The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.1 [Apr-13-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1605_H11_O21ZS5.seq 1605_H11_O21ZS5 0 0 0 1 577
(565 letters)
Database: nr
705,144 sequences; 222,175,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
pir||T50315 hypothetical protein SPBC1703.02 with ARID DNA-... 33 1.3
gb|AAH05300.1|AAH05300 (BC005300) dystrobrevin alpha [Homo ... 33 1.7
gb|AAD33913.1|AF143542_1 (AF143542) alpha-dystrobrevin 3 [M... 33 1.7
gb|AAC50429.1| (U46744) dystrobrevin-alpha [Homo sapiens] >... 33 1.7
pir||S22126 finger protein unkempt - fruit fly (Drosophila ... 33 1.7
sp|Q9D2N4|DTNA_MOUSE DYSTROBREVIN ALPHA (ALPHA-DYSTROBREVIN... 33 1.7
ref|NP_001382.1| dystrobrevin, alpha; Dystobrevin, alpha (d... 33 1.7
gb|AAD33915.1|AF143544_1 (AF143544) alpha-dystrobrevin 2b [... 33 1.7
ref|NP_001383.1| dystrobrevin, alpha; Dystobrevin, alpha (d... 33 1.7
ref|XP_012736.2| dystrobrevin, alpha [Homo sapiens] 33 1.7
emb|CAA08769.1| (AJ009668) alpha-dystrobrevin-3 [Homo sapiens] 33 1.7
ref|NP_034217.1| dystrobrevin; 87K protein; alpha-dystrobre... 33 1.7
gb|AAC50424.1| (U26742) similar to the 87 kDA Torpedo acety... 33 1.7
ref|XP_012737.2| dystrobrevin, alpha [Homo sapiens] >gi|136... 33 1.7
gb|AAC50426.1| (U26744) similar to the 87 kDa Torpedo acety... 33 1.7
emb|CAA64519.1| (X95227) dystrobrevin [Mus musculus] >gi|15... 33 1.7
ref|NP_001381.1| dystrobrevin, alpha; Dystobrevin, alpha (d... 33 1.7
gb|AAC50430.1| (U46745) dystrobrevin-beta [Homo sapiens] >g... 33 1.7
gb|AAD33914.1|AF143543_1 (AF143543) alpha-dystrobrevin 2a [... 33 1.7
emb|CAA64518.1| (X95226) dystrobrevin [Mus musculus] >gi|15... 33 1.7
emb|CAA75752.1| (Y15742) dystrobrevin B (mDTN-B) [Mus muscu... 32 2.9
sp|O70585|DTNB_MOUSE DYSTROBREVIN BETA (BETA-DYSTROBREVIN) ... 32 2.9
ref|NP_031912.1| dystrobrevin, beta [Mus musculus] >gi|2980... 32 2.9
dbj|BAA78613.1| (AB028177) cell-adhesion protein [Lentinula... 32 3.7
dbj|BAA78615.1| (AB028179) cell-adhesion protein [Lentinula... 31 6.4
gb|AAH08882.1|AAH08882 (BC008882) Similar to hypothetical p... 31 6.4
sp|Q95267|GCR_TUPGB GLUCOCORTICOID RECEPTOR (GR) >gi|164438... 31 6.4
dbj|BAA78611.1| (AB028175) cell-adhesion protein [Lentinula... 31 6.4
gb|AAD26868.1|AC007230_2 (AC007230) Contains similarity to ... 30 8.3
>pir||T50315 hypothetical protein SPBC1703.02 with ARID DNA-binding domain
[imported] - fission yeast (Schizosaccharomyces pombe)
emb|CAB66446.1| (AL136536) hypothetical protein with ARID DNA-binding domain
[Schizosaccharomyces pombe]
Length = 780
Score = 33.1 bits (74), Expect = 1.3
Identities = 24/85 (28%), Positives = 40/85 (46%)
Frame = +2
Query: 98 MTARDERNPNLPPQAAGIPLSAALVLRNIARNVGKTEAEEEMLKGQAETGESGGWNEILF 277
+TA D++ A GI L+A LVLRN+ R+ ++LF
Sbjct: 718 LTAVDDQG-----DATGIALTATLVLRNLVRS---------------------KQGKMLF 751
Query: 278 RPLMPRLFEILTENRAMSPYISSLL 352
+ R+ E+ + N A++PY+S +L
Sbjct: 752 SAIESRVLEVSSLNPAVAPYVSEML 776
>gb|AAH05300.1|AAH05300 (BC005300) dystrobrevin alpha [Homo sapiens]
Length = 371
