L E+A
Sbjct: 46 PATLPRAKKMKG-PIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAA 104
Query: 380 TSKDETEKVNPIQDTAEKSSETKP 451
T+K + + NPIQ + + TKP
Sbjct: 105 TTKADKDIKNPIQPSFKMLKNTKP 128
>ref|NP_048045.1| orf 73 [Ateline herpesvirus 3]
pir||T42987 hypothetical protein 73 - ateline herpesvirus 3 (strain 73)
gb|AAC95598.1| (AF083424) orf 73 [Ateline herpesvirus 3]
Length = 447
Score = 33.1 bits (74), Expect = 0.96
Identities = 14/43 (32%), Positives = 26/43 (59%)
Frame = +2
Query: 320 LPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETK 448
LPD+ +QK+ ++ ++ K +TS +E E+ N D + +E K
Sbjct: 29 LPDTKRQKVKASRTKKPKKNTSTEEGERSNARSDDTHRQTEEK 71
>gb|AAH05005.1|AAH05005 (BC005005) Unknown (protein for MGC:1012) [Homo sapiens]
Length = 609
Score = 33.1 bits (74), Expect = 0.96
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPEL----DKSMEEDSSEFGSTL----PDSLKQKIGLNKAEEEKAD 379
PA +PR K G P+ +L K +E ++ E S L P+ + L E+A
Sbjct: 46 PATLPRAKKMKG-PIKDLIKAKGKELETENEERNSKLVVDKPEQTVKTFPLPAVGLERAA 104
Query: 380 TSKDETEKVNPIQDTAEKSSETKP 451
T+K + + NPIQ + + TKP
Sbjct: 105 TTKADKDIKNPIQPSFKMLKNTKP 128
>gb|AAF60645.1| (AC006780) Hypothetical protein Y47D9A.3 [Caenorhabditis elegans]
Length = 220
Score = 32.7 bits (73), Expect = 1.2
Identities = 22/72 (30%), Positives = 37/72 (50%), Gaps = 5/72 (6%)
Frame = +2
Query: 245 VKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSK-----DETEKVN 409
VK++ P E +K+ +ED +E S + K+ +K EE+ T DET+
Sbjct: 100 VKKSKKPS-EREKAPKEDKNEGSSRAKKASKENQDADKKPEEEGKTPPPANRDDETKAPA 158
Query: 410 PIQDTAEKSSETKPAIP 460
P++ + + E KP P
Sbjct: 159 PVEPSPKPEEEVKPVTP 175
>sp|P49610|STRH_STRPN BETA-N-ACETYLHEXOSAMINIDASE PRECURSOR
pir||A56390 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase (EC
3.2.1.96) precursor - Streptococcus pneumoniae
gb|AAC41450.1| (L36923) beta-N-acetylhexosaminidase [Streptococcus pneumoniae]
Length = 1311
Score = 32.3 bits (72), Expect = 1.6
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +2
Query: 230 QVPRVVKRAGIPMPELDKSMEEDSSEFGS----TLPDSLKQKIGLNKAEEEKADTSKDET 397
+ P K A +P E +K EE SS P S +++ KAEE A K+E
Sbjct: 80 ETPATDKVASLPKTE-EKPQEEVSSTPSDKAEVVTPTSAEKETANKKAEE--ASPKKEEA 136
Query: 398 EKVNPIQDTAEKSSETKPAIPDSFDA 475
++V+ + +K+ + KPA D A
Sbjct: 137 KEVDSKESNTDKTDKDKPAKKDEAKA 162
>dbj|BAB27925.1| (AK011935) putative [Mus musculus]
Length = 236
Score = 32.0 bits (71), Expect = 2.1
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETE----KVNPIQDTAEKSS 439
E ++ EED E + S+K KI LNK EE+ DT K + K P+ +
Sbjct: 161 ESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDE 220
Query: 440 E 442
E
Sbjct: 221 E 221
>gb|AAB47851.1| (U86521) kinesin [Nectria haematococca]
Length = 929
Score = 32.0 bits (71), Expect = 2.1
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2
Query: 227 AQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKV 406
++ P + +RAG P LDK E+ + L D + +K A E++ +K+E +
Sbjct: 416 SETPAISERAGTPSLPLDKDEREEFLRRENELQDQISEKESQATAAEKQLRETKEELVYL 475
Query: 407 NPIQDTAEKSSE 442
+K +E
Sbjct: 476 KEHDSKVDKENE 487
>pir||B64560 poly E-rich protein - Helicobacter pylori (strain 26695)
gb|AAD07390.1| (AE000550) poly E-rich protein [Helicobacter pylori 26695]
Length = 505
Score = 32.0 bits (71), Expect = 2.1
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +2
Query: 269 PELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETK 448
