The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.1 [Apr-13-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1605_H06_O11ZS5.seq 1605_H06_O11ZS5 0 0 0 1 558
(558 letters)
Database: nr
705,144 sequences; 222,175,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
pir||B75429 hypothetical protein - Deinococcus radiodurans ... 32 2.2
ref|NP_040046.1| HCMVUL109 [human herpesvirus 5] >gi|137002... 31 4.8
gb|AAF48151.2| (AE003488) Ten-a gene product [Drosophila me... 31 4.8
emb|CAA48691.1| (X68794) tenascin-like protein precursor [D... 31 4.8
gb|AAF23018.1|AF218806_1 (AF218806) putative ABA-induced gu... 31 4.8
pir||A61625 tenascin-like protein precursor - fruit fly (Dr... 31 4.8
dbj|BAB43448.1| (AP003137) TcaA protein [Staphylococcus aur... 31 6.3
>pir||B75429 hypothetical protein - Deinococcus radiodurans (strain R1)
gb|AAF10747.1|AE001966_9 (AE001966) hypothetical protein [Deinococcus radiodurans]
Length = 298
Score = 32.3 bits (72), Expect = 2.2
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 11/49 (22%)
Frame = +3
Query: 156 DAVKDTAQKVDRVVS-------DKIVD---GIEAG-QEAAATVTKKTQELKGDASAKAQE 302
D KD AQ V VS DK D ++AG Q+AAA V K Q++K DAS A +
Sbjct: 128 DQAKDKAQDVKADVSKAADQAKDKAQDVAQNVQAGAQQAAANVKDKVQDVKADASKAADQ 187
>ref|NP_040046.1| HCMVUL109 [human herpesvirus 5]
sp|P16738|ULA9_HCMVA HYPOTHETICAL PROTEIN UL109
pir||S09876 hypothetical protein UL109 - human cytomegalovirus (strain AD169)
emb|CAA35347.1| (X17403) HCMVUL109 [human herpesvirus 5]
Length = 98
Score = 31.2 bits (69), Expect = 4.8
Identities = 18/53 (33%), Positives = 30/53 (55%), Gaps = 2/53 (3%)
Frame = +2
Query: 38 HHVFPHQERHPPCGS-RSSRHCFPSSPNIHH*IRPAANCYRC-CQGHCSKGRSCC 196
H ++ Q+ H + RS++HC ++ H RPAA+C+RC +G + R C
Sbjct: 34 HDIYREQQNHHDDETKRSTKHCVTAT---HPWPRPAASCFRCPLRGGHHRRRPAC 85
>gb|AAF48151.2| (AE003488) Ten-a gene product [Drosophila melanogaster]
Length = 777
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/44 (45%), Positives = 23/44 (51%), Gaps = 10/44 (22%)
Frame = +2
Query: 158 CCQGHCSK--GRS-CCER*DCRWH*GWTGGCCHRYQKDPRA-------QGRCFC 289
C Q CS GR+ CE CR + GWTG C + D R G C C
Sbjct: 594 CSQAVCSLDCGRNGVCESGKCRCNSGWTGNLCDQLPCDSRCSEHGQCKNGTCVC 647
>emb|CAA48691.1| (X68794) tenascin-like protein precursor [Drosophila melanogaster]
Length = 777
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/44 (45%), Positives = 23/44 (51%), Gaps = 10/44 (22%)
Frame = +2
Query: 158 CCQGHCSK--GRS-CCER*DCRWH*GWTGGCCHRYQKDPRA-------QGRCFC 289
C Q CS GR+ CE CR + GWTG C + D R G C C
Sbjct: 594 CSQAVCSLDCGRNGVCESGKCRCNSGWTGNLCDQLPCDSRCSEHGQCKNGTCVC 647
>gb|AAF23018.1|AF218806_1 (AF218806) putative ABA-induced guard cell protein [Vicia faba]
Length = 170
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +3
Query: 150 ATDAVKDTAQKVDRVVSDKIVDGIEAGQEAAATVTKKTQELKGDASAKAQE 302
A+DA TA+ + V SDKI +GIE + AA TK ++ +G+ + KA +
Sbjct: 115 ASDAQDKTAEALGSV-SDKINEGIETASDKAAEATKALKK-EGEKAEKAAD 163
>pir||A61625 tenascin-like protein precursor - fruit fly (Drosophila
melanogaster)
Length = 782
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/44 (45%), Positives = 23/44 (51%), Gaps = 10/44 (22%)
Frame = +2
Query: 158 CCQGHCSK--GRS-CCER*DCRWH*GWTGGCCHRYQKDPRA-------QGRCFC 289
C Q CS GR+ CE CR + GWTG C + D R G C C
Sbjct: 594 CSQAVCSLDCGRNGVCESGKCRCNSGWTGNLCDQLPCDSRCSEHGQCKNGTCVC 647
>dbj|BAB43448.1| (AP003137) TcaA protein [Staphylococcus aureus subsp. aureus N315]
dbj|BAB58518.1| (AP003365) TcaA protein [Staphylococcus aureus subsp. aureus Mu50]
Length = 460
Score = 30.8 bits (68), Expect = 6.3
Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Frame = +3
Query: 12 SAPTKQPITTMSFLTKNVIRRAALAPRVIAFQAPRTFTTRFALQRTATDAVKDTAQ---- 179
+APTKQPI TK + VIA T F L A+K T
Sbjct: 176 TAPTKQPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFILGTYRIPAMKSTENGDFA 235
Query: 180 ---KVD-RVVSDKIVDGIEAGQEAAATVTKKTQELKGDASAK 293
K D R + + VD E +EA TVT K D+S K
Sbjct: 236 GYLKFDFRQSNSETVDVTEDFEEANITVTLKGDTKLNDSSKK 277
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,266,867
Number of Sequences: 705144
Number of extensions: 2789014
Number of successful extensions: 10310
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10062
length of database: 222,175,239
effective HSP length: 111
effective length of database: 143,904,255
effective search space used: 10648914870
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)