The query sequence for this search has been filtered. Filtering
eliminates low complexity regions that commonly give spuriously high
scores that reflect compositional bias rather than significant
position-by-position alignment. Filtering can eliminate these potentially
confounding matches (e.g., hits against proline-rich regions or poly-A
tails) from the blast reports, leaving regions whose blast statistics
reflect the specificity of their pairwise alignment.
BLASTX 2.2.1 [Apr-13-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1606_F04_K08ZS5.seq 1606_F04_K08ZS5 0 0 0 1 448
(448 letters)
Database: nr
705,144 sequences; 222,175,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
pir||T00323 chitinase (EC 3.2.1.14) B - Clostridium paraput... 33 0.94
gb|AAF49813.1| (AE003537) CG10133 gene product [Drosophila ... 32 1.2
gb|AAF27019.1|AC009177_9 (AC009177) hypothetical protein [A... 31 3.6
pir||T46740 microfilarial sheath protein SHP3 [imported] - ... 31 3.6
dbj|BAB23719.1| (AK004984) putative [Mus musculus] 31 3.6
emb|CAC12499.1| (AL445067) conserved hypothetical protein [... 30 4.7
emb|CAA93628.1| (Z69782) hypothetical protein [Anaerocellum... 30 4.7
pir||S16872 cytochrome P450 2D3 - rat >gi|57814|emb|CAA3627... 30 6.1
sp|P12938|CPD3_RAT CYTOCHROME P450 2D3 (CYPIID3) (P450-DB3)... 30 6.1
gb|AAC04878.1| (AF047334) microtubular associated protein C... 30 6.1
ref|NP_073310.1| UL17 tegument protein [Meleagrid herpesvir... 30 8.0
gb|AAG30056.1|AF282130_19 (AF282130) UL17 [Meleagrid herpes... 30 8.0
pir||I51657 suppressor of yeast mitotic catastrophe - Afric... 30 8.0
>pir||T00323 chitinase (EC 3.2.1.14) B - Clostridium paraputrificum
dbj|BAA23796.1| (AB001874) chitinase B [Clostridium paraputrificum]
Length = 831
Score = 32.7 bits (73), Expect = 0.94
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = -3
Query: 395 TSHQSVWGASEPAPLFTDPLLTSTDETRAERGPIFTKSNVRALQRTGPIVKEPQLGG 225
T + W S AP +P E G FT NVR++Q VKE LGG
Sbjct: 394 TGLKEYWDDSAKAPYLYNP----------ETGAFFTYDNVRSIQEKAKYVKENNLGG 440
>gb|AAF49813.1| (AE003537) CG10133 gene product [Drosophila melanogaster]
Length = 316
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = +3
Query: 36 SPRGRANGQSTEQREDDMDAPTAVEVQLSELNRKIDQLTAAVLVMQEK 179
+P G A+G +T+ ++ P +++LSE+ R++D T AV +Q++
Sbjct: 80 TPNGYADGLATQNGQEYFVLPLETKMKLSEVVRRLDDPTGAVHYIQKQ 127
>gb|AAF27019.1|AC009177_9 (AC009177) hypothetical protein [Arabidopsis thaliana]
Length = 634
Score = 30.8 bits (68), Expect = 3.6
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 33 ASPRGRANGQSTEQREDDMDAPTAVEVQLSELNRKIDQLTAAVLVMQE 176
+S +G+ Q + ++ + + + E +L ELNRK D+LT AV V+Q+
Sbjct: 364 SSDKGKLIDQLSREKVELEERIFSRERKLVELNRKADELTHAVAVLQK 411