P+ +K ++D ++ G TL D +++ ++ + K+ET++ +PI++ +++ E K
Sbjct: 202 PQEEKKPKDDETQEGETLKD---KEVSKELEAPQELEIPKEETQEQDPIKEETQENKEEK 258
>gb|AAH04653.1|AAH04653 (BC004653) Unknown (protein for MGC:7701) [Mus musculus]
Length = 119
Score = 32.0 bits (71), Expect = 2.1
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETE----KVNPIQDTAEKSS 439
E ++ EED E + S+K KI LNK EE+ DT K + K P+ +
Sbjct: 44 ESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPNRGKAKPVVSDFDSDE 103
Query: 440 E 442
E
Sbjct: 104 E 104
>sp|P48467|KINH_NEUCR KINESIN HEAVY CHAIN
pir||T10164 kinesin heavy chain - Neurospora crassa
gb|AAB52961.1| (L47106) kinesin [Neurospora crassa]
Length = 928
Score = 31.6 bits (70), Expect = 2.8
Identities = 17/56 (30%), Positives = 27/56 (47%)
Frame = +2
Query: 227 AQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDE 394
A+ P + RAG P LDK E+ + L D + +K + A E + +K+E
Sbjct: 416 AETPAISDRAGTPSLPLDKDEREEFLRRENELQDQIAEKESIAAAAERQLRETKEE 471
>pir||T05037 hypothetical protein F13C5.170 - Arabidopsis thaliana
emb|CAA16757.1| (AL021711) putative protein [Arabidopsis thaliana]
emb|CAB78902.1| (AL161549) putative protein [Arabidopsis thaliana]
Length = 406
Score = 31.6 bits (70), Expect = 2.8
Identities = 23/64 (35%), Positives = 35/64 (53%)
Frame = +2
Query: 239 RVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQ 418
R+VK++ I +PEL +EED +F + D K+G K + +K D S E K N Q
Sbjct: 28 RLVKKS-ISVPELVDEVEEDLDDF-TEPADDFNDKVG-KKRQRKKKDESGLEKTKKNKKQ 84
Query: 419 DTAE 430
++ E
Sbjct: 85 NSEE 88
>pir||T39571 probable regulatory protein sir2-like - fission yeast
(Schizosaccharomyces pombe)
emb|CAB38511.2| (AL035637) putative regulatory protein sir2-like
[Schizosaccharomyces pombe]
Length = 471
Score = 31.6 bits (70), Expect = 2.8
Identities = 21/65 (32%), Positives = 30/65 (45%)
Frame = +2
Query: 287 MEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKPAIPDS 466
M+ D + FG LPDS K+G + EE + KV P+ +E S P P
Sbjct: 335 MKPDITFFGEALPDSFFNKVGSGELEETDLLICIGTSLKVAPV---SELISVIPPTTPQI 391
Query: 467 FDART 481
+ +RT
Sbjct: 392 YISRT 396
>gb|AAD53262.1|AF149296_1 (AF149296) hard-surface inducible protein [Glomerella cingulata]
Length = 567
Score = 31.6 bits (70), Expect = 2.8
Identities = 14/69 (20%), Positives = 33/69 (47%)
Frame = +2
Query: 266 MPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSET 445
+ +L K +E+ +++ + D + + L KAEEE+ + T+K ++ + +
Sbjct: 385 LSDLQKQLEDATNDLKTVESDRDSKNLALKKAEEERDQARSELTKKTLALEVAEREGASV 444
Query: 446 KPAIPDSFD 472
+ + D D
Sbjct: 445 RQKLEDDLD 453
>gb|AAC98505.1| (AF091996) rhoGAP protein [Plasmodium falciparum]
gb|AAF01782.1| (AF091997) rhoGAP protein [Plasmodium falciparum]
Length = 487
Score = 31.2 bits (69), Expect = 3.6
Identities = 19/57 (33%), Positives = 28/57 (48%)
Frame = +2
Query: 278 DKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETK 448
DKS E S E S S K +K++E K+D SK + K + + KS ++K
Sbjct: 311 DKSDESKSDESKSDESKSDDSKSDESKSDESKSDESKSDESKSDESKSDESKSDDSK 367
Score = 30.8 bits (68), Expect = 4.7
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Frame = +2
Query: 281 KSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDT------AEKSSE 442
KS E S E S S + K +K+++ K++ KDE K+N D + K S
Sbjct: 337 KSDESKSDESKSDESKSDESKSDESKSDDSKSEECKDENNKINNESDEDSNESYSSKESS 396
Query: 443 TKPAIPD 463
+KP+ D
Sbjct: 397 SKPSSLD 403
