Score E
Sequences producing significant alignments: (bits) Value
gb|AAD37948.1| (AF143305) pre-C/C protein [Hepatitis B virus] 34 0.25
gb|AAA62813.1| (M38454) core antigen [Hepatitis B virus] 33 0.42
emb|CAA26537.1| (X02763) core antigen (aa 1-185) [Hepatitis... 33 0.55
emb|CAA96554.1| (Z72478) HBcAg [Hepatitis B virus] >gi|3892... 33 0.55
sp|P03148|CORA_HPBV2 CORE ANTIGEN 33 0.55
gb|AAD37918.1| (AF143298) pre-C/C protein [Hepatitis B virus] 33 0.55
sp|P03149|CORA_HPBVW CORE ANTIGEN 33 0.55
pir||NKVLA6 e antigen precursor / core antigen - hepatitis ... 33 0.55
gb|AAK57204.1| (AF350087) precore/core protein [Hepatitis B... 33 0.55
pir||NKVLA3 e antigen precursor / core antigen - hepatitis ... 33 0.55
sp|P17099|CORA_HPBV9 CORE ANTIGEN >gi|73596|pir||NKVLKS e a... 33 0.55
pir||S47409 e antigen precursor / core antigen - hepatitis ... 33 0.55
pir||S01405 core antigen - hepatitis B virus >gi|59447|emb|... 33 0.55
gb|AAK57200.1| (AF350083) precore/core protein [Hepatitis B... 33 0.55
gb|AAD40210.1|AF090840_3 (AF090840) precore+core [Hepatitis... 33 0.55
gb|AAA45492.1| (M74501) B1 wild-type molecule; ORF1 [Hepati... 33 0.55
dbj|BAA32870.1| (AB014370) precore/core protein [Hepatitis ... 33 0.55
gb|AAA69681.2| (M57663) core antigen [Hepatitis B virus] 33 0.55
gb|AAK57197.1| (AF350080) precore/core protein [Hepatitis B... 33 0.55
gb|AAB35291.1| precore {precore/core region} [hepatitis B v... 33 0.55
gb|AAK57203.1| (AF350086) precore/core protein [Hepatitis B... 33 0.55
gb|AAD37944.1| (AF143304) pre-C/C protein [Hepatitis B virus] 33 0.55
gb|AAD37931.1| (AF143301) pre-C/C protein [Hepatitis B virus] 33 0.55
pir||S33686 e antigen precursor / core antigen - hepatitis ... 33 0.55
emb|CAC28101.2| (AJ307410) COX3 protein [Yarrowia lipolytica] 32 0.71
gb|AAD37935.1| (AF143302) pre-C/C protein [Hepatitis B virus] 32 0.71
gb|AAD37923.1| (AF143299) pre-C/C protein [Hepatitis B virus] 32 0.71
gb|AAF51018.2| (AE003576) l(2)k05819 gene product [Drosophi... 32 0.93
sp|P79295|MIS_PIG MUELLERIAN INHIBITING FACTOR PRECURSOR (M... 32 1.2
dbj|BAB21544.1| (AB022782) hydroxyproline-rich glycoprotein... 31 1.6
pir||T47618 extensin-like protein T14E10.160 [imported] - A... 31 1.6
emb|CAB77579.2| (AL138656) extensin precursor-like protein ... 31 1.6
gb|AAD37928.1| (AF143300) pre-C/C protein [Hepatitis B virus] 31 1.6
gb|AAD37961.1| (AF143308) pre-C/C protein [Hepatitis B virus] 31 2.1
emb|CAA92248.1| (Z68141) e antigen precursor [Hepatitis B v... 30 3.5
ref|NP_037580.1| ORF1 [Diaporthe ambigua RNA virus 1] >gi|6... 30 3.5
ref|NP_074915.1| cytochrome c oxidase subunit 3 [Podospora ... 30 3.5
emb|CAA92245.1| (Z68139) nucleocapsid protein [Hepatitis B ... 30 3.5
emb|CAA92249.1| (Z68141) nucleocapsid protein [Hepatitis B ... 30 3.5
pir||T47617 extensin-like protein T14E10.150 [imported] - A... 30 3.5
sp|P00422|COX3_NEUCR CYTOCHROME C OXIDASE POLYPEPTIDE III >... 30 4.6
sp|Q95840|COX3_MAGGR CYTOCHROME C OXIDASE POLYPEPTIDE III >... 30 4.6