>pir||T46740 microfilarial sheath protein SHP3 [imported] - Litomosoides
sigmodontis
gb|AAB82017.2| (U54556) microfilarial sheath protein SHP3 [Litomosoides
sigmodontis]
Length = 354
Score = 30.8 bits (68), Expect = 3.6
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 332 TSTDETRAERGPIFTKSNVRALQRTGPIVKEPQLGGGGTRIRAFTTAS 189
TST G TKS + TGP + G G T++R TT+S
Sbjct: 266 TSTTSVSTTSGT--TKSTTSMISTTGPSISTTPAGTGSTKVRTSTTSS 311
>dbj|BAB23719.1| (AK004984) putative [Mus musculus]
Length = 187
Score = 30.8 bits (68), Expect = 3.6
Identities = 19/79 (24%), Positives = 32/79 (40%)
Frame = -3
Query: 404 RLSTSHQSVWGASEPAPLFTDPLLTSTDETRAERGPIFTKSNVRALQRTGPIVKEPQLGG 225
+L T H+ W +P TD + + + F ++N+R +V GG
Sbjct: 94 KLVTEHKRTWDPDQPPRDLTDAFMAEMETAKGNPESSFNEANLR-------LVVLDLFGG 146
Query: 224 GGTRIRAFTTASTCLLLLH 168
G A T + L++LH
Sbjct: 147 GIVTTSATLTWALLLMILH 165
>emb|CAC12499.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 463
Score = 30.4 bits (67), Expect = 4.7
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -3
Query: 251 IVKEPQLGGGGTRIRAFTTASTCLLLLHHQNSCSELVNLAVQLAKLHLHGSW 96
IV LGG G I T A+ +LL+H L+N+++ + +HLH S+
Sbjct: 355 IVSAAVLGGFGAFIMTATAATLGVLLVH------ALINISLPASDMHLHRSF 400
>emb|CAA93628.1| (Z69782) hypothetical protein [Anaerocellum thermophilum]
Length = 354
Score = 30.4 bits (67), Expect = 4.7
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Frame = +1
Query: 4 LPLLWAAQHLHLLE-----VEQTVRVLSSVRMIWTPQLPWRCSLAS-*TARLTNSLQLFW 165
+PLL L L+E +E+TV+VLS +R + P++P +LA T +L N L + +
Sbjct: 158 IPLLMLFVKLGLIEPVDDQIEETVKVLSDLRERYKPEVPEEKNLAKRLTLKLWNKLPIIY 217
>pir||S16872 cytochrome P450 2D3 - rat
emb|CAA36270.1| (X52028) cytochrome P450 IID3 protein [Rattus norvegicus]
gb|AAA41002.1| (J02868) cytochrome P-450 IID3 [Rattus norvegicus]
Length = 500
Score = 30.0 bits (66), Expect = 6.1
Identities = 19/83 (22%), Positives = 30/83 (35%)
Frame = -3
Query: 401 LSTSHQSVWGASEPAPLFTDPLLTSTDETRAERGPIFTKSNVRALQRTGPIVKEPQLGGG 222
L T H+ W +P TD L ++ + F +N+R +V G G
Sbjct: 257 LVTEHKKTWDPDQPPRDLTDAFLAEIEKAKGNPESSFNDANLR-------LVVNDLFGAG 309
Query: 221 GTRIRAFTTASTCLLLLHHQNSC 153
T + L++LH C
Sbjct: 310 MVTTSITLTWALLLMILHPDVQC 332
>sp|P12938|CPD3_RAT CYTOCHROME P450 2D3 (CYPIID3) (P450-DB3) (DEBRISOQUINE
4-HYDROXYLASE)
dbj|BAA23124.1| (AB008424) CYP2D3 [Rattus norvegicus]
Length = 500
Score = 30.0 bits (66), Expect = 6.1
Identities = 19/83 (22%), Positives = 30/83 (35%)
Frame = -3
Query: 401 LSTSHQSVWGASEPAPLFTDPLLTSTDETRAERGPIFTKSNVRALQRTGPIVKEPQLGGG 222
L T H+ W +P TD L ++ + F +N+R +V G G
Sbjct: 257 LVTEHKKTWDPDQPPRDLTDAFLAEIEKAKGNPESSFNDANLR-------LVVNDLFGAG 309
Query: 221 GTRIRAFTTASTCLLLLHHQNSC 153