>gb|AAK05748.1|AE006395_8 (AE006395) UNKNOWN PROTEIN [Lactococcus lactis subsp. lactis]
Length = 668
Score = 31.2 bits (69), Expect = 3.6
Identities = 27/76 (35%), Positives = 39/76 (50%), Gaps = 12/76 (15%)
Frame = +2
Query: 236 PRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSL-------KQKIGLNKAEEEKADTSKDE 394
P ++ +PM E S E S T DS+ + K+ AEE K+D+ +D
Sbjct: 213 PVMMSANEVPMDE--PSEPEISETDADTKTDSIIDEKSEVEPKVTEEPAEEIKSDSKEDS 270
Query: 395 TEKVNPIQDTAEKS-----SETKPAIPD 463
TE ++ AE+ ETK IPD
Sbjct: 271 TENNQALESGAEEKVTDSPKETKSDIPD 298
>dbj|BAA95789.1| (AB009883) KED [Nicotiana tabacum]
Length = 513
Score = 31.2 bits (69), Expect = 3.6
Identities = 18/53 (33%), Positives = 25/53 (46%)
Frame = +2
Query: 290 EEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETK 448
EE++ E G K K K + EK D SK+ETE+ + +K E K
Sbjct: 225 EEENDEKGVKKDKEKKNKEKKEKKDNEKKDKSKEETEEEKDDEKGEKKDKEKK 277
>emb|CAB61360.2| (AL133028) hypothetical protein [Homo sapiens]
Length = 701
Score = 30.8 bits (68), Expect = 4.7
Identities = 25/77 (32%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPELDKSMEED--SSEFGSTLPDSLKQKIGLNKAEEEKADTSKDET 397
P V + +RAG P PE + +ED SS+ P +++ G + EEE+A K +
Sbjct: 451 PYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPSPPGPEERKGQKRDEEEEATERKPAS 510
Query: 398 EKVNPIQDTAEKSSETKPA 454
+ Q EK S+T A
Sbjct: 511 PPLPATQQ--EKPSQTPEA 527
>emb|CAB70699.1| (AL137336) hypothetical protein [Homo sapiens]
Length = 622
Score = 30.8 bits (68), Expect = 4.7
Identities = 25/77 (32%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPELDKSMEED--SSEFGSTLPDSLKQKIGLNKAEEEKADTSKDET 397
P V + +RAG P PE + +ED SS+ P +++ G + EEE+A K +
Sbjct: 372 PYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPSPPGPEERKGQKRDEEEEATERKPAS 431
Query: 398 EKVNPIQDTAEKSSETKPA 454
+ Q EK S+T A
Sbjct: 432 PPLPATQQ--EKPSQTPEA 448
>pir||T29460 hypothetical protein T05B11.3 - Caenorhabditis elegans
gb|AAB37069.1| (U53151) T05B11.3 gene product [Caenorhabditis elegans]
Length = 226
Score = 30.8 bits (68), Expect = 4.7
Identities = 25/75 (33%), Positives = 36/75 (47%), Gaps = 4/75 (5%)
Frame = +2
Query: 218 DPPAQVPRVVKRAGIPMPELDKSMEEDSSE----FGSTLPDSLKQKIGLNKAEEEKADTS 385
D A P +V A PM + S S+ ST+P +KI L KA++E+ +
Sbjct: 75 DDNAAAPAIVVPAVEPMVNGNHSASSGGSKGPSPILSTVPRIEAEKIRLWKAQQEQLLSK 134
Query: 386 KDETEKVNPIQDTAEKSSE 442
KDE E+ I+ A E
Sbjct: 135 KDEAEEKKKIELRANAKKE 153
>gb|AAB52722.1| (U78318) chitinase [Entamoeba dispar]
Length = 558
Score = 30.8 bits (68), Expect = 4.7
Identities = 17/54 (31%), Positives = 26/54 (47%)
Frame = +2
Query: 290 EEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKP 451
E+ +F LPDS K ++++ E +DT D +E + SSE KP
Sbjct: 55 EKKPGDFFEKLPDSSDTKPDSSESKHESSDTKPDSSEIKPDSSEIKPDSSEIKP 108
>pir||T42702 hypothetical protein DKFZp434F117.1 - human (fragment)
Length = 834
Score = 30.8 bits (68), Expect = 4.7
Identities = 25/77 (32%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPELDKSMEED--SSEFGSTLPDSLKQKIGLNKAEEEKADTSKDET 397
P V + +RAG P PE + +ED SS+ P +++ G + EEE+A K +
Sbjct: 584 PYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPSPPGPEERKGQKRDEEEEATERKPAS 643
Query: 398 EKVNPIQDTAEKSSETKPA 454
+ Q EK S+T A
Sbjct: 644 PPLPATQQ--EKPSQTPEA 660
>ref|NP_077529.1| EsV-1-44 [Ectocarpus siliculosus virus]
Length = 171
Score = 30.8 bits (68), Expect = 4.7