gb|AAD37940.1| (AF143303) pre-C/C protein [Hepatitis B virus] 30 4.6
gb|AAK57198.1| (AF350081) precore/core protein [Hepatitis B... 30 4.6
pir||H82175 multidrug resistance protein VC1634 [imported] ... 29 6.1
pir||S53288 core antigen - hepatitis B virus (isolate patie... 29 6.1
gb|AAK59390.1| (AY034878) core protein [Hepatitis B virus] 29 6.1
emb|CAC10630.1| (AJ389684) gamma-gliadin [Aegilops tauschii] 29 6.1
gb|AAD22170.1|AF061282_24 (AF061282) patatin-like protein [... 29 6.1
dbj|BAB27164.1| (AK010759) putative [Mus musculus] 29 6.1
emb|CAC10628.1| (AJ389682) gamma-gliadin [Aegilops tauschii] 29 6.1
sp|P20799|N12A_PEA EARLY NODULIN 12A PRECURSOR (N-12A) >gi|... 29 6.1
gb|AAD37957.1| (AF143307) pre-C/C protein [Hepatitis B virus] 29 7.9
>gb|AAD37948.1| (AF143305) pre-C/C protein [Hepatitis B virus]
Length = 205
Score = 33.9 bits (76), Expect = 0.25
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS P ETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILSTPP----ETTVVRRRNRGRSPRRRTPSRRRR 197
>gb|AAA62813.1| (M38454) core antigen [Hepatitis B virus]
Length = 185
Score = 33.1 bits (74), Expect = 0.42
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 125 WIRTP--PAYRPPNAPILST----LPETTVVRRXXRGRSPRRRTPSPRRR 168
>emb|CAA26537.1| (X02763) core antigen (aa 1-185) [Hepatitis B virus]
Length = 185
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 125 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 168
>emb|CAA96554.1| (Z72478) HBcAg [Hepatitis B virus]
emb|CAA09961.1| (AJ012207) core protein [Hepatitis B virus]
Length = 185
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 125 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 168
>sp|P03148|CORA_HPBV2 CORE ANTIGEN
Length = 185
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 125 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 168
>gb|AAD37918.1| (AF143298) pre-C/C protein [Hepatitis B virus]
Length = 193
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 133 WIRTP--PAYRPPNAPILST----IPETTVVRRRDRGRSPRRRTPSPRRR 176
>sp|P03149|CORA_HPBVW CORE ANTIGEN
Length = 185
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 125 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 168
>pir||NKVLA6 e antigen precursor / core antigen - hepatitis B virus (subtype
adw)
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>gb|AAK57204.1| (AF350087) precore/core protein [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>pir||NKVLA3 e antigen precursor / core antigen - hepatitis B virus (subtype
adw2)
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>sp|P17099|CORA_HPBV9 CORE ANTIGEN
pir||NKVLKS e antigen precursor / core antigen - hepatitis B virus (subtype
adw, strain 991)
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>pir||S47409 e antigen precursor / core antigen - hepatitis B virus (subtype
adw2)
emb|CAA84790.1| (Z35717) core protein [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>pir||S01405 core antigen - hepatitis B virus
