Score E
Sequences producing significant alignments: (bits) Value
gb|AAK17096.1| (AF277381) ribosomal protein L37 [Aspergillu... 144 4e-34
sp|O44125|RL37_SCHMA 60S RIBOSOMAL PROTEIN L37 >gi|2665824|... 125 2e-28
ref|NP_010788.1| 60S ribosomal protein L37B (L43) (YL35); R... 123 9e-28
ref|NP_013286.1| 60S ribosomal protein L37A (L43) (YL35); R... 122 2e-27
gb|AAF48428.1| (AE003498) CG9091 gene product [Drosophila m... 120 6e-27
sp|P05733|R37B_SCHPO 60S RIBOSOMAL PROTEIN L37-B (L37-2) (Y... 116 9e-26
pir||T43306 ribosomal protein L37 - fission yeast (Schizosa... 115 1e-25
emb|CAB77643.1| (AJ390504) ribosomal protein L37 [Candida a... 115 1e-25
gb|AAF46957.1| (AE003459) CG9873 gene product [Drosophila m... 112 2e-24
gb|AAG51542.1|AC037424_7 (AC037424) 60S ribosomal protein L... 110 8e-24
ref|NP_000988.1| ribosomal protein L37 [Homo sapiens] >gi|1... 109 1e-23
dbj|BAB25746.1| (AK008563) putative [Mus musculus] 107 5e-23
pir||T26055 hypothetical protein W01D2.1 - Caenorhabditis e... 106 9e-23
sp|P79244|RL37_BOVIN 60S RIBOSOMAL PROTEIN L37 >gi|4262019|... 106 1e-22
sp|Q43292|RL37_ARATH 60S RIBOSOMAL PROTEIN L37 105 3e-22
sp|P49622|RL37_CAEEL PROBABLE 60S RIBOSOMAL PROTEIN L37 >gi... 104 3e-22
sp|P39094|RL37_LEIIN 60S RIBOSOMAL PROTEIN L37 >gi|416373|g... 94 6e-19
ref|XP_003722.3| similar to ribosomal protein L37 (H. sapie... 92 2e-18
gb|AAB63862.1| (U97370) 60S ribosomal protein homolog [Schi... 89 1e-17
ref|XP_016266.1| similar to ribosomal protein L37 (H. sapie... 82 3e-15
sp|P54011|RL37_METJA 50S RIBOSOMAL PROTEIN L37E >gi|2119125... 69 2e-11
sp|O26744|RL37_METTH 50S RIBOSOMAL PROTEIN L37E >gi|7440762... 64 7e-10
sp|P32410|RL37_HALMA 50S RIBOSOMAL PROTEIN L37E (L35E) >gi|... 63 1e-09
gb|AAG19794.1| (AE005064) 50S ribosomal protein L37E; Rpl37... 61 6e-09
gb|AAK41052.1| (AE006699) LSU ribosomal protein L37E (rpl37... 60 1e-08
sp|Q9YEQ4|RL37_AERPE 50S RIBOSOMAL PROTEIN L37E >gi|7521372... 60 1e-08
ref|NP_126333.1| LSU ribosomal protein L37E [Pyrococcus aby... 59 2e-08
ref|NP_110874.1| 50S ribosomal protein L37E [Thermoplasma v... 59 3e-08
sp|P49212|RL37_LYCES 60S RIBOSOMAL PROTEIN L37 >gi|629673|p... 58 4e-08
emb|CAC12365.1| (AL445067) probable ribosomal protein L37 [... 58 4e-08
ref|NP_069708.1| LSU ribosomal protein L37E (rpl37E) [Archa... 55 3e-07
sp|P22667|R37A_SCHPO 60S RIBOSOMAL PROTEIN L37-A (YL35) 54 9e-07
pir||S10052 ribosomal protein L37.e - fission yeast (Schizo... 40 0.008
pir||T42731 atrophin-1 related protein - rat >gi|1209103|gb... 35 0.43
dbj|BAA32303.1| (AB007927) KIAA0458 protein [Homo sapiens] 35 0.43
dbj|BAA95898.1| (AB036737) RERE [Homo sapiens] 34 0.73
ref|NP_036234.1| arginine-glutamic acid dipeptide (RE) repe... 34 0.73
gb|AAC31120.1| (AF016005) atrophin-1 related protein [Homo ... 33 0.95
gb|AAC28264.1| (AF041104) atrophin-1 like protein [Homo sap... 33 0.95
ref|XP_003403.3| SH3-domain binding protein 2 [Homo sapiens] 33 0.95
sp|Q9X4E5|TRPB_RHOSH TRYPTOPHAN SYNTHASE BETA CHAIN >gi|476... 33 1.2
ref|NP_014805.1| Yrr1p [Saccharomyces cerevisiae] >gi|21329... 33 1.6
gb|AAF55152.1| (AE003708) CG4285 gene product [Drosophila m... 32 2.8
pir||A70894 hypothetical protein Rv1075c - Mycobacterium tu... 32 3.6
gb|AAK45361.1| (AE006991) hypothetical protein [Mycobacteri... 32 3.6
ref|NP_038636.1| nascent polypeptide-associated complex alp... 32 3.6
pir||F70947 hypothetical protein Rv3168 - Mycobacterium tub... 32 3.6
ref|NP_033495.1| Unc-51 like kinase 1 (C. elegans); Unc-51 ... 31 4.7
gb|AAF73150.1|AF149092_1 (AF149092) SH3 domain-containing a... 31 4.7
gb|AAB26348.1| (S61526) putative helicase [Plantago asiatic... 31 4.7
pir||T39233 probable Inositol polyphosphate phosphatase - f... 31 4.7
gb|AAK28280.1| (AF339907) unknown [Leishmania major] 31 4.7
emb|CAB11494.2| (Z98763) putative Inositol polyphosphate ph... 31 4.7
gb|AAF35992.1|AC005836_4 (AC005836) L509.4 [Leishmania major] 31 4.7
dbj|BAA36937.1| (AB019241) c-myc [Oryctolagus cuniculus] 31 4.7
gb|AAF47121.1| (AE003462) CG10904 gene product [Drosophila ... 31 6.2
gb|AAC69930.1| (AC005819) putative extensin [Arabidopsis th... 31 6.2
gb|AAD54006.1|AF088856_5 (AF088856) IgiC [Vogesella indigof... 31 6.2
gb|AAK61254.1|AE006464_22 (AE006464) Similar to pre-pro-meg... 31 6.2
ref|NP_034699.1| inversin [Mus musculus] >gi|7513701|pir||T... 31 6.2
pir||T14151 Inv protein - mouse >gi|14349347|gb|AAC34976.3|... 31 6.2
sp|Q07517|VHEL_P1AMV PUTATIVE HELICASE (ORF 2) >gi|479507|p... 31 6.2
gb|AAF58248.1| (AE003814) CG17385 gene product [Drosophila ... 31 6.2
dbj|BAB02674.1| (AB012247) gene_id:MSL1.12~unknown protein ... 31 6.2
emb|CAA08915.1| (AJ009956) alpha-galactosidase 1 [Penicilli... 31 6.2
ref|NP_008889.1| zinc finger protein 16 (KOX 9) [Homo sapie... 31 6.2
pir||T01547 probable phospholipase D (EC 3.1.4.4) A_IG005I1... 31 6.2
ref|XP_011670.1| zinc finger protein 16 (KOX 9) [Homo sapiens] 31 6.2
gb|AAG20155.1| (AE005093) Vng1983h [Halobacterium sp. NRC-1] 30 8.0
gb|AAC23679.1| (AF068751) serine/threonine protein phosphat... 30 8.0
ref|NP_036252.1| CD2-associated protein [Homo sapiens] >gi|... 30 8.0
>gb|AAK17096.1| (AF277381) ribosomal protein L37 [Aspergillus nidulans]
gb|AAK17097.1| (AF277382) ribosomal protein L37 [Aspergillus nidulans]
Length = 92
Score = 144 bits (363), Expect = 4e-34
Identities = 65/88 (73%), Positives = 70/88 (78%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGTSSFGKRHNKTHTLCRRCGRRS HIQK C++CGYP+AK RKYNWSEKA
Sbjct: 1 MTKGTSSFGKRHNKTHTLCRRCGRRSYHIQKSTCANCGYPAAKTRKYNWSEKAKRRKTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPKGARG 313
+L+DV RRFKNGFQ GTPKGARG
Sbjct: 61 SGRTAHLRDVHRRFKNGFQVGTPKGARG 88
>sp|O44125|RL37_SCHMA 60S RIBOSOMAL PROTEIN L37
gb|AAB88508.1| (AF035770) ribosomal protein L37 [Schistosoma mansoni]
Length = 88
Score = 125 bits (313), Expect = 2e-28
Identities = 56/84 (66%), Positives = 64/84 (75%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGT+SFGKRHNK+HT CRRCGR+S HIQK CSSCGYPSA++RKYNWSEKA
Sbjct: 1 MTKGTTSFGKRHNKSHTQCRRCGRKSYHIQKKTCSSCGYPSARLRKYNWSEKAKRRRTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPK 301
+LK V RRFK GF++G PK