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDET--EKVNPIQDTAEKSSET 445
E +S +D S + ST DS + +A+++ +DTS+D+T E+ + + D E + T
Sbjct: 106 EFTQSDSDDDSSYQSTSSDSSSSE----EADDDTSDTSEDQTAGEEDDDVDDVLEWETLT 161
Query: 446 KPAIPDSFD 472
A D D
Sbjct: 162 IDASADDQD 170
>dbj|BAA86525.1| (AB033037) KIAA1211 protein [Homo sapiens]
Length = 803
Score = 30.8 bits (68), Expect = 4.7
Identities = 25/77 (32%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPELDKSMEED--SSEFGSTLPDSLKQKIGLNKAEEEKADTSKDET 397
P V + +RAG P PE + +ED SS+ P +++ G + EEE+A K +
Sbjct: 553 PYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPSPPGPEERKGQKRDEEEEATERKPAS 612
Query: 398 EKVNPIQDTAEKSSETKPA 454
+ Q EK S+T A
Sbjct: 613 PPLPATQQ--EKPSQTPEA 629
>gb|AAF50570.1| (AE003559) CG8582 gene product [Drosophila melanogaster]
Length = 476
Score = 30.8 bits (68), Expect = 4.7
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 278 DKSMEEDS---SEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQ-DTAEKSSET 445
+KS E D+ SE ST D + + + E+EK++ KD+ E ++ D EKS +
Sbjct: 197 EKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEDEKSEIVKDDKENSQDVKDDKTEKSEDV 256
Query: 446 KPAIPDS 466
K + S
Sbjct: 257 KDKLEGS 263
>gb|AAB38208.1| (U22395) growth associated protein GAP-43 [Xenopus laevis]
prf||2202189A XGAP-43 protein [Xenopus laevis]
Length = 212
Score = 30.4 bits (67), Expect = 6.2
Identities = 13/40 (32%), Positives = 22/40 (54%)
Frame = +2
Query: 356 KAEEEKADTSKDETEKVNPIQDTAEKSSETKPAIPDSFDA 475
KAE + D KDE E+ P + ++ + ++ A PD +A
Sbjct: 173 KAESSQEDVKKDEAEETKPSESAQQEEAVSEEAKPDQENA 212
>dbj|BAA91343.1| (AK000726) unnamed protein product [Homo sapiens]
Length = 766
Score = 30.4 bits (67), Expect = 6.2
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +2
Query: 251 RAGIPMPELDKSMEEDSSEF---GSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQD 421
+A + + E DKS +D E G L L QK+ E+E D +E EKV
Sbjct: 53 QALLTLDEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVQKSSA 112
Query: 422 TAEKSSETKPAIPD 463
E + +P+
Sbjct: 113 PREVQKTEESKVPE 126
>ref|NP_005072.1| zinc finger protein 142 (clone pHZ-49) [Homo sapiens]
sp|P52746|Z142_HUMAN ZINC FINGER PROTEIN 142 (HA4654)
dbj|BAA13242.1| (D87073) similar to Human zinc finger protein(ZNF142) [Homo
sapiens]
Length = 1687
Score = 30.4 bits (67), Expect = 6.2
Identities = 18/49 (36%), Positives = 29/49 (58%), Gaps = 2/49 (4%)
Frame = +2
Query: 263 PMPELDKSMEEDSSEFGSTLP--DSLKQKIGLNKAEEEKADTSKDETEKVN 409
P P+L E S E G+ LP ++ +++ N +EEK+DT KD + V+
Sbjct: 93 PAPKLPPGEREPSQEAGTPLPGQETAEEE---NVEKEEKSDTQKDSQKAVD 140
>pir||T04141 histone deacetylase (EC 3.5.1.-) HD2-p39, nucleolar - maize
gb|AAB63262.1| (U82815) nucleolar histone deacetylase HD2-p39 [Zea mays]
gb|AAC61674.1| (AF026917) histone deacetylase HD2-p39 [Zea mays]
Length = 307
Score = 30.4 bits (67), Expect = 6.2
Identities = 21/61 (34%), Positives = 30/61 (48%)
Frame = +2
Query: 218 DPPAQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDET 397
D VP VVK G + KS E+ + + PDS K K + E+E D+ +DET
Sbjct: 109 DEELNVP-VVKENGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDET 167
Query: 398 E 400
+
Sbjct: 168 D 168
>dbj|BAB21849.1| (AB051545) KIAA1758 protein [Homo sapiens]
Length = 1662
Score = 30.4 bits (67), Expect = 6.2
Identities = 19/62 (30%), Positives = 36/62 (57%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKP 451
