The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.1 [Apr-13-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1605_G05_M09ZS5.seq 1605_G05_M09ZS5 0 0 0 1 479
(468 letters)
Database: nr
705,144 sequences; 222,175,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB42942.1| (AP003135) conserved hypothetical protein [... 37 0.057
sp|P32815|YGL5_BACST HYPOTHETICAL PROTEIN IN GLDA 3'REGION ... 31 3.1
pir||T34264 hypothetical protein F46C8.4 - Caenorhabditis e... 31 3.1
pir||T29517 hypothetical protein T25F10.3 - Caenorhabditis ... 31 3.1
gb|AAF99959.1| (U28735) Hypothetical protein F48E3.8 [Caeno... 31 3.1
gb|AAF51000.1| (AE003576) CG15637 gene product [Drosophila ... 30 5.3
dbj|BAA76781.1| (AB023154) KIAA0937 protein [Homo sapiens] 30 5.3
gb|AAF65193.1|AF184236_1 (AF184236) deltex 2 [Gallus gallus] 30 6.9
pir||A57293 latent transforming growth factor beta-binding ... 24 8.7
sp|P32784|SCT1_YEAST CTR1 SUPPRESSOR PROTEIN >gi|1084847|pi... 30 9.1
dbj|BAB08580.1| (AB010071) gene_id:MCO15.6~unknown protein ... 30 9.1
>dbj|BAB42942.1| (AP003135) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB58018.1| (AP003363) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 375
Score = 37.0 bits (84), Expect = 0.057
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 12/80 (15%)
Frame = +3
Query: 51 YTYCAEVLKAMPDKPWSDDQLSSAY---------CKTPNAVCNGQSPASKVDNALFICLC 203
+TY E+L ++P +P DD L + C T V NGQ + K + L
Sbjct: 166 WTYLGEMLVSIPFEP--DDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTKG 223
Query: 204 AQPDQ---KVGDHIELLCGCDTCLNVGPDFRG 290
PDQ K+G+ L GCDTC V P RG
Sbjct: 224 YMPDQYRYKIGNR---LYGCDTCQQVCPKNRG 252
>sp|P32815|YGL5_BACST HYPOTHETICAL PROTEIN IN GLDA 3'REGION (ORF5)
pir||PQ0299 hypothetical protein 5 (gldA 3' region) - Bacillus
stearothermophilus (fragment)
gb|AAA22480.1| (M65289) ORF5; This ORF includes a region (aa23-103) containing a
potential iron-sulphur centre homologous to a region of
Rhodospirillum rubrum and Chromatium vinosum; putative
[Bacillus stearothermophilus]
Length = 216
Score = 31.2 bits (69), Expect = 3.1
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +3
Query: 51 YTYCAEVLKAMPDKPWS--DDQLSSAY-----CKTPNAVCNGQSPASKVDNALFICLCAQ 209
Y Y E++ +P P S +D+ S C T V GQ + K L
Sbjct: 5 YVYLGEMITNIPFPPDSPIEDRCGSCNICVDSCPTGALVQGGQLDSKKCIAFLTQTKGFL 64
Query: 210 PDQKVGDHIELLCGCDTCLNVGPDFRGR 293
PD+ G L GCDTC V P+ +G+
Sbjct: 65 PDEYRGKIGNRLYGCDTCQLVCPENKGK 92
>pir||T34264 hypothetical protein F46C8.4 - Caenorhabditis elegans
Length = 2195
Score = 31.2 bits (69), Expect = 3.1
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 39 CECGYTYCAEVLKAMPDKPWSDDQLSSAYCKTPNAVCNGQSPASKVDNALFICLCAQPDQ 218
C+CG + A + + K + L+ Y P +C GQS K +C C QPD
Sbjct: 789 CQCGIGFVASMDVCVLRKTGKPNFLTPGYLCNPEDICTGQSVCIK-----GVCQC-QPDY 842
Query: 219 K 221
K
Sbjct: 843 K 843
>pir||T29517 hypothetical protein T25F10.3 - Caenorhabditis elegans
gb|AAB04985.1| (U64856) coded for by C. elegans cDNA yk46e10.5; contain
similarity to EGF-like domains (PS:PS00022)
[Caenorhabditis elegans]
Length = 409
Score = 31.2 bits (69), Expect = 3.1
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 24/71 (33%)
Frame = +3
Query: 93 PWSDDQLSSAYCKTPNAVCNGQSPASKVDNALFICLCAQPD-----QKVGDHIELLCGCD 257
P ++ Q +C+ A NG + + C C QP +K+ D ++L G D
Sbjct: 111 PDAEQQQLDQHCRQLPACQNGGYRSQSIGRR---CSCPQPYFGEYCEKLCDQGQVLAGID 167
Query: 258 -------------------TCLNVGPDFRGRCKSP 305
CLN G +FRGRC P
Sbjct: 168 GNNYCSCLPFYQGETCSDLVCLNGGHEFRGRCSCP 202
>gb|AAF99959.1| (U28735) Hypothetical protein F48E3.8 [Caenorhabditis elegans]