Sbjct: 61 TGRMLHLKRVHRRFKQGFRSGPPK 84
>ref|NP_010788.1| 60S ribosomal protein L37B (L43) (YL35); Rpl37bp [Saccharomyces
cerevisiae]
sp|P51402|R37B_YEAST 60S RIBOSOMAL PROTEIN L37-B (L35) (YP55)
pir||S69558 ribosomal protein L37.e.B, cytosolic - yeast (Saccharomyces
cerevisiae)
gb|AAB64942.1| (U33057) Rpl35bp; CAI: 0.71 [Saccharomyces cerevisiae]
Length = 88
Score = 123 bits (308), Expect = 9e-28
Identities = 56/84 (66%), Positives = 61/84 (71%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
M KGT SFGKRHNK+HTLC RCGRRS H+QK CSSCGYPSAK R +NW+ KA
Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPK 301
YLK VSRRFKNGFQTG+ K
Sbjct: 61 TGRMRYLKHVSRRFKNGFQTGSAK 84
>ref|NP_013286.1| 60S ribosomal protein L37A (L43) (YL35); Rpl37ap [Saccharomyces
cerevisiae]
sp|P49166|R37A_YEAST 60S RIBOSOMAL PROTEIN L37-A (L35) (YP55)
pir||S51430 ribosomal protein L37.e.A, cytosolic - yeast (Saccharomyces
cerevisiae)
gb|AAB67458.1| (U17246) Rpl35ap: 60S ribosomal protein L37 [Saccharomyces
cerevisiae]
Length = 88
Score = 122 bits (306), Expect = 2e-27
Identities = 56/86 (65%), Positives = 60/86 (69%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
M KGT SFGKRHNK+HTLC RCGRRS H+QK CSSCGYP+AK R YNW KA
Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPAAKTRSYNWGAKAKRRHTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPKGA 307
YLK VSRRFKNGFQTG+ A
Sbjct: 61 TGRMRYLKHVSRRFKNGFQTGSASKA 86
>gb|AAF48428.1| (AE003498) CG9091 gene product [Drosophila melanogaster]
Length = 93
Score = 120 bits (301), Expect = 6e-27
Identities = 56/93 (60%), Positives = 63/93 (67%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGTSSFGKRHNKTHTLCRRCGR S HIQK C+ CGYP+AK+R YNWS KA
Sbjct: 1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPKGARGLTAEK 328
+LK V RRF+NGF+ GT + A K
Sbjct: 61 TGRMQHLKVVRRRFRNGFREGTQAKPKKAVASK 93
>sp|P05733|R37B_SCHPO 60S RIBOSOMAL PROTEIN L37-B (L37-2) (YL27)
pir||T40865 60s ribosomal protein L37 - fission yeast (Schizosaccharomyces
pombe)
emb|CAA20874.1| (AL031579) 60s ribosomal protein L37 [Schizosaccharomyces pombe]
Length = 91
Score = 116 bits (291), Expect = 9e-26
Identities = 52/91 (57%), Positives = 60/91 (65%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGT SFG RHNK+HT+CRRCG+RS HIQK C+ CGYP+AK R YNW KA
Sbjct: 1 MTKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPKGARGLTA 322
YLK V R FKNGF++G P A +A
Sbjct: 61 TGRMSYLKKVHRSFKNGFRSGKPAAAVAASA 91
>pir||T43306 ribosomal protein L37 - fission yeast (Schizosaccharomyces pombe)
dbj|BAA24013.1| (AB009637) ribosomal protein L37 [Schizosaccharomyces pombe]
Length = 89
Score = 115 bits (289), Expect = 1e-25
Identities = 51/86 (59%), Positives = 57/86 (65%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGT SFG RHNK+HT+CRRCG+RS HIQK C+ CGYP+AK R YNW KA
Sbjct: 1 MTKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPKGA 307
YLK V R FKNGF+ G P A
Sbjct: 61 TGRMSYLKKVHRSFKNGFRAGKPTSA 86
>emb|CAB77643.1| (AJ390504) ribosomal protein L37 [Candida albicans]
Length = 88
Score = 115 bits (289), Expect = 1e-25
Identities = 51/82 (62%), Positives = 59/82 (71%)
Frame = +2
Query: 56 KGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXXXX 235
+GT S GKRHNK+HTLC RCGRRS H+QK CSSCGYP+AK+R +NW+ KA
Sbjct: 1 EGTPSLGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPAAKMRSHNWALKAKRRRTTGTG 60
Query: 236 XXXYLKDVSRRFKNGFQTGTPK 301
YLK V+RRFKNGFQTG K
Sbjct: 61 RMAYLKHVTRRFKNGFQTGVAK 82
>gb|AAF46957.1| (AE003459) CG9873 gene product [Drosophila melanogaster]
Length = 89
Score = 112 bits (280), Expect = 2e-24
Identities = 48/81 (59%), Positives = 58/81 (71%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGT+SFGKRHNKTHT+CRRCG S H+QK +CS CGYP+AK R +NWS KA
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTG 292
YLK++ RRF+NG + G
Sbjct: 61 TGRMRYLKNLRRRFRNGLREG 81
>gb|AAG51542.1|AC037424_7 (AC037424) 60S ribosomal protein L37, putative; 56921-57860
[Arabidopsis thaliana]
gb|AAK44031.1|AF370216_1 (AF370216) putative ribosomal protein L37 [Arabidopsis thaliana]
Length = 95
Score = 110 bits (274), Expect = 8e-24
Identities = 50/82 (60%), Positives = 57/82 (68%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGT SFGKR NK+HTLC RCGRRS HIQK CS+C YP+A+ R YNWS KA
Sbjct: 1 MTKGTGSFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGT 295
YL++V RRFK GF+ GT
Sbjct: 61 TGRMRYLRNVPRRFKTGFREGT 82
>ref|NP_000988.1| ribosomal protein L37 [Homo sapiens]
ref|NP_080345.1| RIKEN cDNA 3110005M08 gene [Mus musculus]
ref|NP_112368.1| ribosomal protein L37 [Rattus norvegicus]
ref|XP_017770.1| ribosomal protein L37 [Homo sapiens]
sp|P02403|RL37_HUMAN 60S RIBOSOMAL PROTEIN L37 (G1.16)
pir||JN0478 ribosomal protein L37, cytosolic - rat
pir||S47646 ribosomal protein L37, cytosolic - human
pir||R6RT37 ribosomal protein L37, cytosolic [validated] - rat
emb|CAA47012.1| (X66369) ribosomal protein L37 [Rattus norvegicus]
gb|AAA62148.1| (L11567) ribosomal protein L37 [Homo sapiens]
dbj|BAA04888.1| (D23661) ribosomal protein L37 [Homo sapiens]
gb|AAB47039.1| (S79979) ribosomal protein L37 {C2-C2 zinc-finger-like} [human,
HeLa cells, Peptide, 97 aa] [Homo sapiens]
dbj|BAB22213.1| (AK002592) putative [Mus musculus]
dbj|BAB27398.1| (AK011101) putative [Mus musculus]
dbj|BAB28307.1| (AK012544) putative [Mus musculus]
dbj|BAB29108.1| (AK014003) putative [Mus musculus]
dbj|BAB31512.1| (AK019020) putative [Mus musculus]
dbj|BAB31652.1| (AK019294) putative [Mus musculus]
Length = 97
Score = 109 bits (273), Expect = 1e-23
Identities = 52/91 (57%), Positives = 61/91 (66%), Gaps = 1/91 (1%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGTSSFGKR NKTHTLCRRCG ++ H+QK C CGYP+ + RKYNWS KA
Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTG-TPKGARGLTA 322
+LK V RRF++GF+ G TPK R A
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVA 92
>dbj|BAB25746.1| (AK008563) putative [Mus musculus]
Length = 97
Score = 107 bits (267), Expect = 5e-23
Identities = 51/91 (56%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGTSSFGKR NKTH LCRRCG ++ H+QK C CGYP+ + RKYNWS KA
Sbjct: 1 MTKGTSSFGKRRNKTHRLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTG-TPKGARGLTA 322