emb|CAA30747.1| (X07911) nucleocapsid protein (AA 1-214) [Hepatitis B virus]
gb|AAC31755.1| (L13994) preC [Hepatitis B virus]
emb|CAA96555.1| (Z72478) HBeAg [Hepatitis B virus]
emb|CAA36232.1| (X51970) C gene product (AA 1-214) [Hepatitis B virus]
gb|AAD40206.1|AF090839_3 (AF090839) precore+core [Hepatitis B virus]
gb|AAD40214.1|AF090841_3 (AF090841) precore+core [Hepatitis B virus]
gb|AAK58872.1| (AF305422) precore+core [synthetic construct]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>gb|AAK57200.1| (AF350083) precore/core protein [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>gb|AAD40210.1|AF090840_3 (AF090840) precore+core [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>gb|AAA45492.1| (M74501) B1 wild-type molecule; ORF1 [Hepatitis B virus]
gb|AAD40218.1|AF090842_3 (AF090842) precore+core [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>dbj|BAA32870.1| (AB014370) precore/core protein [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>gb|AAA69681.2| (M57663) core antigen [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>gb|AAK57197.1| (AF350080) precore/core protein [Hepatitis B virus]
gb|AAK57199.1| (AF350082) precore/core protein [Hepatitis B virus]
gb|AAK57201.1| (AF350084) precore/core protein [Hepatitis B virus]
gb|AAK57202.1| (AF350085) precore/core protein [Hepatitis B virus]
gb|AAK57205.1| (AF350088) precore/core protein [Hepatitis B virus]
gb|AAK57206.1| (AF350089) precore/core protein [Hepatitis B virus]
gb|AAK57207.1| (AF350090) precore/core protein [Hepatitis B virus]
gb|AAK57208.1| (AF350091) precore/core protein [Hepatitis B virus]
gb|AAK57209.1| (AF350092) precore/core protein [Hepatitis B virus]
gb|AAK57210.1| (AF350093) precore/core protein [Hepatitis B virus]
gb|AAK57211.1| (AF350094) precore/core protein [Hepatitis B virus]
gb|AAK57212.1| (AF350095) precore/core protein [Hepatitis B virus]
gb|AAK57213.1| (AF350096) precore/core protein [Hepatitis B virus]
gb|AAK57214.1| (AF350097) precore/core protein [Hepatitis B virus]
gb|AAK57215.1| (AF350098) precore/core protein [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>gb|AAB35291.1| precore {precore/core region} [hepatitis B virus HBV, chronic
hepatitis and immune complex disease patient, second
liver biopsy isolate, Peptide Partial Mutant, 203 aa]
Length = 203
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 153 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 196
>gb|AAK57203.1| (AF350086) precore/core protein [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>gb|AAD37944.1| (AF143304) pre-C/C protein [Hepatitis B virus]
Length = 206
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 146 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 189
>gb|AAD37931.1| (AF143301) pre-C/C protein [Hepatitis B virus]
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>pir||S33686 e antigen precursor / core antigen - hepatitis B virus (subtype
adw2, patient A938)