E++ ME+ SEF T + L+ K LN+ E D K+E +K+ + + ++ S++KP
Sbjct: 221 EMEAQMEKQLSEF-DTEREQLRAK--LNREEAHTTDL-KEEIDKMRKMIEQLKRGSDSKP 276
Query: 452 AI 457
++
Sbjct: 277 SL 278
>gb|AAF53171.1| (AE003635) CG17211 gene product [Drosophila melanogaster]
Length = 1354
Score = 30.4 bits (67), Expect = 6.2
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 317 TLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKPAIP 460
T P K +K K T K T K + + T KSS KPA+P
Sbjct: 684 TTPKPTTPKTTTSKPTTPKITTPKPTTPKPSTTKTTTPKSSSAKPALP 731
>sp|P06180|HIBN_XENLA HISTONE-BINDING PROTEIN N1/N2
pir||A25680 nuclear histone-binding protein N1/N2 - African clawed frog
emb|CAA28419.1| (X04712) N1/N2 (AA 1-590) [Xenopus laevis]
Length = 590
Score = 30.4 bits (67), Expect = 6.2
Identities = 23/84 (27%), Positives = 37/84 (43%), Gaps = 1/84 (1%)
Frame = +2
Query: 236 PRVVKRAGIPMPELDKSMEE-DSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNP 412
P +K I E D S E+ D+ E + PDS + EEK D+ E+++
Sbjct: 226 PETLKEKSIETKEKDLSKEKTDAKETANQSPDS-------TEVAEEKMDSEASESKESTS 278
Query: 413 IQDTAEKSSETKPAIPDSFDARTHG 487
I T +++ KP P+ + G
Sbjct: 279 IPPTENEAN--KPDDPEKMEEEEEG 301
>gb|AAC49698.1| (U94772) cyclin-dependent kinase inhibitor protein [Arabidopsis
thaliana]
Length = 191
Score = 30.4 bits (67), Expect = 6.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKV 406
EL KSME SSEF S + +SL K EE ++E K+
Sbjct: 98 ELSKSMENYSSEFESAVKESLDCCCSGRKTMEETVTAEEEEKAKL 142
>pir||T01132 hypothetical protein F26B6.8 - Arabidopsis thaliana
gb|AAC23758.1| (AC003040) cyclin-dependent kinase inhibitor protein [Arabidopsis
thaliana]
gb|AAC34660.1| (AF079587) cyclin-dependent kinase inhibitor; ICK1 [Arabidopsis
thaliana]
Length = 191
Score = 30.4 bits (67), Expect = 6.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKV 406
EL KSME SSEF S + +SL K EE ++E K+
Sbjct: 98 ELSKSMENYSSEFESAVKESLDCCCSGRKTMEETVTAEEEEKAKL 142
>sp|P12675|ICAL_PIG CALPAIN INHIBITOR (CALPASTATIN)
pir||A28706 calpastatin, cardiac - pig
gb|AAA31012.1| (M20160) heart calpastatin [Sus scrofa]
Length = 713
Score = 30.4 bits (67), Expect = 6.2
Identities = 20/81 (24%), Positives = 36/81 (43%)
Frame = +2
Query: 227 AQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKV 406
AQ V+K A P E + +EED+ ++L +G K+E E +S E ++
Sbjct: 264 AQSVGVIKSAAAPPHEKKRRVEEDT--MSDQALEALSASLGSRKSEPELDLSSIKEIDEA 321
Query: 407 NPIQDTAEKSSETKPAIPDSF 469
++ +K E +P +
Sbjct: 322 KAKEEKLKKCGEDDETVPPEY 342
>pir||T48401 histone deacetylase-like protein - Arabidopsis thaliana
emb|CAB82939.1| (AL162506) histone deacetylase-like protein [Arabidopsis thaliana]
Length = 296
Score = 30.4 bits (67), Expect = 6.2
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Frame = +2
Query: 221 PPAQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETE 400
PPA K+ +P D ++D GS S + EEE+ T++ ++E
Sbjct: 116 PPAAPKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAESDSE 175
Query: 401 KVNPIQDTAEKSSE----TKPAIPDSFDARTHGAQ 493
+ + D + SSE KP P A + ++
Sbjct: 176 EDDSSDDEEDDSSEEETPKKPEEPKKRSAEPNSSK 210
>sp|O02705|HS9A_PIG HEAT SHOCK PROTEIN HSP 90-ALPHA (HSP 86)
gb|AAC48718.1| (U94395) 90-kDa heat shock protein [Sus scrofa]
Length = 733
Score = 30.4 bits (67), Expect = 6.2
Identities = 19/60 (31%), Positives = 30/60 (49%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKP 451
E +K EE SE + D +G ++ EEEK D K + +K+ E+ ++TKP