+LK V RRF++GF+ G TPK R A
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVA 92
>pir||T26055 hypothetical protein W01D2.1 - Caenorhabditis elegans
emb|CAB05635.1| (Z83128) predicted using Genefinder~contains similarity to Pfam
domain: PF01907 (Ribosomal protein L37e), Score=130.3,
E-value=1.2e-35, N=1~cDNA EST yk65b2.3 comes from this
gene; cDNA EST yk65b2.5 comes from this gene~cDNA EST
yk145c10.5 comes from th>
Length = 92
Score = 106 bits (265), Expect = 9e-23
Identities = 45/82 (54%), Positives = 57/82 (68%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGT +FGK+H K+HTLC+RCG+ S HIQK C+SCGYP AK R YNW K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGT 295
+L+DV+ RF+NGF+ GT
Sbjct: 61 TGRTRHLRDVNARFRNGFREGT 82
>sp|P79244|RL37_BOVIN 60S RIBOSOMAL PROTEIN L37
gb|AAD14319.1|S79980_1 (S79980) ribosomal protein L37 [Bos taurus]
Length = 93
Score = 106 bits (264), Expect = 1e-22
Identities = 51/91 (56%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGTSSFGKR NKT TLCRRCG ++ H+QK C CGYP+ + RKYNWS KA
Sbjct: 1 MTKGTSSFGKRRNKTDTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTG-TPKGARGLTA 322
+LK V RRF++GF+ G TPK R A
Sbjct: 61 TGRMRHLKIVYRRFRHGFREGTTPKPKRAAVA 92
>sp|Q43292|RL37_ARATH 60S RIBOSOMAL PROTEIN L37
Length = 95
Score = 105 bits (261), Expect = 3e-22
Identities = 50/91 (54%), Positives = 58/91 (62%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
M KGT+SFGKR NK+HTLC RCGRRS HIQK CS+C YP+A+ R YNWS KA
Sbjct: 1 MGKGTASFGKRRNKSHTLCVRCGRRSFHIQKSRCSACAYPAARKRTYNWSVKAIRRKTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPKGARGLTA 322
YL++V RRFK F+ GT R A
Sbjct: 61 TGRMRYLRNVPRRFKTCFREGTQATPRNKAA 91
>sp|P49622|RL37_CAEEL PROBABLE 60S RIBOSOMAL PROTEIN L37
pir||T20195 hypothetical protein C54C6.1 - Caenorhabditis elegans
emb|CAB00854.1| (Z77131) predicted using Genefinder~Similarity to putative
C.elegans 60S ribosomal protein L37 (SW:RL37_CAEEL),
contains similarity to Pfam domain: PF01907 (Ribosomal
protein L37e), Score=127.1, E-value=1.1e-34, N=1~cDNA
EST CEMSB96R comes from this ge>
Length = 91
Score = 104 bits (260), Expect = 3e-22
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGT +FGK+H K+HTLC+RCG+ S HIQK C+SCGY AK R YNW K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGTPK 301
+L+DV+ RF+NGF+ TPK
Sbjct: 61 TGRTRHLRDVNARFRNGFRGTTPK 84
>sp|P39094|RL37_LEIIN 60S RIBOSOMAL PROTEIN L37
gb|AAA29264.1| (L16952) ribsomal protein L37 [Leishmania infantum]
gb|AAA79065.1| (U35461) RPL37 [Leishmania donovani]
gb|AAA79066.1| (U35460) RPL37 [Leishmania infantum]
gb|AAF70539.1|AC009603_11 (AC009603) Ribosomal Protein L37 [Leishmania major]
gb|AAF77201.1|AC005801_7 (AC005801) Ribosomal Protein L37 [Leishmania major]
Length = 83
Score = 94.0 bits (232), Expect = 6e-19
Identities = 42/80 (52%), Positives = 51/80 (63%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGT+S G+RH +TH LCRRCGR S H+Q C++C YP A R+YNWS KA
Sbjct: 1 MTKGTTSMGQRHGRTHILCRRCGRNSYHVQWERCAACAYPRASRRRYNWSVKAIKRRRTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQT 289
YLK V+RR N F+T
Sbjct: 61 TGRCRYLKVVNRRIANHFKT 80
>ref|XP_003722.3| similar to ribosomal protein L37 (H. sapiens) [Homo sapiens]
Length = 97
Score = 92.0 bits (227), Expect = 2e-18
Identities = 43/82 (52%), Positives = 51/82 (61%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKGTS FGKR NKTHTLC R G ++ H+QK C CGY + + RKYNWS KA
Sbjct: 1 MTKGTSLFGKRRNKTHTLCCRRGSKAYHLQKSTCGKCGYAAKRKRKYNWSAKAKRQNTTG 60
Query: 230 XXXXXYLKDVSRRFKNGFQTGT 295
+LK V RF++GF GT
Sbjct: 61 TGGMRHLKIVYHRFRHGFYEGT 82
>gb|AAB63862.1| (U97370) 60S ribosomal protein homolog [Schizosaccharomyces pombe]
Length = 60
Score = 89.4 bits (220), Expect = 1e-17
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEK 205
M KGT SFG RHNK+HT+CRRCG+RS HIQK C CGYP+AK R YNW K
Sbjct: 1 MAKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCGMCGYPAAKTRSYNWGAK 52
>ref|XP_016266.1| similar to ribosomal protein L37 (H. sapiens) [Homo sapiens]
Length = 70
Score = 81.6 bits (200), Expect = 3e-15
Identities = 37/70 (52%), Positives = 42/70 (59%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEKAXXXXXXX 229
MTKG SSFGK NKTHTLCR CG + H+QK C CGY + + RKYNWS KA
Sbjct: 1 MTKGASSFGKHRNKTHTLCRCCGSEAYHLQKSTCGKCGYSAKRKRKYNWSAKAKRRKTTR 60
Query: 230 XXXXXYLKDV 259
+LK V
Sbjct: 61 TGRMRHLKIV 70
>sp|P54011|RL37_METJA 50S RIBOSOMAL PROTEIN L37E
pir||B64312 ribosomal protein L37 - Methanococcus jannaschii
gb|AAB98078.1| (U67467) LSU ribosomal protein L37E [Methanococcus jannaschii]
Length = 61
Score = 68.9 bits (167), Expect = 2e-11
Identities = 27/52 (51%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Frame = +2
Query: 50 MTKGTSSFGKRHNKT-HTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSEK 205
M+KGT S GKR+ + H CRRCGRR+ H++K C++CG+P+ ++RKY+W K
Sbjct: 1 MSKGTPSMGKRNKGSYHIRCRRCGRRAYHVRKKRCAACGFPNKRMRKYSWQNK 53
>sp|O26744|RL37_METTH 50S RIBOSOMAL PROTEIN L37E
pir||B69186 ribosomal protein L37 - Methanobacterium thermoautotrophicum
(strain Delta H)
gb|AAB85153.1| (AE000845) ribosomal protein L37 [Methanothermobacter
thermautotrophicus]
Length = 60
Score = 63.9 bits (154), Expect = 7e-10
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +2
Query: 56 KGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGY-PSAKIRKYNWSEK 205
KGT SFGKR+ H CRRCG+ S H++K C++CG+ S +IR+Y+W K
Sbjct: 2 KGTPSFGKRNKNLHIRCRRCGKNSYHVRKKVCAACGFGRSRRIRRYSWQNK 52
>sp|P32410|RL37_HALMA 50S RIBOSOMAL PROTEIN L37E (L35E)
pir||S33789 ribosomal protein L37.eR [validated] - Haloarcula marismortui
pdb|1FFK|X Chain X, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
gb|AAB26934.1| 50S ribosomal subunit protein HL35e [Haloarcula marismortui,
Peptide, 56 aa]
Length = 56
Score = 63.2 bits (152), Expect = 1e-09
Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Frame = +2
Query: 59 GTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGY-PSAKIRKYNWSEKA 208
GT S GK++ THT CRRCG +S H +K CSSCG+ SAK R Y W KA
Sbjct: 4 GTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKA 54
>gb|AAG19794.1| (AE005064) 50S ribosomal protein L37E; Rpl37e [Halobacterium sp.