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>gb|AAD33913.1|AF143542_1 (AF143542) alpha-dystrobrevin 3 [Mus musculus]
Length = 371
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>gb|AAC50429.1| (U46744) dystrobrevin-alpha [Homo sapiens]
prf||2209320D dystrobrevin:ISOTYPE=alpha [Homo sapiens]
Length = 686
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>pir||S22126 finger protein unkempt - fruit fly (Drosophila melanogaster)
pir||S42526 finger protein unkempt - fruit fly (Drosophila melanogaster)
emb|CAA77616.1| (Z11527) CYS3HIS finger protein [Drosophila melanogaster]
gb|AAF56103.1| (AE003742) unk gene product [Drosophila melanogaster]
Length = 614
Score = 32.7 bits (73), Expect = 1.7
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = -1
Query: 562 IPRKHLQSPPVQGSHHVKMRTVPLFN----TTLAQELLR*TPRPALFTPTRLLSH*FGEN 395
IP L P ++H + V FN L+ L +LF P+R++S FG+
Sbjct: 366 IPSSSLTYSP---TNHANLFNVDAFNYGGSNKLSNSLSATQNDSSLFFPSRIISPGFGDG 422
Query: 394 ISLSP-ILVMNANQIKQ**NVRTHG-SVFRKNLKQARHKWPEKNL 266
+S+SP + + N I+ N + G S+F L A++ + ++L
Sbjct: 423 LSISPSVRISELNTIRDDINSSSVGNSLFENTLNTAKNAFSLQSL 467
>sp|Q9D2N4|DTNA_MOUSE DYSTROBREVIN ALPHA (ALPHA-DYSTROBREVIN)
dbj|BAB31746.1| (AK019477) putative [Mus musculus]
Length = 746
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>ref|NP_001382.1| dystrobrevin, alpha; Dystobrevin, alpha (dystrophin-related protein
3) [Homo sapiens]
gb|AAB58542.1| (U84551) dystrobrevin isoform DTN-2 [Homo sapiens]
Length = 570
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>gb|AAD33915.1|AF143544_1 (AF143544) alpha-dystrobrevin 2b [Mus musculus]
Length = 570
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>ref|NP_001383.1| dystrobrevin, alpha; Dystobrevin, alpha (dystrophin-related protein
3) [Homo sapiens]
gb|AAB58541.1| (U84551) dystrobrevin isoform DTN-3 [Homo sapiens]
Length = 374
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>ref|XP_012736.2| dystrobrevin, alpha [Homo sapiens]
Length = 374
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>emb|CAA08769.1| (AJ009668) alpha-dystrobrevin-3 [Homo sapiens]
Length = 374
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>ref|NP_034217.1| dystrobrevin; 87K protein; alpha-dystrobrevin [Mus musculus]
emb|CAB02145.1| (Z79787) dystrobrevin [Mus musculus]
Length = 374
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>gb|AAC50424.1| (U26742) similar to the 87 kDA Torpedo acetylcholine
receptor-associated protein; similar to rat
apodystrophin-3, PIR Accession Number S32011 [Homo
sapiens]
prf||2209320A dystrobrevin:ISOTYPE=delta [Homo sapiens]
Length = 374
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>ref|XP_012737.2| dystrobrevin, alpha [Homo sapiens]
ref|XP_018396.1| dystrobrevin, alpha [Homo sapiens]
Length = 395
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>gb|AAC50426.1| (U26744) similar to the 87 kDa Torpedo acetylcholine
receptor-associated protein; similar to human dystrophin
encoded by GenBank Accession Number M86903 [Homo
sapiens]
prf||2209320C dystrobrevin:ISOTYPE=gamma [Homo sapiens]
Length = 513