Sbjct: 242 EEEKEKEEKESEDKPEIED-----VGSDEEEEEKKDGDKKKKKKIKEKYIDQEELNKTKP 296
>ref|NP_079245.1| hypothetical protein FLJ11703 [Homo sapiens]
ref|XP_016147.1| hypothetical protein FLJ11703 [Homo sapiens]
dbj|BAB13890.1| (AK021765) unnamed protein product [Homo sapiens]
Length = 347
Score = 30.4 bits (67), Expect = 6.2
Identities = 16/62 (25%), Positives = 32/62 (50%)
Frame = +2
Query: 218 DPPAQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDET 397
+P A V + + ++ EED S F S + DS Q + ++++EE+ + ++E
Sbjct: 84 EPQAAVLHLQSAEELDCQGEEEEEEEDGSSFCSGVTDSSTQSLAPSESDEEEEEEEEEEE 143
Query: 398 EK 403
E+
Sbjct: 144 EE 145
>ref|XP_002586.3| zinc finger protein 142 (clone pHZ-49) [Homo sapiens]
Length = 1216
Score = 30.4 bits (67), Expect = 6.2
Identities = 18/49 (36%), Positives = 29/49 (58%), Gaps = 2/49 (4%)
Frame = +2
Query: 263 PMPELDKSMEEDSSEFGSTLP--DSLKQKIGLNKAEEEKADTSKDETEKVN 409
P P+L E S E G+ LP ++ +++ N +EEK+DT KD + V+
Sbjct: 93 PAPKLPPGEREPSQEAGTPLPGQETAEEE---NVEKEEKSDTQKDSQKAVD 140
>ref|NP_116446.1| T98 [Tupaia herpesvirus]
gb|AAK57141.1| (AF281817) T98 [Tupaia herpesvirus]
Length = 572
Score = 30.0 bits (66), Expect = 8.1
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIG-LNKAEEEKADTSKDETE 400
P QVP ++K + L++S + + F + PD + + G + AE A D +
Sbjct: 315 PGQVPELLKPYLSDLLYLNESEQSEVIIFDTDAPDDEESRDGEIGAAEGGAASAKADGGD 374
Query: 401 KVNPIQDTAEKSSETKPAI-PDSFDARTHG 487
+P D + T+PA P F R G
Sbjct: 375 PGDPGGDLGDLGDPTRPASEPPPFSERDDG 404
>gb|AAF56376.1| (AE003750) CG13648 gene product [Drosophila melanogaster]
Length = 2768
Score = 30.0 bits (66), Expect = 8.1
Identities = 16/65 (24%), Positives = 34/65 (51%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKP 451
++DK ++S+E + +S + ++++EE+K + +K P++D+ EK
Sbjct: 1201 KVDKKPIDESAEDKKPIGESEEDSKPIDESEEDKKPVEESAEDK-KPVEDSEEKEKPLPT 1259
Query: 452 AIPDS 466
IP S
Sbjct: 1260 VIPAS 1264
Score = 30.0 bits (66), Expect = 8.1
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEK 403
PA +P +LDK EEDS++ G+ P+S K A E D+
Sbjct: 1342 PASTDEPESSTELPTVDLDKKPEEDSTK-GTEAPESDKVPEVPTSASTENEIEESDKFTT 1400
Query: 404 VNPIQDTAEKSSETKPA-----IPDSFD 472
V P + +A S ET+P +P +F+
Sbjct: 1401 VAPPKISA--SDETEPTAEEDLVPATFE 1426
>gb|AAF68625.1|AF254073_1 (AF254073) histone deacetylase 2 isoform c [Zea mays]
Length = 300
Score = 30.0 bits (66), Expect = 8.1
Identities = 26/88 (29%), Positives = 40/88 (44%), Gaps = 4/88 (4%)
Frame = +2
Query: 218 DPPAQVPRVVKRAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDET 397
D VP VK G + KS E+ + + PDS K K + E+E D+ +DET
Sbjct: 109 DEELNVP-AVKENGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDET 167
Query: 398 ----EKVNPIQDTAEKSSETKPAIPDSFDART 481
E ++P + + S E + + D T
Sbjct: 168 DDSDEGLSPEEGDDDSSDEDDTSDDEEEDTPT 199
>gb|AAF36539.1| (AF174498) GR AF-1 specific protein phosphatase [Homo sapiens]
Length = 1381
Score = 30.0 bits (66), Expect = 8.1
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 16/78 (20%)
Frame = +2
Query: 230 QVPRVVKRAGIPMPELDKS-----------MEEDSSEFGSTLPDSLKQKIGLNK----AE 364
Q+ +++++ G+P P+ DKS ++ S++ T P + K K LN A
Sbjct: 697 QLTQILRKYGVPKPKFDKSKYSKAGKEQHPVKVVSTKRPITKPPA-KDKAVLNSVSRTAL 755
Query: 365 EEKADTSKDET-EKVNPIQDTAEKSSETKPAIPD 463
EK T K ++ EK P + EKS K +P+
Sbjct: 756 SEKKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 789
