The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.1 [Apr-13-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1606_B03_C06ZS5.seq 1606_B03_C06ZS5 0 0 0 1 607
(596 letters)
Database: nr
705,144 sequences; 222,175,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
pir||T31095 vitellogenin precursor - Oreochromis aureus >gi... 33 1.5
prf||1615125A vitellogenin [Oreochromis mossambicus] 32 3.3
gb|AAA99358.1| (L40707) immunoglobulin kappa chain [Homo sa... 31 7.3
gb|AAF05521.1| (AF185627) immunoglobulin kappa light chain ... 30 9.5
>pir||T31095 vitellogenin precursor - Oreochromis aureus
gb|AAD01615.1| (AF017250) vitellogenin precursor [Oreochromis aureus]
gb|AAD48085.1|AF072686_1 (AF072686) vitellogenin; phospholipoglycoprotein; yolk protein
precursor [Oreochromis aureus]
Length = 1788
Score = 33.1 bits (74), Expect = 1.5
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = -3
Query: 582 SLQAALHALP---PVKSSGVQSESGVSYAATQVDGNDLSPMDSKSVNLRDPAEAVLAIR 415
S++ L LP PV+++ V + T VD + LS KS++LRD AEA LA R
Sbjct: 1724 SVEPVLQCLPGCIPVRTTTVNVGFHCLPSDTTVDRSGLSSFFEKSIDLRDTAEAHLACR 1782
>prf||1615125A vitellogenin [Oreochromis mossambicus]
Length = 109
Score = 32.0 bits (71), Expect = 3.3
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = -3
Query: 594 CCTESLQAALHALPPVKSSGVQSESGVSYAATQVDGNDLSPMDSKSVNLRDPAEAVLAIR 415
CC+ A A PV+++ V + T VD + LS KS++LRD AEA LA R
Sbjct: 49 CCS-----ACPACIPVRTTTVNVGFHCLPSDTTVDRSGLSSFFEKSIDLRDTAEAHLACR 103
>gb|AAA99358.1| (L40707) immunoglobulin kappa chain [Homo sapiens]
Length = 99
Score = 30.8 bits (68), Expect = 7.3
Identities = 13/31 (41%), Positives = 19/31 (60%)
Frame = +1
Query: 115 LTLTSQDPNPSACWFCQFGCQHPSVFQPGSR 207
LT++S +P A +FCQ G P +F G+R
Sbjct: 65 LTISSLEPEDFALYFCQQGDNRPLIFGQGTR 95
>gb|AAF05521.1| (AF185627) immunoglobulin kappa light chain variable region [Aotus
nancymaae]
Length = 99
Score = 30.4 bits (67), Expect = 9.5
Identities = 12/31 (38%), Positives = 19/31 (60%)
Frame = +1
Query: 115 LTLTSQDPNPSACWFCQFGCQHPSVFQPGSR 207
LT++S P+ A ++CQ G P F PG++
Sbjct: 65 LTISSLQPDDFATYYCQHGYNTPFTFGPGTK 95
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,635,270
Number of Sequences: 705144
Number of extensions: 4055076
Number of successful extensions: 10270
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10269
length of database: 222,175,239
effective HSP length: 112
effective length of database: 143,199,111
effective search space used: 12315123546
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)