T + L++LH C
Sbjct: 310 MVTTSITLTWALLLMILHPDVQC 332
>gb|AAC04878.1| (AF047334) microtubular associated protein CP60 [Drosophila
heteroneura]
Length = 142
Score = 30.0 bits (66), Expect = 6.1
Identities = 23/70 (32%), Positives = 33/70 (46%), Gaps = 4/70 (5%)
Frame = -3
Query: 389 HQSVWGASEPAPLFTDPLLTSTDETRAERGPIFTKSNVR----ALQRTGPIVKEPQLGGG 222
H + P P F + L +T + +R S V ALQ+ G +K+ GGG
Sbjct: 12 HANKPNVDTPRPAFEEKKLLNTMASNPQRSSGQQASAVSVAAAALQKKGITLKKTPSGGG 71
Query: 221 GTRIRAFTTASTCL 180
G + A T A+T L
Sbjct: 72 GHKSPATTAAATQL 85
>ref|NP_073310.1| UL17 tegument protein [Meleagrid herpesvirus 1]
gb|AAG45754.1|AF291866_21 (AF291866) UL17 tegument protein [Meleagrid herpesvirus 1]
Length = 728
Score = 29.6 bits (65), Expect = 8.0
Identities = 21/76 (27%), Positives = 35/76 (45%), Gaps = 1/76 (1%)
Frame = -3
Query: 356 PLFTDPLLTSTDETRAERGPI-FTKSNVRALQRTGPIVKEPQLGGGGTRIRAFTTASTCL 180
P D LLT+ P + RAL PI+ P L G +IRAF++++
Sbjct: 435 PTSLDNLLTTACMDEGVNHPSNLSLQRKRALATAAPILHNPLLNETGNQIRAFSSSAETE 494
Query: 179 LLLHHQNSCSELVNLAV 129
L+++ + S + A+
Sbjct: 495 LMINFKIVTSNCIITAI 511
>gb|AAG30056.1|AF282130_19 (AF282130) UL17 [Meleagrid herpesvirus 1]
Length = 728
Score = 29.6 bits (65), Expect = 8.0
Identities = 21/76 (27%), Positives = 35/76 (45%), Gaps = 1/76 (1%)
Frame = -3
Query: 356 PLFTDPLLTSTDETRAERGPI-FTKSNVRALQRTGPIVKEPQLGGGGTRIRAFTTASTCL 180
P D LLT+ P + RAL PI+ P L G +IRAF++++
Sbjct: 435 PTSLDNLLTTACMDEGVNHPSNLSLQRKRALATAAPILHNPLLNETGNQIRAFSSSAETE 494
Query: 179 LLLHHQNSCSELVNLAV 129
L+++ + S + A+
Sbjct: 495 LMINFKIVTSNCIITAI 511
>pir||I51657 suppressor of yeast mitotic catastrophe - African clawed frog
gb|AAA20939.1| (U07608) suppressor of yeast mitotic catastrophe [Xenopus laevis]
Length = 741
Score = 29.6 bits (65), Expect = 8.0
Identities = 21/62 (33%), Positives = 31/62 (49%)
Frame = -3
Query: 395 TSHQSVWGASEPAPLFTDPLLTSTDETRAERGPIFTKSNVRALQRTGPIVKEPQLGGGGT 216
T +S+ +S+PA TD + T T +RG K NV L+ + +V E +L G
Sbjct: 116 TPRRSIRKSSKPADSSTDIIGNITLPTTPKRGLKKAKENVDTLKNSISVVPEEELTLGTR 175
Query: 215 RI 210
RI
Sbjct: 176 RI 177
Database: nr
Posted date: Jun 30, 2001 11:40 PM
Number of letters in database: 222,175,239
Number of sequences in database: 705,144
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.267 0.0410 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 197,567,240
Number of Sequences: 705144
Number of extensions: 3934025
Number of successful extensions: 12291
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12290
length of database: 222,175,239
effective HSP length: 107
effective length of database: 146,724,831
effective search space used: 6015718071
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)