Length = 214
Score = 32.7 bits (73), Expect = 0.55
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>emb|CAC28101.2| (AJ307410) COX3 protein [Yarrowia lipolytica]
Length = 268
Score = 32.3 bits (72), Expect = 0.71
Identities = 13/55 (23%), Positives = 33/55 (59%)
Frame = +1
Query: 166 VVLNCIIKTLTVWRIFSFWASHRSHQAWQRRLREYFGFITEVWVFRALVDWSLWG 330
+++ I+ +++WRI+++ ++ H ++ + Y+ F+ VW+F +V + WG
Sbjct: 215 IIIGIIMLGVSLWRIYTYQLTNNHHVGYETSIL-YYHFVDVVWLFLYIV-FYWWG 267
>gb|AAD37935.1| (AF143302) pre-C/C protein [Hepatitis B virus]
Length = 184
Score = 32.3 bits (72), Expect = 0.71
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS P ETT+ R R P+R+ P R+R
Sbjct: 124 WIRTP--PAYRPPNAPILSTPP----ETTVVRRRDRGRSPRRRTPSPRRR 167
>gb|AAD37923.1| (AF143299) pre-C/C protein [Hepatitis B virus]
Length = 180
Score = 32.3 bits (72), Expect = 0.71
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS P ETT+ R R P+R+ P R+R
Sbjct: 120 WIRTP--PAYRPPNAPILSTPP----ETTVVRRRDRGRSPRRRTPSPRRR 163
>gb|AAF51018.2| (AE003576) l(2)k05819 gene product [Drosophila melanogaster]
Length = 1444
Score = 32.0 bits (71), Expect = 0.93
Identities = 21/64 (32%), Positives = 25/64 (38%)
Frame = +1
Query: 175 NCIIKTLTVWRIFSFWASHRSHQAWQRRLREYFGFITEVWVFRALVDWSLWGLIPFVDVF 354
NCII S HR H WQR F +W F L + G+I FV +
Sbjct: 1357 NCIIPVF-----ISVTFVHRDHALWQRN-----PFTNRIWAFTCLFLVLIHGIICFVQLL 1406
Query: 355 LSAF 366
L F
Sbjct: 1407 LEDF 1410
>sp|P79295|MIS_PIG MUELLERIAN INHIBITING FACTOR PRECURSOR (MIS) (ANTI-MUELLERIAN
HORMONE) (AMH) (MULLERIAN INHIBITING SUBSTANCE)
pir||T11753 mullerian inhibiting factor precursor - pig
gb|AAC25968.1| (U80853) mullerian inhibitory substance [Sus scrofa]
Length = 575
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -1
Query: 303 PKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKRLD 184
P+ P S +P + TL RL+RA+RGP + PP LD
Sbjct: 294 PEEPLPSTDPFL---ETLTRLVRALRGPPARIPPPSLALD 330
>dbj|BAB21544.1| (AB022782) hydroxyproline-rich glycoprotein [Arabidopsis thaliana]
Length = 300
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/86 (25%), Positives = 33/86 (37%), Gaps = 1/86 (1%)
Frame = -1
Query: 339 WYETP*TP-VHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKRLDDTV*HHY 163
+Y++P P V+ P PY S PK++ ++ P K PPH H
Sbjct: 174 YYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYYSPSPKVYYKSPPH---------PHV 224
Query: 162 FFCPPELSRQLVENQQPKCLEPADAIL 82
CPP P C P+ ++
Sbjct: 225 CVCPP----------PPPCYSPSPKVV 241
>pir||T47618 extensin-like protein T14E10.160 [imported] - Arabidopsis thaliana
Length = 733
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/86 (25%), Positives = 33/86 (37%), Gaps = 1/86 (1%)
Frame = -1
Query: 339 WYETP*TP-VHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKRLDDTV*HHY 163
+Y++P P V+ P PY S PK++ ++ P K PPH H
Sbjct: 607 YYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYYSPSPKVYYKSPPH---------PHV 657
Query: 162 FFCPPELSRQLVENQQPKCLEPADAIL 82
CPP P C P+ ++
Sbjct: 658 CVCPP----------PPPCYSPSPKVV 674