NRC-1]
Length = 58
Score = 60.8 bits (146), Expect = 6e-09
Identities = 28/49 (57%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 59 GTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGY-PSAKIRKYNWSEK 205
GT S GK++ THT CRRCG +S H +K CSSCG+ SAK R Y W K
Sbjct: 5 GTPSQGKKNTTTHTKCRRCGEKSYHTKKKVCSSCGFGASAKRRDYEWQGK 54
>gb|AAK41052.1| (AE006699) LSU ribosomal protein L37E (rpl37E) [Sulfolobus
solfataricus]
Length = 61
Score = 59.7 bits (143), Expect = 1e-08
Identities = 26/50 (52%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Frame = +2
Query: 56 KGTSSFGKRHNK-THTLCRRCGRRSLHIQKHECSSCGY-PSAKIRKYNWSEK 205
KGT SFGK + TH CRRCGR + ++ KH C++CG+ + KIR+Y+W K
Sbjct: 2 KGTPSFGKMNKSHTHIRCRRCGRNAYNVSKHYCAACGFGRTKKIRRYSWQNK 53
>sp|Q9YEQ4|RL37_AERPE 50S RIBOSOMAL PROTEIN L37E
pir||H72749 probable ribosomal protein L37 APES023 - Aeropyrum pernix (strain
K1)
dbj|BAA79492.1| (AP000059) 62aa long hypothetical 50S ribosomal protein L37
[Aeropyrum pernix]
Length = 62
Score = 59.7 bits (143), Expect = 1e-08
Identities = 27/52 (51%), Positives = 38/52 (72%), Gaps = 2/52 (3%)
Frame = +2
Query: 50 MTKGTSSFGKR-HNKTHTLCRRCGRRSLHIQKHECSSCGY-PSAKIRKYNWSEK 205
M KGT S GK +KTH +CRRCGRRS ++ K C++CG+ S ++R+Y+W K
Sbjct: 1 MGKGTPSMGKHGRSKTHIVCRRCGRRSYNVAKGYCAACGFGRSRRMRRYSWQNK 54
>ref|NP_126333.1| LSU ribosomal protein L37E [Pyrococcus abyssi]
sp|O74015|RL37_PYRHO 50S RIBOSOMAL PROTEIN L37E
pir||C71028 probable ribosomal proteinL37 - Pyrococcus horikoshii
pir||C75106 lsu ribosomal protein l37e (rpl37e) PAB7160 - Pyrococcus abyssi
(strain Orsay)
dbj|BAA30627.1| (AP000006) 62aa long hypothetical 50S ribosomal proteinL37
[Pyrococcus horikoshii]
emb|CAB49564.1| (AJ248285) LSU ribosomal protein L37E (rpl37E) [Pyrococcus abyssi]
Length = 62
Score = 59.3 bits (142), Expect = 2e-08
Identities = 26/52 (50%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = +2
Query: 50 MTKGTSSFGKRHNK-THTLCRRCGRRSLHIQKHECSSCGY-PSAKIRKYNWSEK 205
M+ GT S GKR+ TH CRRCGR++ +++K C++CG+ S ++RKY WS+K
Sbjct: 1 MSSGTPSLGKRNKTPTHIRCRRCGRKAFNVKKGYCAACGFGRSRRLRKYRWSKK 54
>ref|NP_110874.1| 50S ribosomal protein L37E [Thermoplasma volcanium]
dbj|BAB59501.1| (AP000992) ribosomal protein large subunit L37 [Thermoplasma
volcanium]
Length = 54
Score = 58.5 bits (140), Expect = 3e-08
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 50 MTKGTSSFGKRHNK-THTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSE 202
M+ GT+ GK +NK TH CRRCG + +++ CS CG+P+ +IR Y W++
Sbjct: 1 MSNGTAVMGKINNKKTHITCRRCGHHTYNVRTKRCSHCGFPAPRIRSYKWAK 52
>sp|P49212|RL37_LYCES 60S RIBOSOMAL PROTEIN L37
pir||S44313 ribosomal protein L37, cytosolic - tomato (fragment)
emb|CAA55674.1| (X79074) ribosomal protein L37 [Lycopersicon esculentum]
Length = 64
Score = 58.2 bits (139), Expect = 4e-08
Identities = 25/54 (46%), Positives = 32/54 (58%)
Frame = +2
Query: 149 CSSCGYPSAKIRKYNWSEKAXXXXXXXXXXXXYLKDVSRRFKNGFQTGTPKGAR 310
CS+C YP+A++RKYNWS KA YL++V RRFK F+ GT R
Sbjct: 3 CSACAYPAARLRKYNWSVKALRRKTTGTGRMRYLRNVPRRFKTNFREGTEAAPR 56
>emb|CAC12365.1| (AL445067) probable ribosomal protein L37 [Thermoplasma
acidophilum]
Length = 54
Score = 58.2 bits (139), Expect = 4e-08
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 50 MTKGTSSFGKRHNK-THTLCRRCGRRSLHIQKHECSSCGYPSAKIRKYNWSE 202
M+ GT+ GK +NK TH CRRCG + +++ CS CG+P+ +IR Y W++
Sbjct: 1 MSNGTAVMGKINNKKTHIRCRRCGHHTYNVRTKRCSHCGFPAPRIRSYRWAK 52
>ref|NP_069708.1| LSU ribosomal protein L37E (rpl37E) [Archaeoglobus fulgidus]
sp|O29387|RL37_ARCFU 50S RIBOSOMAL PROTEIN L37E
pir||B69359 LSU ribosomal protein L37E (rpl37E) homolog - Archaeoglobus
fulgidus
gb|AAB90373.1| (AE001044) LSU ribosomal protein L37E (rpl37E) [Archaeoglobus
fulgidus]
Length = 59
Score = 55.1 bits (131), Expect = 3e-07
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Frame = +2
Query: 50 MTKGTSSFGKRHNK-THTLCRRCGRRSLHIQKHECSSCGY-PSAKIRKYNWSEK 205
M+ GT++ GK+ K H CRRCGR S H +K C++CG+ S ++R YNW K
Sbjct: 1 MSDGTAAMGKKGRKRVHIRCRRCGRHSFHRRKGYCAACGFGRSKRLRSYNWVRK 54
>sp|P22667|R37A_SCHPO 60S RIBOSOMAL PROTEIN L37-A (YL35)
Length = 30
Score = 53.5 bits (127), Expect = 9e-07
Identities = 23/29 (79%), Positives = 25/29 (85%)
Frame = +2
Query: 56 KGTSSFGKRHNKTHTLCRRCGRRSLHIQK 142
KGT SFGKRHNK+HTLC RCGRRS +QK
Sbjct: 2 KGTPSFGKRHNKSHTLCNRCGRRSGALQK 30
>pir||S10052 ribosomal protein L37.e - fission yeast (Schizosaccharomyces pombe)
(fragment)
Length = 28
Score = 40.4 bits (93), Expect = 0.008
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +2
Query: 53 TKGTSSFGKRHNKTHTLCRRCGRRSLHIQK 142
TKGT SFG RH+K+HT+ RR G+ H+QK
Sbjct: 1 TKGTZSFGMRHBKSHTIGRRKGK--FHVQK 28
>pir||T42731 atrophin-1 related protein - rat
gb|AAA98970.1| (U44091) atrophin-1 related protein [Rattus norvegicus]
Length = 1006
Score = 34.7 bits (78), Expect = 0.43
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Frame = +3
Query: 96 TPCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDDSR 275
TP + L S + + + LP S S P++ E+P PA LA + P +
Sbjct: 313 TPQSSQGQGPLGPSPAAAHPHSTIQLPASQSALQPQQPPREQPLPPAPLAMPHIKPPPTT 372