>pir||H72512 hypothetical protein APE2077 - Aeropyrum pernix (strain K1)
dbj|BAA81088.1| (AP000063) 242aa long hypothetical protein [Aeropyrum pernix]
Length = 242
Score = 30.0 bits (66), Expect = 8.1
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = -2
Query: 337 FKRIRESRAEFRAILFHALVQFWHRYTSPFNNPGNLS-----RRIVPSASLGYRGL 185
F+ ES A A L +++V+ W SP+ PG LS + I+ S ++ YRGL
Sbjct: 182 FEEAEESLAA--AGLGYSIVEEWGSTRSPYEPPGGLSGLFSDKDILASITIAYRGL 235
>pir||T16368 hypothetical protein F45E12.2 - Caenorhabditis elegans
gb|AAA68790.1| (U29536) similar to transcription initiation factor IIB
[Caenorhabditis elegans]
Length = 759
Score = 30.0 bits (66), Expect = 8.1
Identities = 18/65 (27%), Positives = 32/65 (48%)
Frame = +2
Query: 251 RAGIPMPELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAE 430
R P P S++ DSS+ PD+L + + + + ++ S+ +K+ I D E
Sbjct: 537 RESTPAPVTPISIKVDSSD---VTPDTLSKSEKIARGKNIRSQASESTIQKLRSIFDLTE 593
Query: 431 KSSET 445
+ SET
Sbjct: 594 ECSET 598
>gb|AAF55629.2| (AE003724) CG6026 gene product [Drosophila melanogaster]
Length = 1542
Score = 30.0 bits (66), Expect = 8.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 314 STLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKPAIPDSFDARTHG 487
ST ++ +K +N+A+ E + K E E Q TA + KP+ DSF + G
Sbjct: 1342 STTDQAIYEKNNINRADVETTEQKKPEEE-----QPTASALTAEKPSEMDSFQPQLQG 1394
>gb|AAH05470.1|AAH05470 (BC005470) Similar to ubiquitin specific protease 11 [Mus musculus]
Length = 699
Score = 30.0 bits (66), Expect = 8.1
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 272 ELDKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKP 451
E D S EE+ E + + G +AE+E+A TS TE+ + D + ++S+ P
Sbjct: 392 EDDSSSEEEKEEMSAPTVND-----GTREAEQEQAGTSSGVTERCPSLLDNSLRASQWPP 446
>dbj|BAB07160.1| (AP001518) L-arabinose ABC transporter (ATP-binding protein)
[Bacillus halodurans]
Length = 517
Score = 30.0 bits (66), Expect = 8.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 293 EDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETKPAI 457
ED +G L D +K I L E+ + D+T +V +D +K + P+I
Sbjct: 350 EDRKTYGLILIDDIKHNISLTSLEKLSKNGVVDKTREVKEAEDFRKKMNIRTPSI 404
>gb|AAF81929.1|AF107291_1 (AF107291) elongation factor 2 [Candida parapsilosis]
Length = 813
Score = 30.0 bits (66), Expect = 8.1
Identities = 20/38 (52%), Positives = 23/38 (59%), Gaps = 4/38 (10%)
Frame = +2
Query: 314 STLPDSLKQKIGLNKA----EEEKADTSKDETEKVNPIQDTA 427
STL DSL QK G+ A E DT KDE E+ I+ TA
Sbjct: 17 STLTDSLVQKAGIISAGKAGEARFMDTRKDEQERGITIKSTA 58
>dbj|BAA24352.1| (AB000279) Pol-like peptide [Alternaria alternata]
Length = 551
Score = 30.0 bits (66), Expect = 8.1
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Frame = +2
Query: 209 AGNDPPAQVPRVVKRAGIPMPEL---DKSMEEDSSEFG-STLPDSLKQKIGLNKAEEEKA 376
+G D ++ P A + +PEL DK++ + S F S + D++++++ EE+
Sbjct: 421 SGYDASSEAP-----ARVLLPELRFSDKALADIQSWFKKSPVSDNIRKRL------EEQF 469
Query: 377 DTSKDETEKVNPIQDTAEKSSETKPAIPDSFD 472
S+++ +P+QD S +T P +FD
Sbjct: 470 AKSENQNSSPDPVQDPIHPSVKTLPRTRVNFD 501
>gb|AAC02578.1| (AF045641) Hypothetical protein F53H1.4 [Caenorhabditis elegans]
Length = 1378
Score = 30.0 bits (66), Expect = 8.1
Identities = 17/57 (29%), Positives = 28/57 (48%)
Frame = +2
Query: 278 DKSMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDETEKVNPIQDTAEKSSETK 448
+K E+D E +Q+ K EEEKA K++ EK+ ++ A + +E K