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>emb|CAA64519.1| (X95227) dystrobrevin [Mus musculus]
prf||2211323B dystrobrevin 2 [Mus musculus]
Length = 513
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>ref|NP_001381.1| dystrobrevin, alpha; Dystobrevin, alpha (dystrophin-related protein
3) [Homo sapiens]
sp|Q9Y4J8|DTNA_HUMAN DYSTROBREVIN ALPHA (DYSTROBREVIN-ALPHA)
gb|AAB58543.1| (U84551) dystrobrevin isoform DTN-1 [Homo sapiens]
Length = 743
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>gb|AAC50430.1| (U46745) dystrobrevin-beta [Homo sapiens]
prf||2209320E dystrobrevin:ISOTYPE=beta [Homo sapiens]
Length = 567
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSRKPLHPMFPDQPEKPLNLAHIV 334
>gb|AAD33914.1|AF143543_1 (AF143543) alpha-dystrobrevin 2a [Mus musculus]
Length = 567
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>emb|CAA64518.1| (X95226) dystrobrevin [Mus musculus]
prf||2211323A dystrobrevin 1 [Mus musculus]
Length = 688
Score = 32.7 bits (73), Expect = 1.7
Identities = 19/58 (32%), Positives = 27/58 (45%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAALVL 175
HA S H K SW PAK +T A ++++ R P P P PL+ A ++
Sbjct: 275 HAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIV 334
>emb|CAA75752.1| (Y15742) dystrobrevin B (mDTN-B) [Mus musculus]
Length = 730
Score = 32.0 bits (71), Expect = 2.9
Identities = 19/55 (34%), Positives = 25/55 (44%), Gaps = 2/55 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAA 166
HAS S H K SW PAK ++ A +++ R P P P+ PL A
Sbjct: 305 HASGAHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPSREPPHPVFPEQPEKPLDLA 361
>sp|O70585|DTNB_MOUSE DYSTROBREVIN BETA (BETA-DYSTROBREVIN) (DTN-B) (MDTN-B)
Length = 700
Score = 32.0 bits (71), Expect = 2.9
Identities = 19/55 (34%), Positives = 25/55 (44%), Gaps = 2/55 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAA 166
HAS S H K SW PAK ++ A +++ R P P P+ PL A
Sbjct: 275 HASGAHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPSREPPHPVFPEQPEKPLDLA 331
>ref|NP_031912.1| dystrobrevin, beta [Mus musculus]
emb|CAA05796.1| (AJ003007) beta-dystrobrevin [Mus musculus]
emb|CAA09038.1| (AJ010204) beta-dystrobrevin [Mus musculus]
Length = 615
Score = 32.0 bits (71), Expect = 2.9
Identities = 19/55 (34%), Positives = 25/55 (44%), Gaps = 2/55 (3%)
Frame = +2
Query: 2 HASALPSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLP--PQAAGIPLSAA 166
HAS S H K SW PAK ++ A +++ R P P P+ PL A
Sbjct: 275 HASGAHSNQHQMKEHSSWKSPAKKLSHAISKSLGCVPSREPPHPVFPEQPEKPLDLA 331
>dbj|BAA78613.1| (AB028177) cell-adhesion protein [Lentinula edodes]
Length = 352
Score = 31.6 bits (70), Expect = 3.7
Identities = 24/114 (21%), Positives = 54/114 (47%)
Frame = +2
Query: 17 PSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLPPQAAGIPLSAALVLRNIARNV 196
P+++H + + A +MTV F+ ++++ N + PQ + S+++ R ++ ++
Sbjct: 78 PTKSHHQPPSTTGSTAAPSMTVPFDSSLSSTIPGNLQIRPQTSDFFNSSSMYARPLSPSL 137
Query: 197 GKTEAEEEMLKGQAETGESGGWNEILFRPLMPRLFEILTENRAMSPYISSLLDL 358
+ E E+ ++ Q ++ P RL + T + + P SS +DL
Sbjct: 138 IQKEQLEQEVELQTQS---------FAHPTFRRLNKHSTASSSQIPSTSSTVDL 182