Query: 276 TVSRLAHPRA--------------LVALLPRRPKWDRIPSDPLHH--LSGPTPLLSRTFE 407
+ +L P+A + A LP P + S HH + P PL
Sbjct: 373 PIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 432
Query: 408 TPIPSS 425
P+PSS
Sbjct: 433 QPLPSS 438
>dbj|BAA32303.1| (AB007927) KIAA0458 protein [Homo sapiens]
Length = 1268
Score = 34.7 bits (78), Expect = 0.43
Identities = 32/125 (25%), Positives = 49/125 (38%)
Frame = +3
Query: 99 PCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDDSRT 278
P A A L TS + + LP S S ++ E+P PA LA + P +
Sbjct: 608 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 667
Query: 279 VSRLAHPRALVALLPRRPKWDRIPSDPLHHLSGPTPLLSRTFETPIPSSTHTSTMTALS* 458
+ +L P+A + P HLSGP+P P P+ S+++
Sbjct: 668 IPQLPAPQA-----HKHPP----------HLSGPSPFSMNANLPPPPALKPLSSLSRSDP 712
Query: 459 RELRP 473
R + P
Sbjct: 713 RRITP 717
>dbj|BAA95898.1| (AB036737) RERE [Homo sapiens]
Length = 1566
Score = 33.9 bits (76), Expect = 0.73
Identities = 34/109 (31%), Positives = 48/109 (43%), Gaps = 16/109 (14%)
Frame = +3
Query: 99 PCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDDSRT 278
P A A L TS + + LP S S ++ E+P P LA + P +
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPGPLAMPHIKPPPTTP 935
Query: 279 VSRLAHPRA--------------LVALLPRRPKWDRIPSDPLHH--LSGPTPLLSRTFET 410
+ +LA P+A + A LP P + S HH + P PL
Sbjct: 936 IPQLAAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 995
Query: 411 PIPSS 425
P+PSS
Sbjct: 996 PLPSS 1000
>ref|NP_036234.1| arginine-glutamic acid dipeptide (RE) repeats; atrophin 1-like;
arginine glutamic acid dipeptide RE repeats [Homo
sapiens]
gb|AAD27584.1|AF118275_1 (AF118275) atrophin-related protein ARP [Homo sapiens]
Length = 995
Score = 33.9 bits (76), Expect = 0.73
Identities = 31/116 (26%), Positives = 47/116 (39%)
Frame = +3
Query: 99 PCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDDSRT 278
P A A L TS + + LP S S ++ E+P PA LA + P +
Sbjct: 305 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 364
Query: 279 VSRLAHPRALVALLPRRPKWDRIPSDPLHHLSGPTPLLSRTFETPIPSSTHTSTMT 446
+ +L P+A + P HLSGP+PL P P+ S+++
Sbjct: 365 IPQLPAPQA-----HKHPP----------HLSGPSPLSMNANLPPPPALKPLSSLS 405
>gb|AAC31120.1| (AF016005) atrophin-1 related protein [Homo sapiens]
Length = 1012
Score = 33.5 bits (75), Expect = 0.95
Identities = 34/109 (31%), Positives = 48/109 (43%), Gaps = 16/109 (14%)
Frame = +3
Query: 99 PCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDDSRT 278
P A A L TS + + LP S S ++ E+P PA LA + P +
Sbjct: 322 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 381
Query: 279 VSRLAHPRA--------------LVALLPRRPKWDRIPSDPLHH--LSGPTPLLSRTFET 410
+ +L P+A + A LP P + S HH + P PL
Sbjct: 382 IPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 441
Query: 411 PIPSS 425
P+PSS
Sbjct: 442 PLPSS 446
>gb|AAC28264.1| (AF041104) atrophin-1 like protein [Homo sapiens]
Length = 1012
Score = 33.5 bits (75), Expect = 0.95
Identities = 34/109 (31%), Positives = 48/109 (43%), Gaps = 16/109 (14%)
Frame = +3
Query: 99 PCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDDSRT 278
P A A L TS + + LP S S ++ E+P PA LA + P +
Sbjct: 322 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTP 381
Query: 279 VSRLAHPRA--------------LVALLPRRPKWDRIPSDPLHH--LSGPTPLLSRTFET 410
+ +L P+A + A LP P + S HH + P PL
Sbjct: 382 IPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQ 441
Query: 411 PIPSS 425
P+PSS
Sbjct: 442 PLPSS 446
>ref|XP_003403.3| SH3-domain binding protein 2 [Homo sapiens]
Length = 310
Score = 33.5 bits (75), Expect = 0.95
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 19/110 (17%)
Frame = +3
Query: 114 AVAALSTSRSMSALLAVTLLPRSASTTGP----------RRLSEERPSVPAALATSRMCP 263
A+ A +TSR+ L + L PR T+ P +++EE P AA+ + P
Sbjct: 123 AIMATATSRNCDKLKSFHLSPRGPPTSEPPPVPANKPKFLKIAEEDPPREAAMPGLFVPP 182
Query: 264 DDSRTVS-RLAHPRALV--ALLPR--RPKWDRIPSD--PLHHLSGPTPLLS--RTFETPI 416
R + +L P A+ A+LPR +P+ + D P+ +SG +PL S +
Sbjct: 183 VAPRPPALKLPVPEAMARPAVLPRPEKPQLPHLXXDHPPMGRVSGASPLKSPGNPHRLTL 242
Query: 417 PSSTHTSTM 443
+T T TM
Sbjct: 243 AGTTRTRTM 251
>sp|Q9X4E5|TRPB_RHOSH TRYPTOPHAN SYNTHASE BETA CHAIN
gb|AAD29261.1|AF107093_6 (AF107093) tryptophan synthase beta chain [Rhodobacter sphaeroides]
Length = 409
Score = 33.1 bits (74), Expect = 1.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 427 VLEGMGVSNVRDRRGVGPERWWRGSEGMRSHLGLLGSKATSALG-CASLETVL 272
+LEG +S D G+GPE W G ++ + ++A A C +LE ++
Sbjct: 307 ILEGFSISAGLDYPGIGPEHAWLHDTGRAEYVSITDAEALEAFQLCCALEGII 359
>ref|NP_014805.1| Yrr1p [Saccharomyces cerevisiae]
pir||S67050 probable membrane protein YOR162c - yeast (Saccharomyces
cerevisiae)
gb|AAB47409.1| (U55021) O3571p [Saccharomyces cerevisiae]
emb|CAA99368.1| (Z75070) ORF YOR162c [Saccharomyces cerevisiae]
Length = 810
Score = 32.7 bits (73), Expect = 1.6
Identities = 21/47 (44%), Positives = 27/47 (56%), Gaps = 8/47 (17%)
Frame = +2
Query: 20 PTNRPNTTAKMTKG------TSSFGKRHNKTHTLCRRCGRRSLHI--QKHECSSC 160
P++ N+TA G TS+ GK+ NK C C RR L QK CS+C