Length = 2475
Score = 31.2 bits (69), Expect = 3.1
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +3
Query: 39 CECGYTYCAEVLKAMPDKPWSDDQLSSAYCKTPNAVCNGQSPASKVDNALFICLCAQPDQ 218
C+CG + A + + K + L+ Y P +C GQS K +C C QPD
Sbjct: 721 CQCGIGFVASMDVCVLRKTGKPNFLTPGYLCNPEDICTGQSVCIK-----GVCQC-QPDY 774
Query: 219 K 221
K
Sbjct: 775 K 775
>gb|AAF51000.1| (AE003576) CG15637 gene product [Drosophila melanogaster]
Length = 3680
Score = 30.4 bits (67), Expect = 5.3
Identities = 30/97 (30%), Positives = 46/97 (46%), Gaps = 19/97 (19%)
Frame = +3
Query: 21 TPXGPICECGYTYCAEVLKAMPDKPWSDDQLSSAYCKTPNAVCNG---QSPAS------- 170
TP GP+C+C + + K+ +P A C N +C G Q+P
Sbjct: 1728 TPEGPVCKCPPLFVGDA-KSGGCRPDGQCPNGDADCPA-NTICAGGVCQNPCDNACGSNA 1785
Query: 171 --KVDNALFICLCAQPDQKVGDHIELLCG-----CDTCLNVGPD--FRGRCKSPCR 311
KV N +C C Q + D + C C T ++ G + G+C+ CR
Sbjct: 1786 ECKVINRKPVCSCPLRFQPISDTAKDGCARTISKCLTDVDCGGALCYNGQCRIACR 1841
>dbj|BAA76781.1| (AB023154) KIAA0937 protein [Homo sapiens]
Length = 653
Score = 30.4 bits (67), Expect = 5.3
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +3
Query: 18 PTPXGPICECGYTYCAEVLKAMPDKPWSDDQLSSAYCKTPNAVCNGQSPASKVD 179
P G + CG+ Y L AM + D L CKT V G P K++
Sbjct: 465 PDLVGKLSRCGHVYHIYCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKME 518
>gb|AAF65193.1|AF184236_1 (AF184236) deltex 2 [Gallus gallus]
Length = 403
Score = 30.0 bits (66), Expect = 6.9
Identities = 16/54 (29%), Positives = 23/54 (41%)
Frame = +3
Query: 18 PTPXGPICECGYTYCAEVLKAMPDKPWSDDQLSSAYCKTPNAVCNGQSPASKVD 179
P G + +CG+ + L AM + D L CKT V G P K++
Sbjct: 215 PDLVGKLAKCGHIFHLHCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGKME 268
>pir||A57293 latent transforming growth factor beta-binding protein 3 precursor -
mouse
Length = 1251
Score = 24.3 bits (51), Expect(2) = 8.7
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 120 AYCKTPNAVCNGQSPASKVDNALFICLCAQPDQKVGDHIELLCGCDTCLNVGPDFRGRCK 299
A C+ P S A VD I C + +Q+ LLC + C+N FR CK
Sbjct: 1165 AVCECPGGFQLDASRARCVD----IDECRELNQR-----GLLCKSERCVNTSGSFRCVCK 1215
Query: 300 S 302
+
Sbjct: 1216 A 1216
Score = 23.9 bits (50), Expect(2) = 8.7
Identities = 7/13 (53%), Positives = 8/13 (60%)
Frame = +3
Query: 9 PAAPTPXGPICEC 47
P P P G +CEC
Sbjct: 1157 PCVPRPGGAVCEC 1169
>sp|P32784|SCT1_YEAST CTR1 SUPPRESSOR PROTEIN
pir||JC4182 SCT 1 protein - yeast (Saccharomyces cerevisiae)
dbj|BAA07409.1| (D38256) suppressor of ctr mutation [Saccharomyces cerevisiae]
Length = 759
Score = 29.6 bits (65), Expect = 9.1
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 283 KSGPTLRHVSQPHRSSM*SPTFWSGWAQRQMNRALSTLLAGDCPLQTALGVL 128
+ GP + V++PH + P G ++ +NR +S L+A Q A+G L
Sbjct: 79 QQGPVI-FVARPHANQFVDPVILMGEVKKSVNRRVSFLIAESSLKQPAIGFL 129
>dbj|BAB08580.1| (AB010071) gene_id:MCO15.6~unknown protein [Arabidopsis thaliana]
Length = 163
Score = 29.6 bits (65), Expect = 9.1
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Frame = +3
Query: 144 VCNGQSPASKVDNALFIC-----LCAQPDQKVGDHIELLCGCDTCLNVGPDFR--GRCKS 302
V G+ P ++ NA C +C+ D G + + C + C+++ D + G CK+
Sbjct: 60 VDKGKEPKARNPNAADHCNKDNEICSSSDYSTGANATMACCNNKCMDLSTDDKNCGLCKN 119
Query: 303 PCR 311
C+
Sbjct: 120 KCK 122
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170,088,478
Number of Sequences: 705144
Number of extensions: 3113999
Number of successful extensions: 7591
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7584
length of database: 222,175,239
effective HSP length: 108
effective length of database: 146,019,687
effective search space used: 6862925289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)