>dbj|BAA78615.1| (AB028179) cell-adhesion protein [Lentinula edodes]
Length = 350
Score = 30.8 bits (68), Expect = 6.4
Identities = 24/114 (21%), Positives = 53/114 (46%)
Frame = +2
Query: 17 PSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLPPQAAGIPLSAALVLRNIARNV 196
P+++H + + A +MTV F+ ++++ N + PQ + S+ + R ++ ++
Sbjct: 78 PTKSHHQPPSTTGSTAAPSMTVPFDSSLSSTIPGNLQIRPQTSDFFNSSPMYARPLSPSL 137
Query: 197 GKTEAEEEMLKGQAETGESGGWNEILFRPLMPRLFEILTENRAMSPYISSLLDL 358
+ E E+ ++ Q ++ P RL + T + + P SS +DL
Sbjct: 138 IQKEQLEQEVELQTQS---------FAHPTFRRLNKHSTASSSQIPSTSSTVDL 182
>gb|AAH08882.1|AAH08882 (BC008882) Similar to hypothetical protein FLJ13909 [Homo sapiens]
Length = 195
Score = 30.8 bits (68), Expect = 6.4
Identities = 14/30 (46%), Positives = 18/30 (59%), Gaps = 2/30 (6%)
Frame = +3
Query: 144 PVSPSALRWSCGTLRGTWGRLRQKKR--CSKG 233
P PS+ W C T R TW R K+R C++G
Sbjct: 161 PWRPSSCEWLCWTSRSTWKRCFWKRRWGCNRG 192
>sp|Q95267|GCR_TUPGB GLUCOCORTICOID RECEPTOR (GR)
emb|CAA99379.1| (Z75079) glucocorticoid receptor [Tupaia belangeri]
Length = 776
Score = 30.8 bits (68), Expect = 6.4
Identities = 16/46 (34%), Positives = 26/46 (55%)
Frame = +2
Query: 122 PNLPPQAAGIPLSAALVLRNIARNVGKTEAEEEMLKGQAETGESGG 259
P P +A + +SAAL+ + + +E++ LKGQ TG +GG
Sbjct: 136 PEHPKISASVAVSAALLKKELPETPSDVSSEQQNLKGQ--TGTNGG 179
>dbj|BAA78611.1| (AB028175) cell-adhesion protein [Lentinula edodes]
dbj|BAA78612.1| (AB028176) cell-adhesion protein [Lentinula edodes]
Length = 352
Score = 30.8 bits (68), Expect = 6.4
Identities = 24/114 (21%), Positives = 53/114 (46%)
Frame = +2
Query: 17 PSEAHSRKSERSWIIPAKTMTVAFEETMTARDERNPNLPPQAAGIPLSAALVLRNIARNV 196
P+++H + + A +MTV F+ ++++ N + PQ + S+ + R ++ ++
Sbjct: 78 PTKSHHQPPSTTGSTAAPSMTVPFDSSLSSTIPGNLQIRPQTSDFFNSSPMYARPLSPSL 137
Query: 197 GKTEAEEEMLKGQAETGESGGWNEILFRPLMPRLFEILTENRAMSPYISSLLDL 358
+ E E+ ++ Q ++ P RL + T + + P SS +DL
Sbjct: 138 IQKEQLEQEVELQTQS---------FAHPTFRRLNKHSTASSSQIPSTSSTVDL 182
>gb|AAD26868.1|AC007230_2 (AC007230) Contains similarity to F13P17.8 gi|3337355 hypothetical
protein from Arabidopsis thaliana BAC gb|AC004481. EST
gb|AA394560 comes from this gene.
Length = 1159
Score = 30.4 bits (67), Expect = 8.3
Identities = 24/83 (28%), Positives = 43/83 (50%), Gaps = 6/83 (7%)
Frame = +2
Query: 29 HSRKSERSWIIPAKTMTVAFEETMTARD-ERNPNLPPQAAGIPLSAALVLRNIARNVGKT 205
H KS + + T+A E M+ + +R PN P Q++ + AA +RN+ G
Sbjct: 933 HCWKSPERESLVTRLFTLAEYERMSCKKCKRKPNYPEQSSYGIVMAANSIRNLKCAFGNI 992
Query: 206 EAEEEMLKGQAETG-----ESGGWNEILF 277
+ E+ + G+ + G ++GG +I F
Sbjct: 993 KFEDILKMGRMKDGMICDVKTGGCGDINF 1021
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 246,995,332
Number of Sequences: 705144
Number of extensions: 5289957
Number of successful extensions: 18842
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 18331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18814
length of database: 222,175,239
effective HSP length: 112
effective length of database: 143,199,111
effective search space used: 10739933325
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)