Sbjct: 20 PSDNSNSTAGGANGSNSGTPTSTSGKKRNKLIKSCGFCRRRKLRCDQQKPMCSTC 74
>gb|AAF55152.1| (AE003708) CG4285 gene product [Drosophila melanogaster]
Length = 1001
Score = 32.0 bits (71), Expect = 2.8
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 157 RRALMLLDVERAATASSAQGVRLVVTLTEAGGTLRHLGCG 38
R A L +RA ++S+ Q L+ GGTLR GCG
Sbjct: 519 RHAATLSYGQRAKSSSNLQAQDLITAAASGGGTLRRSGCG 558
>pir||A70894 hypothetical protein Rv1075c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAA17191.1| (AL021897) hypothetical protein Rv1075c [Mycobacterium
tuberculosis]
Length = 314
Score = 31.6 bits (70), Expect = 3.6
Identities = 15/38 (39%), Positives = 18/38 (46%)
Frame = -3
Query: 388 RGVGPERWWRGSEGMRSHLGLLGSKATSALGCASLETV 275
RG GP + WR HL + G + GCAS E V
Sbjct: 56 RGGGPVQRWRREVPFDVHLMIFGDSTATGYGCASAEEV 93
>gb|AAK45361.1| (AE006991) hypothetical protein [Mycobacterium tuberculosis
CDC1551]
Length = 318
Score = 31.6 bits (70), Expect = 3.6
Identities = 15/38 (39%), Positives = 18/38 (46%)
Frame = -3
Query: 388 RGVGPERWWRGSEGMRSHLGLLGSKATSALGCASLETV 275
RG GP + WR HL + G + GCAS E V
Sbjct: 60 RGGGPVQRWRREVPFDVHLMIFGDSTATGYGCASAEEV 97
>ref|NP_038636.1| nascent polypeptide-associated complex alpha polypeptide [Mus
musculus]
pir||T30826 nascent polypeptide-associated complex alpha chain, muscle splice
form gp220 - mouse
gb|AAB18732.1| (U48363) alpha-NAC, muscle-specific form gp220 [Mus musculus]
gb|AAB18734.1| (U48364) alpha-NAC, muscle-specific form gp220 [Mus musculus]
Length = 2187
Score = 31.6 bits (70), Expect = 3.6
Identities = 30/108 (27%), Positives = 44/108 (39%), Gaps = 2/108 (1%)
Frame = +3
Query: 90 RRTPCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDD 269
++ P +DAV L+ S L P+ AS T + + PSV + + P
Sbjct: 1159 KQIPTPEDAVTILAGS---------PLSPKKASKTAAPKEAPATPSVGVIAVSGEISPSP 1209
Query: 270 SRTVSRLAHPRALVALLP--RRPKWDRIPSDPLHHLSGPTPLLSRTFETP 413
+T S+ A P+ A LP R PK P G T + S +P
Sbjct: 1210 KKT-SKTAAPKENSATLPPKRSPKTAAPKETPATSSEGVTAVPSEISPSP 1258
>pir||F70947 hypothetical protein Rv3168 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAA16633.1| (AL021646) hypothetical protein Rv3168 [Mycobacterium tuberculosis]
gb|AAK47596.1| (AE007139) hypothetical protein [Mycobacterium tuberculosis
CDC1551]
Length = 378
Score = 31.6 bits (70), Expect = 3.6
Identities = 23/58 (39%), Positives = 25/58 (42%)
Frame = +3
Query: 234 AALATSRMCPDDSRTVSRLAHPRALVALLPRRPKWDRIPSDPLHHLSGPTPLLSRTFE 407
AALAT P+ T S L R L R W R D G +PLL RTFE
Sbjct: 171 AALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFE 228
>ref|NP_033495.1| Unc-51 like kinase 1 (C. elegans); Unc-51 like kinase 1 [Mus
musculus]
sp|O70405|ULK1_MOUSE SERINE/THREONINE-PROTEIN KINASE ULK1 (UNC-51-LIKE KINASE 1)
pir||JW0051 serine/threonine-specific protein kinase (EC 2.7.1.-) ULK1 - mouse
gb|AAC40118.1| (AF053756) UNC-51-like kinase ULK1 [Mus musculus]
gb|AAF23317.1|AF072370_1 (AF072370) UNC51.1 serine/threonine kinase [Mus musculus]
Length = 1051
Score = 31.2 bits (69), Expect = 4.7
Identities = 20/59 (33%), Positives = 25/59 (41%)
Frame = +3
Query: 177 RSASTTGPRRLSEERPSVPAALATSRMCPDDSRTVSRLAHPRALVALLPRRPKWDRIPS 353
RS STT P PS P+ + + S R P V +P RP W R+PS
Sbjct: 464 RSGSTT-PLGFGRASPSPPSHTDGAMLARKLSLGGGRPYTPSPQVGTIPERPSWSRVPS 521
>gb|AAF73150.1|AF149092_1 (AF149092) SH3 domain-containing adaptor protein METS-1 [Mus
musculus]
Length = 637
Score = 31.2 bits (69), Expect = 4.7
Identities = 22/79 (27%), Positives = 34/79 (42%)
Frame = +3
Query: 174 PRSASTTGPRRLSEERPSVPAALATSRMCPDDSRTVSRLAHPRALVALLPRRPKWDRIPS 353
P A + L E++PS PAA P S L R+ A+ P+RP+ P
Sbjct: 363 PLKAEEKDEKSLLEQKPSKPAAPQVPPKKPTAPTKASNLL--RSPGAVYPKRPEKPVPPP 420
Query: 354 DPLHHLSGPTPLLSRTFET 410
P ++G ++S +T
Sbjct: 421 PPAAKINGEVSIISSKIDT 439
>gb|AAB26348.1| (S61526) putative helicase [Plantago asiatica mosaic virus,
Peptide, 230 aa]
Length = 230
Score = 31.2 bits (69), Expect = 4.7
Identities = 21/84 (25%), Positives = 35/84 (41%)
Frame = +3
Query: 117 VAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDDSRTVSRLAH 296
+ L+ + + L LLP + S + P++ A CP +S ++ L
Sbjct: 24 LVVLAVAGAGKTTLIQNLLPEHPNLAAQTAGSPQTPNLTGAFIRKLTCP-ESNKINLLDE 82
Query: 297 PRALVALLPRRPKWDRIPSDPLHH 368
AL P + WD + +DPL H
Sbjct: 83 ---YAALQPLKGSWDVVLADPLQH 103
>pir||T39233 probable Inositol polyphosphate phosphatase - fission yeast
(Schizosaccharomyces pombe)
Length = 1183
Score = 31.2 bits (69), Expect = 4.7
Identities = 32/102 (31%), Positives = 48/102 (46%), Gaps = 9/102 (8%)
Frame = +3
Query: 114 AVAALSTSRSM-SALLAVTLLPRSASTTGPRRLSEERPSVPAA-LATSRMCPDDSRTVSR 287
AV A+ SR++ S L + + PR R++S +R S P LAT D+ V+
Sbjct: 282 AVEAIQQSRAVISQQLPLHVSPRKPPKPPLRKVSTQRSSSPIENLATK----SDASLVTG 337
Query: 288 LAH-------PRALVALLPRRPKWDRIPSDPLHHLSGPTPLLSRTFETPIP 419
L P + ++L+P +P+ PS L LS P P P
Sbjct: 338 LQSSPYTHIAPASEMSLIPEKPRLPPRPSHTLSELSSPALTSENLSSKPSP 388
>gb|AAK28280.1| (AF339907) unknown [Leishmania major]
Length = 693
Score = 31.2 bits (69), Expect = 4.7
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = +3