>emb|CAB77579.2| (AL138656) extensin precursor-like protein [Arabidopsis thaliana]
Length = 743
Score = 31.2 bits (69), Expect = 1.6
Identities = 22/86 (25%), Positives = 33/86 (37%), Gaps = 1/86 (1%)
Frame = -1
Query: 339 WYETP*TP-VHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKRLDDTV*HHY 163
+Y++P P V+ P PY S PK++ ++ P K PPH H
Sbjct: 617 YYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYYSPSPKVYYKSPPH---------PHV 667
Query: 162 FFCPPELSRQLVENQQPKCLEPADAIL 82
CPP P C P+ ++
Sbjct: 668 CVCPP----------PPPCYSPSPKVV 684
>gb|AAD37928.1| (AF143300) pre-C/C protein [Hepatitis B virus]
Length = 174
Score = 31.2 bits (69), Expect = 1.6
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS P +TT+ R R P+R+ P R+R
Sbjct: 114 WIRTP--PAYRPPNAPILSTPP----QTTVVRRRDRGRSPRRRTPSPRRR 157
>gb|AAD37961.1| (AF143308) pre-C/C protein [Hepatitis B virus]
Length = 212
Score = 30.8 bits (68), Expect = 2.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PET + R R P+R+ P R+R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETAVVRRRDRGRSPRRRTPSPRRR 197
>emb|CAA92248.1| (Z68141) e antigen precursor [Hepatitis B virus]
Length = 195
Score = 30.0 bits (66), Expect = 3.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHR 196
W TP P ++ P P LS PETT+ R R P+R+ P R
Sbjct: 154 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPR 195
>ref|NP_037580.1| ORF1 [Diaporthe ambigua RNA virus 1]
gb|AAF22957.1|AF142094_1 (AF142094) ORF1 [Diaporthe ambigua RNA virus 1]
Length = 503
Score = 30.0 bits (66), Expect = 3.5
Identities = 19/60 (31%), Positives = 26/60 (42%)
Frame = +1
Query: 184 IKTLTVWRIFSFWASHRSHQAWQRRLREYFGFITEVWVFRALVDWSLWGLIPFVDVFLSA 363
I LT F WA+ AW + G + V V+W +GL PFV F+S+
Sbjct: 62 IAWLTTLIYFHLWATAFVAVAW------FLGVVMLVRAILRFVEWFTFGLAPFVGGFVSS 115
>ref|NP_074915.1| cytochrome c oxidase subunit 3 [Podospora anserina]
sp|Q02654|COX3_PODAN CYTOCHROME C OXIDASE POLYPEPTIDE III
pir||S06029 cytochrome-c oxidase (EC 1.9.3.1) chain III - Podospora anserina
mitochondrion
emb|CAA32858.1| (X14734) COIII (AA 1-270) [Podospora anserina]
emb|CAA38768.1| (X55026) cytochrome oxidase c subunit 3 [Podospora anserina]
Length = 269
Score = 30.0 bits (66), Expect = 3.5
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 166 VVLNCIIKTLTVWRIFSFWASHRSHQAWQRRLREYFGFITEVWVFRALVDWSLWG 330
V++ I + +WRIF++ + H ++ + Y+ F+ VW+F V WG
Sbjct: 216 VIIGTIFLAVALWRIFAYHLTDNHHVGFEGGIL-YWHFVDVVWLF-LYVSIYYWG 268
>emb|CAA92245.1| (Z68139) nucleocapsid protein [Hepatitis B virus]
Length = 166
Score = 30.0 bits (66), Expect = 3.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHR 196
W TP P ++ P P LS PETT+ R R P+R+ P R
Sbjct: 125 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPR 166
>emb|CAA92249.1| (Z68141) nucleocapsid protein [Hepatitis B virus]
Length = 166
Score = 30.0 bits (66), Expect = 3.5
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHR 196
W TP P ++ P P LS PETT+ R R P+R+ P R