Sbjct: 238 EKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAEKK 294
>pir||B34457 204 protein - mouse
Length = 647
Score = 30.0 bits (66), Expect = 8.1
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +2
Query: 230 QVPRVVKRAGIPMPELDK-----SMEEDSSEFGSTLPDSLKQKIGLNKAEEEKADTSKDE 394
+VP + KRA I E + S+E++ E G P S + ++ E A +++E
Sbjct: 71 EVPALRKRAEILKKERSEVTGETSLEKNGQEAGPATPTSTTSHMLASERGETSA--TQEE 128
Query: 395 TEKVNPIQDTAEKSSETKPAIPDSFDARTHGAQ 493
T TA+ + T A + ART AQ
Sbjct: 129 TSTAQAGTSTAQAGTSTAQARTSTAQARTSTAQ 161
>gb|AAF81925.1|AF107287_1 (AF107287) elongation factor 2 [Candida glabrata]
Length = 814
Score = 30.0 bits (66), Expect = 8.1
Identities = 20/38 (52%), Positives = 23/38 (59%), Gaps = 4/38 (10%)
Frame = +2
Query: 314 STLPDSLKQKIGLNKA----EEEKADTSKDETEKVNPIQDTA 427
STL DSL QK G+ A E DT KDE E+ I+ TA
Sbjct: 19 STLTDSLVQKAGIISAAKAGEARFMDTRKDEQERGITIKSTA 60
>pir||S70962 regulatory protein RAG3 - yeast (Kluyveromyces marxianus var.
lactis)
emb|CAA49737.1| (X70186) RAG3 [Kluyveromyces lactis]
Length = 765
Score = 30.0 bits (66), Expect = 8.1
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 224 PAQVPRVVKRAGIPMPELDKSMEEDSSE-FGSTLPDSL---KQKIGLNKAEEEKADTSKD 391
P VP + +G+ + + + ++ ++ + FG+ L ++ G+N A EKA+
Sbjct: 524 PTIVPGNNENSGVKISTVSELIDNNTEDIFGNMLDNNFFPDDMLTGINNAISEKANPGAV 583
Query: 392 ETEKVNPIQDTAEKSSETKP 451
ET P D +E+S+ P
Sbjct: 584 ETNVSLPSADVSEESNNNTP 603
>ref|NP_012897.1| Large subunit of transcription factor tfIIE; Tfa1p [Saccharomyces
cerevisiae]
sp|P36100|T2EA_YEAST TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT (TFIIE-ALPHA)
(TRANSCRIPTION FACTOR A LARGE SUBUNIT) (FACTOR A 66 KD
SUBUNIT)
pir||S37845 transcription initiation factor IIE chain TFA1 - yeast
(Saccharomyces cerevisiae)
emb|CAA81863.1| (Z28028) ORF YKL028w [Saccharomyces cerevisiae]
gb|AAA62665.1| (U12825) transcription factor TFIIE, large subunit [Saccharomyces
cerevisiae]
Length = 482
Score = 30.0 bits (66), Expect = 8.1
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Frame = +2
Query: 278 DKSMEEDSSEFGSTLPDSL----KQKIGLNKAEEEKADTSKD-ETEKVNPIQDTAEKSSE 442
++ MEE +E TL D K++ LNK EEE+ + +D E E+ ++D + + E
Sbjct: 345 EQEMEERENE--KTLNDYYAALAKKQAKLNKEEEEEEEEEEDEEEEEEEEMEDVMDDNDE 402
Query: 443 T--KPAIPDSFDARTHGA 490
T + A+ D F+ T A
Sbjct: 403 TARENALEDEFEDVTDTA 420
>pir||T00390 KIAA0614 protein - human (fragment)
dbj|BAA31589.1| (AB014514) KIAA0614 protein [Homo sapiens]
Length = 1630
Score = 30.0 bits (66), Expect = 8.1
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 16/78 (20%)
Frame = +2
Query: 230 QVPRVVKRAGIPMPELDKS-----------MEEDSSEFGSTLPDSLKQKIGLNK----AE 364
Q+ +++++ G+P P+ DKS ++ S++ T P + K K LN A
Sbjct: 946 QLTQILRKYGVPKPKFDKSKYSKAGKEQHPVKVVSTKRPITKPPA-KDKAVLNSVSRTAL 1004
Query: 365 EEKADTSKDET-EKVNPIQDTAEKSSETKPAIPD 463
EK T K ++ EK P + EKS K +P+
Sbjct: 1005 SEKKPTVKPKSPEKSKPDEKDPEKSPTKKQEVPE 1038
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183,801,379
Number of Sequences: 705144
Number of extensions: 3172541
Number of successful extensions: 13532
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 12485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13414
length of database: 222,175,239
effective HSP length: 109
effective length of database: 145,314,543
effective search space used: 7992299865
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)