Query: 231 PAALATSRMCPDDSRTVSRLAHPRALVALLPRRPKWDRIPSDPLHHLSGPTPLLSRTFET 410
P L+T+ + + + PR+ + + P P P L+ P L + T +T
Sbjct: 364 PRYLSTTLVVRGQPNSTIAIPMPRSAKSCRGKSPSGPPAPGTPSQPLADPAILSAETVKT 423
Query: 411 PIPSSTHTSTMTALS*RELR 470
P+P+ S+ T + R +R
Sbjct: 424 PMPAPQTNSSATEIIQRLMR 443
>emb|CAB11494.2| (Z98763) putative Inositol polyphosphate phosphatase
[Schizosaccharomyces pombe]
Length = 1191
Score = 31.2 bits (69), Expect = 4.7
Identities = 32/102 (31%), Positives = 48/102 (46%), Gaps = 9/102 (8%)
Frame = +3
Query: 114 AVAALSTSRSM-SALLAVTLLPRSASTTGPRRLSEERPSVPAA-LATSRMCPDDSRTVSR 287
AV A+ SR++ S L + + PR R++S +R S P LAT D+ V+
Sbjct: 282 AVEAIQQSRAVISQQLPLHVSPRKPPKPPLRKVSTQRSSSPIENLATK----SDASLVTG 337
Query: 288 LAH-------PRALVALLPRRPKWDRIPSDPLHHLSGPTPLLSRTFETPIP 419
L P + ++L+P +P+ PS L LS P P P
Sbjct: 338 LQSSPYTHIAPASEMSLIPEKPRLPPRPSHTLSELSSPALTSENLSSKPSP 388
>gb|AAF35992.1|AC005836_4 (AC005836) L509.4 [Leishmania major]
Length = 2083
Score = 31.2 bits (69), Expect = 4.7
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +3
Query: 87 TRRTPCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPD 266
TR P A D+ AL+ + + ++P+S + P+R E ++ AL S + PD
Sbjct: 1296 TRAPPGASDSTGALTKRDDAGSTASRGVVPQSTAAMPPKRRHEAEVAMRRAL--SEVSPD 1353
Query: 267 DSRTVSRLAHPRALVALLPRR 329
R V L + +V RR
Sbjct: 1354 TRRWVQDLPYRVTVVLKKHRR 1374
>dbj|BAA36937.1| (AB019241) c-myc [Oryctolagus cuniculus]
Length = 108
Score = 31.2 bits (69), Expect = 4.7
Identities = 21/47 (44%), Positives = 24/47 (50%)
Frame = +3
Query: 99 PCADDAVAALSTSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAA 239
PCA +A S S +SALL L SA + P L EE P PAA
Sbjct: 63 PCASPESSAFSPSLGLSALLQRVL---SAGSPEPLVLHEETPPPPAA 106
>gb|AAF47121.1| (AE003462) CG10904 gene product [Drosophila melanogaster]
Length = 266
Score = 30.8 bits (68), Expect = 6.2
Identities = 21/69 (30%), Positives = 29/69 (41%)
Frame = +3
Query: 135 SRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPDDSRTVSRLAHPRALVA 314
S+S L ++ A P ++SE P +P A S D +RTV A P
Sbjct: 156 SQSSIESLESMIIENDAEICQPPKVSEPIPPMPPEPAPSSKFVDPNRTVEAPAAPSPFHL 215
Query: 315 LLPRRPKWD 341
L R +WD
Sbjct: 216 PLSGRDQWD 224
>gb|AAC69930.1| (AC005819) putative extensin [Arabidopsis thaliana]
Length = 394
Score = 30.8 bits (68), Expect = 6.2
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 321 PRRPKWDRIP--SDPLHHLSGPTPLLSRTFETPIPSSTHTSTMTALS*RELRP 473
P P +R P S P H+S PTP + T P P S++TS + +E P
Sbjct: 83 PTSPPQERSPYHSPPSRHMSPPTPPKAATPPPPPPRSSYTSPPSPKEVQEALP 135
>gb|AAD54006.1|AF088856_5 (AF088856) IgiC [Vogesella indigofera]
Length = 276
Score = 30.8 bits (68), Expect = 6.2
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 36/150 (24%)
Frame = -3
Query: 532 TNTAARPSHRLAPVPTIFPYGLSSRYERAVIVDVCVLEGMGVSNV--------------- 398
TNT+A+P + + PYG+++ R VIVD ++ G ++V
Sbjct: 42 TNTSAQPE-----MDDMRPYGVTNHVGRMVIVDQSLVAEPGFNSVIQAMRRATEPAIKSL 96
Query: 397 ------RDRRGVGPERWWRGSEGMRSHLGLLGSKATS-ALGCA--SLETVLESSGHILEV 245
R V P+ +WRG E L L A + C+ ++E L G + +
Sbjct: 97 QDCQLDRIIVAVSPDAYWRGVEAHAQMLAQLQDTAGGVGITCSADAIEEALARLGGVRRI 156
Query: 244 XXXXXXXXXXXXXXXGPVV-----------LADLGRRVTARRA-LMLLDVERAATASSAQ 101
V LA+LG + +R A + L D+ A ++A
Sbjct: 157 GLISPYTAIGNEAVAQFFVDKGYEVVALANLANLGGQSPSRIAEVSLQDLRNAVDTANAP 216
Query: 100 GVRLVV 83
GV +V
Sbjct: 217 GVEAIV 222
>gb|AAK61254.1|AE006464_22 (AE006464) Similar to pre-pro-megakarycyte potentiating factor
precursor [Homo sapiens]
Length = 1053
Score = 30.8 bits (68), Expect = 6.2
Identities = 29/108 (26%), Positives = 49/108 (44%), Gaps = 5/108 (4%)
Frame = +3
Query: 123 ALSTSRSMSALLAVTLLPR--SASTTGPRRLSEERPSVPAALATSRMCPDDSRT---VSR 287
ALS S +AL T LP SA T RR ++ P V +++ P + V
Sbjct: 19 ALSASPGPTALGPSTFLPWDVSARMTSARRRTDVGPRVAFTYPCTQLSPTRAHRHLPVHT 78
Query: 288 LAHPRALVALLPRRPKWDRIPSDPLHHLSGPTPLLSRTFETPIPSSTHTSTMT 446
+ +P L P R +P + + P+P + + P+ + T+T T++
Sbjct: 79 VTYP--CTQLSPTRAHSCHLPMHTVTYPCTPSPTRAHSCHLPVHTVTYTCTLS 129
>ref|NP_034699.1| inversin [Mus musculus]
pir||T30255 inversin - mouse
emb|CAA09388.1| (AJ010902) inversin [Mus musculus]
Length = 1062
Score = 30.8 bits (68), Expect = 6.2
Identities = 16/54 (29%), Positives = 25/54 (45%)
Frame = +2
Query: 17 HPTNRPNTTAKMTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAK 178
HP + + +GTSS KR +T+ RRC ++ C+ G P+ K
Sbjct: 707 HPRSWEGGNSSKNQGTSSVEKRRGETNGKHRRCEEGPSSARQPLCTGSGRPAEK 760
>pir||T14151 Inv protein - mouse
gb|AAC34976.3| (AF034860) Inv [Mus musculus]
Length = 1062
Score = 30.8 bits (68), Expect = 6.2
Identities = 16/54 (29%), Positives = 25/54 (45%)
Frame = +2
Query: 17 HPTNRPNTTAKMTKGTSSFGKRHNKTHTLCRRCGRRSLHIQKHECSSCGYPSAK 178
HP + + +GTSS KR +T+ RRC ++ C+ G P+ K
Sbjct: 707 HPRSWEGGNSSKNQGTSSVEKRRGETNGKHRRCEEGPSSARQPLCTGSGRPAEK 760
>sp|Q07517|VHEL_P1AMV PUTATIVE HELICASE (ORF 2)
pir||S34231 hypothetical protein, 25K - Plantago asiatica mosaic virus
emb|CAA79762.1| (Z21647) 25K-protein [Plantago asiatica mosaic virus]
Length = 230
Score = 30.8 bits (68), Expect = 6.2
Identities = 24/79 (30%), Positives = 38/79 (47%), Gaps = 9/79 (11%)