Sbjct: 125 WIRTP--PAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPR 166
>pir||T47617 extensin-like protein T14E10.150 [imported] - Arabidopsis thaliana
emb|CAB77578.1| (AL138656) extensin precursor-like protein [Arabidopsis thaliana]
Length = 951
Score = 30.0 bits (66), Expect = 3.5
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
Frame = -1
Query: 339 WYETP*TP-VHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKRLDDTV*HHY 163
+Y++P P V+ P PY S PK++ ++ P + + P P + H
Sbjct: 633 YYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYKSPPHPHV 692
Query: 162 FFCPPELSRQLVENQQPKCLEPADAIL 82
CPP P C P+ ++
Sbjct: 693 CVCPP----------PPPCYSPSPKVV 709
>sp|P00422|COX3_NEUCR CYTOCHROME C OXIDASE POLYPEPTIDE III
pir||OTNC3 cytochrome-c oxidase (EC 1.9.3.1) chain III - Neurospora crassa
mitochondrion
emb|CAA24041.1| (V00668) reading frame oxidase subunit III [Neurospora crassa]
Length = 269
Score = 29.6 bits (65), Expect = 4.6
Identities = 12/45 (26%), Positives = 25/45 (54%)
Frame = +1
Query: 166 VVLNCIIKTLTVWRIFSFWASHRSHQAWQRRLREYFGFITEVWVF 300
V++ I + +WRIF++ + H ++ + Y+ F+ VW+F
Sbjct: 216 VIIGTIFLAVALWRIFAYHLTDNHHVGFEGGIL-YWHFVDVVWLF 259
>sp|Q95840|COX3_MAGGR CYTOCHROME C OXIDASE POLYPEPTIDE III
dbj|BAA13605.1| (D88389) cytochrome oxidase subunit III [Magnaporthe grisea]
Length = 269
Score = 29.6 bits (65), Expect = 4.6
Identities = 12/45 (26%), Positives = 25/45 (54%)
Frame = +1
Query: 166 VVLNCIIKTLTVWRIFSFWASHRSHQAWQRRLREYFGFITEVWVF 300
V++ I + +WRIF++ + H ++ + Y+ F+ VW+F
Sbjct: 216 VIIGTIFLLVALWRIFAYHLTDNHHLGFEAGIL-YWHFVDVVWLF 259
>gb|AAD37940.1| (AF143303) pre-C/C protein [Hepatitis B virus]
Length = 184
Score = 29.6 bits (65), Expect = 4.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS P TT+ R R P+R+ P R+R
Sbjct: 124 WIRTP--PAYRPPNAPILSTPPG----TTVVRRRDRGRSPRRRTPSPRRR 167
>gb|AAK57198.1| (AF350081) precore/core protein [Hepatitis B virus]
Length = 214
Score = 29.6 bits (65), Expect = 4.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W T P ++ P P LS PETT+ R R P+R+ P R+R
Sbjct: 154 WIRT--LPAYRPPNAPILST----LPETTVVRRRDRGRSPRRRTPSPRRR 197
>pir||H82175 multidrug resistance protein VC1634 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF94785.1| (AE004241) multidrug resistance protein [Vibrio cholerae]
Length = 401
Score = 29.3 bits (64), Expect = 6.1
Identities = 9/17 (52%), Positives = 14/17 (81%)
Frame = +1
Query: 307 LVDWSLWGLIPFVDVFL 357
++DW LWG +PFV +F+
Sbjct: 308 VLDWGLWGTVPFVVLFV 324
>pir||S53288 core antigen - hepatitis B virus (isolate patient Pische'90)
emb|CAA59535.1| (X85262) core [Hepatitis B virus]
Length = 185
Score = 29.3 bits (64), Expect = 6.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P P LS PETT+ R R +R+ P R+R
Sbjct: 125 WIRTP--PPYRPPNAPILST----LPETTVVRYRDRGRSTRRRTPSPRRR 168
>gb|AAK59390.1| (AY034878) core protein [Hepatitis B virus]
Length = 185
Score = 29.3 bits (64), Expect = 6.1
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1
Query: 339 WYETP*TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRKR 190