Frame = +3
Query: 132 TSRSMSALLAVTLLPRSASTTGPRRLSEERPSVPAALATSRMCPD-DSRTVSRLAHPRA- 305
T+ +S L V + + TT + L E P++ A A S P+ + +L P +
Sbjct: 16 TNTPISKPLVVHAVAGAGKTTLIQNLLPEHPNLAAQTAGSPQTPNLTGAFIRKLTCPESN 75
Query: 306 -------LVALLPRRPKWDRIPSDPLHH 368
AL P + WD + +DPL H
Sbjct: 76 KINLLDEYAALQPLKGSWDVVLADPLQH 103
>gb|AAF58248.1| (AE003814) CG17385 gene product [Drosophila melanogaster]
Length = 278
Score = 30.8 bits (68), Expect = 6.2
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Frame = +2
Query: 17 HPTNRPNTTAKMTKGTS--SFGKRHNKTHT-----LCRRCGR---RSLHIQKHECSSCGY 166
H RP T K + S KRH THT C+RCGR + ++++KH+ G+
Sbjct: 96 HSGERPFTCNFCNKSFTQQSNMKRHKMTHTGEKPFRCQRCGRYFSQLVNLKKHK---LGH 152
Query: 167 PSAKIRKYNWSEK 205
+AK + N+ EK
Sbjct: 153 LNAKPYQCNYCEK 165
>dbj|BAB02674.1| (AB012247) gene_id:MSL1.12~unknown protein [Arabidopsis thaliana]
Length = 123
Score = 30.8 bits (68), Expect = 6.2
Identities = 16/35 (45%), Positives = 20/35 (56%)
Frame = +1
Query: 130 PHPEA*VLFLRLPFCQDPQVQLVREG*AKKDRRYR 234
PHPE +L L LP C +QL EG ++D YR
Sbjct: 26 PHPEESLLGLCLPSCSQEDLQLECEGHQEEDYWYR 60
>emb|CAA08915.1| (AJ009956) alpha-galactosidase 1 [Penicillium simplicissimum]
Length = 435
Score = 30.8 bits (68), Expect = 6.2
Identities = 19/58 (32%), Positives = 25/58 (42%)
Frame = +3
Query: 279 VSRLAHPRALVALLPRRPKWDRIPSDPLHHLSGPTPLLSRTFETPIPSSTHTSTMTAL 452
+ R AHP P W P+ P + SGP+ L T + S TST TA+
Sbjct: 333 IGRSAHPYKW----GYNPDWTFDPAHPAEYWSGPSSTLKGTLVLMLNSENSTSTRTAV 386
>ref|NP_008889.1| zinc finger protein 16 (KOX 9) [Homo sapiens]
gb|AAF75235.1|AF244088_1 (AF244088) zinc finger protein [Homo sapiens]
Length = 671
Score = 30.8 bits (68), Expect = 6.2
Identities = 16/34 (47%), Positives = 27/34 (79%), Gaps = 18/34 (52%)
Frame = +2
Query: 80 RHNKTHT-----LCRRCGR---RSLHIQKH----------ECSSCGYPSAKI 181
+H++THT C CG+ +S H++KH EC+ CG P +++
Sbjct: 355 KHHRTHTGEKPFECGECGKAFSQSAHLRKHQRVHTGEKPYECNDCGKPFSRV 406
>pir||T01547 probable phospholipase D (EC 3.1.4.4) A_IG005I10.13 - Arabidopsis
thaliana
gb|AAB62845.1| (AF013293) Similar to phospholipase D [Arabidopsis thaliana]
gb|AAF02803.1|AF195115_23 (AF195115) Similar to phospholipase D; F5I10.13 [Arabidopsis
thaliana]
emb|CAB80782.1| (AL161471) phospholipase D-like protein [Arabidopsis thaliana]
Length = 833
Score = 30.8 bits (68), Expect = 6.2
Identities = 24/70 (34%), Positives = 35/70 (49%), Gaps = 4/70 (5%)
Frame = -3
Query: 541 HEPTNTAARPSHRLAPVPTIFPYGLSSRYERAVIVDVCVLEGMGVSNVRDRRGVGPERW- 365
++P +T AR + P I+ Y +S E ++D C +E + VR R V E W
Sbjct: 720 YQPQHTWAR--RQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAEENWE 777
Query: 364 -WRGSE--GMRSHL 332
+R E MR HL
Sbjct: 778 QFRSEEVSEMRGHL 791
>ref|XP_011670.1| zinc finger protein 16 (KOX 9) [Homo sapiens]
Length = 683
Score = 30.8 bits (68), Expect = 6.2
Identities = 16/34 (47%), Positives = 27/34 (79%), Gaps = 18/34 (52%)
Frame = +2
Query: 80 RHNKTHT-----LCRRCGR---RSLHIQKH----------ECSSCGYPSAKI 181
+H++THT C CG+ +S H++KH EC+ CG P +++
Sbjct: 367 KHHRTHTGEKPFECGECGKAFSQSAHLRKHQRVHTGEKPYECNDCGKPFSRV 418
>gb|AAG20155.1| (AE005093) Vng1983h [Halobacterium sp. NRC-1]
Length = 494
Score = 30.4 bits (67), Expect = 8.0
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Frame = +3
Query: 90 RRTPCADDAVAALSTSRSMSALLAVTLLPRSASTTG--------PRRLSEERPSVPAALA 245
RR DA+ + R A+L + R G PR + RP++
Sbjct: 194 RRLVALQDALGPRAGDRGHGAVLPPEVRLRVPRVRGRPVAVDLRPRGRRDTRPALDPGRT 253
Query: 246 TSRMCPDDSRTVSRLAHPRALVALLPRRPKWDRIPSD 356
+R P+ R R+ PR + P R DRIP D
Sbjct: 254 AARDRPERPRRRPRVGGPRRPLVRRPLRHLVDRIPRD 290
>gb|AAC23679.1| (AF068751) serine/threonine protein phosphatase I [Leishmania
major]
Length = 104
Score = 30.4 bits (67), Expect = 8.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 211 AKKDRRYRPHSLPQGCVPTIQERFPDWHTQGRSWPYCRE 327
A DRR R H L Q P+++ F + RSW RE
Sbjct: 65 ASDDRRQRAHVLFQILKPSVKSEFSSYRDVSRSWEMRRE 103
>ref|NP_036252.1| CD2-associated protein [Homo sapiens]
ref|XP_011474.2| CD2-associated protein [Homo sapiens]
pir||T13151 adapter protein CMS - human
gb|AAD34595.1|AF146277_1 (AF146277) adapter protein CMS [Homo sapiens]
gb|AAF80495.1|AF164377_1 (AF164377) CD2AP homolog [Homo sapiens]
Length = 639
Score = 30.4 bits (67), Expect = 8.0
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 213 EERPSVPAALATSRMCPDDSRTVSRLAHPRALVALLPRRPKWDRIPSDPLHHLSGPTPLL 392
E++PS PAA P S L R+ + P+RP+ P P+ ++G +
Sbjct: 376 EQKPSKPAAPQVPPKKPTPPTKASNLL--RSSGTVYPKRPEKPVPPPPPIAKINGEVSSI 433
Query: 393 SRTFET 410
S FET
Sbjct: 434 SSKFET 439
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,134,629
Number of Sequences: 705144
Number of extensions: 5222905
Number of successful extensions: 18240
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 17261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18201
length of database: 222,175,239
effective HSP length: 111
effective length of database: 143,904,255
effective search space used: 10361106360
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)