W TP P ++ P LS PE T+ R R P+R+ P R+R
Sbjct: 125 WIRTP--PAYRTTNAPILST----LPEATVVRQRDRRRSPRRRTPSPRRR 168
>emb|CAC10630.1| (AJ389684) gamma-gliadin [Aegilops tauschii]
Length = 203
Score = 29.3 bits (64), Expect = 6.1
Identities = 20/78 (25%), Positives = 36/78 (45%), Gaps = 1/78 (1%)
Frame = -1
Query: 327 P*TPVHQCPKNPYLSNEPKIFPETTLP-RLMRAMRGPKRKDPPHRKRLDDTV*HHYFFCP 151
P P Q P+ PY + FP+T P +L + P+++ P +++ F
Sbjct: 43 PQQPFPQQPQQPYPQEPQQPFPQTQQPQQLFPQSQQPQQQFPQPQQQ----------FPQ 92
Query: 150 PELSRQLVENQQPKCLEPA 94
P+ +Q QQP ++P+
Sbjct: 93 PQQPQQSFPQQQPPFIQPS 111
>gb|AAD22170.1|AF061282_24 (AF061282) patatin-like protein [Sorghum bicolor]
Length = 410
Score = 29.3 bits (64), Expect = 6.1
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 6/25 (24%)
Frame = -1
Query: 291 YLSNEPKIFPE------TTLPRLMRAMRGPK 217
YL N PKIFP+ T + L+ MRGPK
Sbjct: 101 YLENGPKIFPQRKAGWLTPVANLIGTMRGPK 131
>dbj|BAB27164.1| (AK010759) putative [Mus musculus]
Length = 147
Score = 29.3 bits (64), Expect = 6.1
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 98 RLTPYWPAFEHVCSSXSLAVMNCLAATCGR 9
RL PYWP+ VC++ S TCGR
Sbjct: 7 RLAPYWPSCPRVCATAS-------TETCGR 29
>emb|CAC10628.1| (AJ389682) gamma-gliadin [Aegilops tauschii]
Length = 204
Score = 29.3 bits (64), Expect = 6.1
Identities = 20/78 (25%), Positives = 36/78 (45%), Gaps = 1/78 (1%)
Frame = -1
Query: 327 P*TPVHQCPKNPYLSNEPKIFPETTLP-RLMRAMRGPKRKDPPHRKRLDDTV*HHYFFCP 151
P P Q P+ PY + FP+T P +L + P+++ P +++ F
Sbjct: 43 PQQPFPQQPQQPYPQEPQQPFPQTQQPQQLFPQSQQPQQQFPQPQQQ----------FPQ 92
Query: 150 PELSRQLVENQQPKCLEPA 94
P+ +Q QQP ++P+
Sbjct: 93 PQQPQQSFPQQQPPFIQPS 111
>sp|P20799|N12A_PEA EARLY NODULIN 12A PRECURSOR (N-12A)
pir||A32695 ENOD12 protein - garden pea
pir||S59557 early nodulin 12A precursor - garden pea
gb|AAA33664.1| (M60585) early nodulin protein 12 [Pisum sativum]
emb|CAA57131.1| (X81366) Early nodulin 12A [Pisum sativum]
Length = 110
Score = 29.3 bits (64), Expect = 6.1
Identities = 15/43 (34%), Positives = 22/43 (50%)
Frame = -1
Query: 321 TPVHQCPKNPYLSNEPKIFPETTLPRLMRAMRGPKRKDPPHRK 193
TPVH+ P+ ++P P+ PR + P R PPH+K
Sbjct: 49 TPVHKPPQKETPVHKP---PQKEPPRHKPPQKEPPRHKPPHKK 88
>gb|AAD37957.1| (AF143307) pre-C/C protein [Hepatitis B virus]
Length = 135
Score = 28.9 bits (63), Expect = 7.9
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 321 TPVHQCPKNPYLSNEPKI--FPETTLPRLMRAMRGPKRKDPPHRKR 190
+P H P + L + P + PETT+ R R P+R+ P R+R
Sbjct: 73 SPEHCSPHHTALRDAPILSRLPETTVVRRRDRGRSPRRRTPSPRRR 118
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,714,170
Number of Sequences: 705144
Number of extensions: 3108374
Number of successful extensions: 8354
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 8039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8342
length of database: 222,175,239
effective HSP length: 108
effective length of database: 146,019,687
effective search space used: 3504472488
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)